RNA–Protein interactions for RNA: ENST00000301072.10

TUBA1C-201, Transcript of tubulin alpha 1c, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBA1C, Length 3,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1C-201ENST00000301072 HSPG2P98160 4391 aa9.07□□□□□ -0.96
TUBA1C-201ENST00000301072 TNXBP22105 4242 aa9□□□□□ -0.97
TUBA1C-201ENST00000301072 Q5VSD8 79 aa8.98□□□□□ -0.97
TUBA1C-201ENST00000301072 RYR1P21817 5038 aa8.97□□□□□ -0.97
TUBA1C-201ENST00000301072 LRP1Q07954 4544 aaKnown RBP8.96□□□□□ -0.97
TUBA1C-201ENST00000301072 IGKV2D-30A0A075B6S6 120 aa8.94□□□□□ -0.98
TUBA1C-201ENST00000301072 KRTAP10-8P60410 259 aa8.94□□□□□ -0.98
TUBA1C-201ENST00000301072 Q8N1X5 172 aa8.94□□□□□ -0.98
TUBA1C-201ENST00000301072 C9orf92A6NGG3 77 aa8.93□□□□□ -0.98
TUBA1C-201ENST00000301072 KRTAP17-1Q9BYP8 105 aa8.93□□□□□ -0.98
TUBA1C-201ENST00000301072 H0YAA0 97 aa8.92□□□□□ -0.98
TUBA1C-201ENST00000301072 TPRXLQ17RH7 258 aa8.91□□□□□ -0.98
TUBA1C-201ENST00000301072 FAT3Q8TDW7 4589 aa8.91□□□□□ -0.98
TUBA1C-201ENST00000301072 CAMK2N1Q7Z7J9 78 aa8.86□□□□□ -0.99
TUBA1C-201ENST00000301072 C10orf95Q9H7T3 257 aa8.83□□□□□ -1
TUBA1C-201ENST00000301072 KIAA1109Q2LD37 5005 aa8.82□□□□□ -1
TUBA1C-201ENST00000301072 EPPK1P58107 5090 aaKnown RBP8.77□□□□□ -1
TUBA1C-201ENST00000301072 MYCBP2O75592 4640 aa8.75□□□□□ -1.01
TUBA1C-201ENST00000301072 MT1HL1P0DM35 61 aa8.74□□□□□ -1.01
TUBA1C-201ENST00000301072 KRTAP3-1Q9BYR8 98 aa8.65□□□□□ -1.02
TUBA1C-201ENST00000301072 A0A1B0GU33 70 aa8.64□□□□□ -1.03
TUBA1C-201ENST00000301072 RPL37P61927 97 aaKnown RBP8.62□□□□□ -1.03
TUBA1C-201ENST00000301072 XP32Q5T750 250 aa8.62□□□□□ -1.03
TUBA1C-201ENST00000301072 DMBT1Q9UGM3 2413 aaPredicted RBP8.62□□□□□ -1.03
TUBA1C-201ENST00000301072 COX6B2Q6YFQ2 88 aa8.53□□□□□ -1.04
TUBA1C-201ENST00000301072 KRTAP4-5Q9BYR2 181 aa8.53□□□□□ -1.04
TUBA1C-201ENST00000301072 H1FX-AS1Q4G0G2 97 aa8.48□□□□□ -1.05
TUBA1C-201ENST00000301072 ABCA13Q86UQ4 5058 aa8.42□□□□□ -1.06
TUBA1C-201ENST00000301072 LRP2P98164 4655 aa8.37□□□□□ -1.07
TUBA1C-201ENST00000301072 LPAP08519 4548 aa8.37□□□□□ -1.07
TUBA1C-201ENST00000301072 KRTAP3-3Q9BYR6 98 aa8.32□□□□□ -1.08
