RNA–Protein interactions for RNA: ENST00000299572.9

CENPN-201, Transcript of centromere protein N, humanhuman

TSL 1 (best) BASIC

Gene CENPN, Length 1,398 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CENPN-201ENST00000299572 KRTAP19-1Q8IUB9 90 aa9.92□□□□□ -0.82
CENPN-201ENST00000299572 KLKP1Q107X0 134 aa9.9□□□□□ -0.82
CENPN-201ENST00000299572 FCGBPQ9Y6R7 5405 aaPredicted RBP9.87□□□□□ -0.83
CENPN-201ENST00000299572 C20orf197Q8N268 126 aa9.85□□□□□ -0.83
CENPN-201ENST00000299572 SNURFQ9Y675 71 aa9.85□□□□□ -0.83
CENPN-201ENST00000299572 COX7CP15954 63 aa9.84□□□□□ -0.83
CENPN-201ENST00000299572 H1FX-AS1Q4G0G2 97 aa9.84□□□□□ -0.83
CENPN-201ENST00000299572 ANAPC13Q9BS18 74 aa9.84□□□□□ -0.83
CENPN-201ENST00000299572 KRTAP3-1Q9BYR8 98 aa9.82□□□□□ -0.84
CENPN-201ENST00000299572 KRTAP19-6Q3LI70 58 aa9.69□□□□□ -0.86
CENPN-201ENST00000299572 A8MUN3 132 aa9.67□□□□□ -0.86
CENPN-201ENST00000299572 S4R3F8 94 aa9.63□□□□□ -0.87
CENPN-201ENST00000299572 CCDC179H3BU77 68 aa9.62□□□□□ -0.87
CENPN-201ENST00000299572 DMAC1Q96GE9 116 aa9.61□□□□□ -0.87
CENPN-201ENST00000299572 NDUFC1O43677 76 aa9.6□□□□□ -0.87
CENPN-201ENST00000299572 MACF1Q9UPN3 7388 aaKnown RBP9.58□□□□□ -0.88
CENPN-201ENST00000299572 LCA10Q71F78 164 aa9.58□□□□□ -0.88
CENPN-201ENST00000299572 SPANXA2-OT1Q8N9U9 137 aa9.57□□□□□ -0.88
CENPN-201ENST00000299572 CYSTM1Q9H1C7 97 aa9.57□□□□□ -0.88
CENPN-201ENST00000299572 ACYP2P14621 99 aa9.55□□□□□ -0.88
CENPN-201ENST00000299572 H7BZZ5 65 aa9.53□□□□□ -0.88
CENPN-201ENST00000299572 CSAG1Q6PB30 78 aa9.52□□□□□ -0.88
CENPN-201ENST00000299572 SYNE2Q8WXH0 6885 aaKnown RBP9.5□□□□□ -0.89
CENPN-201ENST00000299572 KRTAP3-3Q9BYR6 98 aa9.5□□□□□ -0.89
CENPN-201ENST00000299572 CHKB-CPT1BH3BT56 60 aa9.39□□□□□ -0.91
CENPN-201ENST00000299572 KRTAP6-3Q3LI67 103 aa9.35□□□□□ -0.91
CENPN-201ENST00000299572 SPTSSBQ8NFR3 76 aa9.31□□□□□ -0.92
CENPN-201ENST00000299572 PCP4P48539 62 aa9.3□□□□□ -0.92
CENPN-201ENST00000299572 COA5Q86WW8 74 aa9.3□□□□□ -0.92
CENPN-201ENST00000299572 ATP5EP56381 51 aaPredicted RBP9.25□□□□□ -0.93
CENPN-201ENST00000299572 TMEM258P61165 79 aa9.25□□□□□ -0.93
CENPN-201ENST00000299572 MT1BP07438 61 aa9.19□□□□□ -0.94
CENPN-201ENST00000299572 A6NN06 94 aa9.18□□□□□ -0.94
CENPN-201ENST00000299572 Q5VV11 94 aa9.18□□□□□ -0.94
CENPN-201ENST00000299572 H0YAA0 97 aa9.17□□□□□ -0.94
CENPN-201ENST00000299572 ADM2Q7Z4H4 148 aa9.17□□□□□ -0.94
CENPN-201ENST00000299572 SPRR2GQ9BYE4 73 aa9.15□□□□□ -0.94
CENPN-201ENST00000299572 KRTAP19-8Q3LI54 63 aa9.13□□□□□ -0.95
CENPN-201ENST00000299572 KRTAP3-2Q9BYR7 98 aa9.03□□□□□ -0.96
CENPN-201ENST00000299572 P0C880 135 aa9.02□□□□□ -0.97
CENPN-201ENST00000299572 KRTAP10-5P60370 271 aa9.02□□□□□ -0.97
CENPN-201ENST00000299572 CRIPTQ9P021 101 aa8.99□□□□□ -0.97
CENPN-201ENST00000299572 SERP1Q9Y6X1 66 aa8.99□□□□□ -0.97
CENPN-201ENST00000299572 SEC61GP60059 68 aa8.96□□□□□ -0.98
CENPN-201ENST00000299572 NEBP20929 6669 aa8.95□□□□□ -0.98
CENPN-201ENST00000299572 R4GN34 69 aa8.87□□□□□ -0.99
CENPN-201ENST00000299572 MUC12Q9UKN1 5478 aa8.86□□□□□ -0.99