TUBA1C-201ENST00000301072 R4GN34 69 aa8.29□□□□□ -1.08
TUBA1C-201ENST00000301072 PRO2289Q9P1D8 64 aa8.27□□□□□ -1.09
TUBA1C-201ENST00000301072 HERC2O95714 4834 aa8.26□□□□□ -1.09
TUBA1C-201ENST00000301072 S4R3F8 94 aa8.23□□□□□ -1.09
TUBA1C-201ENST00000301072 PLAC4Q8WY50 150 aa8.23□□□□□ -1.09
TUBA1C-201ENST00000301072 BIRC6Q9NR09 4857 aa8.22□□□□□ -1.09
TUBA1C-201ENST00000301072 A0A0D9SG42 100 aa8.21□□□□□ -1.09
TUBA1C-201ENST00000301072 KRTAP10-6P60371 365 aaPredicted RBP8.13□□□□□ -1.11
TUBA1C-201ENST00000301072 KRTAP3-2Q9BYR7 98 aa8.11□□□□□ -1.11
TUBA1C-201ENST00000301072 KRTAP23-1A1A580 65 aa8.1□□□□□ -1.11
TUBA1C-201ENST00000301072 MUC17Q685J3 4493 aa8.09□□□□□ -1.11
TUBA1C-201ENST00000301072 KRTAP4-1Q9BYQ7 146 aa8.02□□□□□ -1.13
TUBA1C-201ENST00000301072 KRTAP13-4Q3LI77 160 aa7.98□□□□□ -1.13
TUBA1C-201ENST00000301072 PCLOQ9Y6V0 5065 aa7.92□□□□□ -1.14
TUBA1C-201ENST00000301072 KRTAP19-2Q3LHN2 52 aa7.9□□□□□ -1.14
TUBA1C-201ENST00000301072 HERC1Q15751 4861 aa7.86□□□□□ -1.15
TUBA1C-201ENST00000301072 HMCN2Q8NDA2 5059 aa7.82□□□□□ -1.16
TUBA1C-201ENST00000301072 KRTAP12-2P59991 146 aa7.79□□□□□ -1.16
TUBA1C-201ENST00000301072 MUC2Q02817 5179 aa7.77□□□□□ -1.17
TUBA1C-201ENST00000301072 M0QZ58 72 aa7.76□□□□□ -1.17
TUBA1C-201ENST00000301072 FLGP20930 4061 aaPredicted RBP7.67□□□□□ -1.18
TUBA1C-201ENST00000301072 KRTAP12-1P59990 96 aa7.67□□□□□ -1.18
TUBA1C-201ENST00000301072 INE1O15225 51 aa7.64□□□□□ -1.19
TUBA1C-201ENST00000301072 LORP23490 312 aaPredicted RBP7.61□□□□□ -1.19
TUBA1C-201ENST00000301072 LCE2CQ5TA81 110 aa7.54□□□□□ -1.2
TUBA1C-201ENST00000301072 FAT4Q6V0I7 4981 aa7.42□□□□□ -1.22
TUBA1C-201ENST00000301072 UBR4Q5T4S7 5183 aa7.41□□□□□ -1.22
TUBA1C-201ENST00000301072 RNF213Q63HN8 5207 aa7.39□□□□□ -1.23
TUBA1C-201ENST00000301072 MT1HP80294 61 aa7.33□□□□□ -1.24
TUBA1C-201ENST00000301072 M0R2T5 61 aa7.21□□□□□ -1.25
TUBA1C-201ENST00000301072 PP632Q6XCG6 107 aa7.21□□□□□ -1.25
TUBA1C-201ENST00000301072 SPRR2GQ9BYE4 73 aa7.18□□□□□ -1.26
TUBA1C-201ENST00000301072 SPRR5A0A1B0GTR4 108 aa7.15□□□□□ -1.26
TUBA1C-201ENST00000301072 KRTAP19-1Q8IUB9 90 aa7.14□□□□□ -1.27
TUBA1C-201ENST00000301072 KRTAP9-8Q9BYQ0 159 aa7.13□□□□□ -1.27