CENPN-201ENST00000299572 A0A1B0GU69 56 aa8.85□□□□□ -0.99
CENPN-201ENST00000299572 M0QZ58 72 aa8.84□□□□□ -0.99
CENPN-201ENST00000299572 KRTAP5-9P26371 169 aa8.84□□□□□ -0.99
CENPN-201ENST00000299572 LINC01558Q9Y6Z2 57 aa8.79□□□□□ -1
CENPN-201ENST00000299572 KRTAP20-1Q3LI63 56 aa8.77□□□□□ -1.01
CENPN-201ENST00000299572 RPS28P62857 69 aaKnown RBP8.75□□□□□ -1.01
CENPN-201ENST00000299572 PRR15LQ9BU68 103 aa8.75□□□□□ -1.01
CENPN-201ENST00000299572 A0A1B0GU33 70 aa8.73□□□□□ -1.01
CENPN-201ENST00000299572 LINC01554Q52M75 96 aa8.72□□□□□ -1.01
CENPN-201ENST00000299572 SMIM26A0A096LP01 95 aa8.7□□□□□ -1.02
CENPN-201ENST00000299572 KMT2DO14686 5537 aa8.68□□□□□ -1.02
CENPN-201ENST00000299572 V9GYY9 64 aa8.66□□□□□ -1.02
CENPN-201ENST00000299572 KRTAP13-4Q3LI77 160 aa8.65□□□□□ -1.02
CENPN-201ENST00000299572 Q1T7F1 81 aa8.62□□□□□ -1.03
CENPN-201ENST00000299572 PRO2289Q9P1D8 64 aa8.62□□□□□ -1.03
CENPN-201ENST00000299572 SPATA8Q6RVD6 105 aa8.61□□□□□ -1.03
CENPN-201ENST00000299572 MDN1Q9NU22 5596 aa8.59□□□□□ -1.03
CENPN-201ENST00000299572 PLAC4Q8WY50 150 aa8.58□□□□□ -1.04
CENPN-201ENST00000299572 MT1XP80297 61 aa8.56□□□□□ -1.04
CENPN-201ENST00000299572 PSPHP1O15172 72 aa8.54□□□□□ -1.04
CENPN-201ENST00000299572 SPRR2FQ96RM1 72 aa8.53□□□□□ -1.04
CENPN-201ENST00000299572 A0A0D9SG42 100 aa8.52□□□□□ -1.05
CENPN-201ENST00000299572 KRTAP2-3P0C7H8 128 aa8.48□□□□□ -1.05
CENPN-201ENST00000299572 KRTAP2-4Q9BYR9 128 aa8.48□□□□□ -1.05
CENPN-201ENST00000299572 UQCR11O14957 56 aa8.47□□□□□ -1.05
CENPN-201ENST00000299572 SPRR2EP22531 72 aa8.46□□□□□ -1.06
CENPN-201ENST00000299572 SPRR2BP35325 72 aa8.46□□□□□ -1.06
CENPN-201ENST00000299572 SPRR2AP35326 72 aa8.46□□□□□ -1.06
CENPN-201ENST00000299572 KRTAP8-1Q8IUC2 63 aa8.44□□□□□ -1.06
CENPN-201ENST00000299572 A8MU10 97 aa8.41□□□□□ -1.06
CENPN-201ENST00000299572 KRTAP12-2P59991 146 aa8.4□□□□□ -1.06
CENPN-201ENST00000299572 SPINT4Q6UDR6 99 aa8.38□□□□□ -1.07
CENPN-201ENST00000299572 MIR22HGQ0VDD5 57 aa8.35□□□□□ -1.07
CENPN-201ENST00000299572 KRTAP12-1P59990 96 aa8.3□□□□□ -1.08
CENPN-201ENST00000299572 LCE1AQ5T7P2 110 aa8.3□□□□□ -1.08
CENPN-201ENST00000299572 A6NED7 52 aa8.29□□□□□ -1.08
CENPN-201ENST00000299572 CAMK2N1Q7Z7J9 78 aa8.28□□□□□ -1.08
CENPN-201ENST00000299572 KRTAP4-8A0A0G2JLE6 195 aa8.24□□□□□ -1.09
CENPN-201ENST00000299572 KRTAP4-8Q9BYQ9 185 aa8.24□□□□□ -1.09
CENPN-201ENST00000299572 SPRR2DP22532 72 aa8.19□□□□□ -1.1
CENPN-201ENST00000299572 KRTAP2-2Q9BYT5 123 aa8.19□□□□□ -1.1
CENPN-201ENST00000299572 KRTAP2-1Q9BYU5 128 aa8.19□□□□□ -1.1
CENPN-201ENST00000299572 KRTAP10-7P60409 375 aaPredicted RBP8.16□□□□□ -1.1
CENPN-201ENST00000299572 KRTAP10-12P60413 245 aa8.12□□□□□ -1.11
CENPN-201ENST00000299572 K7ERS5 55 aa8.09□□□□□ -1.12
CENPN-201ENST00000299572 CDC42SE1Q9NRR8 79 aa8.01□□□□□ -1.13
CENPN-201ENST00000299572 LCE3BQ5TA77 95 aa7.97□□□□□ -1.13
CENPN-201ENST00000299572 C10orf95Q9H7T3 257 aa7.91□□□□□ -1.14
CENPN-201ENST00000299572 BRK1Q8WUW1 75 aa7.82□□□□□ -1.16
CENPN-201ENST00000299572 TNP1P09430 55 aa7.79□□□□□ -1.16