TUBA1C-201ENST00000301072 MT2AP02795 61 aa7.13□□□□□ -1.27
TUBA1C-201ENST00000301072 MT1FP04733 61 aa7.11□□□□□ -1.27
TUBA1C-201ENST00000301072 KRTAP10-10P60014 251 aa7.04□□□□□ -1.28
TUBA1C-201ENST00000301072 KRTAP19-8Q3LI54 63 aa6.92□□□□□ -1.3
TUBA1C-201ENST00000301072 TNP1P09430 55 aa6.87□□□□□ -1.31
TUBA1C-201ENST00000301072 KRTAP9-3Q9BYQ3 159 aa6.85□□□□□ -1.31
TUBA1C-201ENST00000301072 MT1BP07438 61 aa6.82□□□□□ -1.32
TUBA1C-201ENST00000301072 LCE2AQ5TA79 106 aaPredicted RBP6.76□□□□□ -1.33
TUBA1C-201ENST00000301072 KRTAP10-5P60370 271 aa6.7□□□□□ -1.34
TUBA1C-201ENST00000301072 MT1XP80297 61 aa6.7□□□□□ -1.34
TUBA1C-201ENST00000301072 LCE2BO14633 110 aa6.6□□□□□ -1.35
TUBA1C-201ENST00000301072 LCE3AQ5TA76 89 aa6.57□□□□□ -1.36
TUBA1C-201ENST00000301072 KRTAP10-7P60409 375 aaPredicted RBP6.46□□□□□ -1.38
TUBA1C-201ENST00000301072 KRTAP8-1Q8IUC2 63 aa6.45□□□□□ -1.38
TUBA1C-201ENST00000301072 KRTAP10-12P60413 245 aa6.43□□□□□ -1.38
TUBA1C-201ENST00000301072 USH2AO75445 5202 aa6.38□□□□□ -1.39
TUBA1C-201ENST00000301072 KRTAP12-3P60328 96 aa6.28□□□□□ -1.4
TUBA1C-201ENST00000301072 SSPOA2VEC9 5147 aa6.16□□□□□ -1.42
TUBA1C-201ENST00000301072 KRTAP19-5Q3LI72 72 aa6.12□□□□□ -1.43
TUBA1C-201ENST00000301072 KRTAP4-8A0A0G2JLE6 195 aa6.11□□□□□ -1.43
TUBA1C-201ENST00000301072 KRTAP4-8Q9BYQ9 185 aa6.11□□□□□ -1.43
TUBA1C-201ENST00000301072 KMT2DO14686 5537 aa6.1□□□□□ -1.43
TUBA1C-201ENST00000301072 KRTAP19-6Q3LI70 58 aa6.07□□□□□ -1.44
TUBA1C-201ENST00000301072 KRTAP2-2Q9BYT5 123 aa5.99□□□□□ -1.45
TUBA1C-201ENST00000301072 KRTAP19-7Q3SYF9 63 aa5.98□□□□□ -1.45
TUBA1C-201ENST00000301072 LCE2DQ5TA82 110 aaPredicted RBP5.95□□□□□ -1.46
TUBA1C-201ENST00000301072 LCE3CQ5T5A8 94 aa5.91□□□□□ -1.46
TUBA1C-201ENST00000301072 FSIP2Q5CZC0 6907 aa5.86□□□□□ -1.47
TUBA1C-201ENST00000301072 MT1EP04732 61 aa5.82□□□□□ -1.48
TUBA1C-201ENST00000301072 LCE1AQ5T7P2 110 aa5.8□□□□□ -1.48
TUBA1C-201ENST00000301072 MT1LQ93083 61 aa5.77□□□□□ -1.49
TUBA1C-201ENST00000301072 KRTAP19-4Q3LI73 84 aa5.76□□□□□ -1.49
TUBA1C-201ENST00000301072 FCGBPQ9Y6R7 5405 aaPredicted RBP5.73□□□□□ -1.49
TUBA1C-201ENST00000301072 LCE1EQ5T753 118 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms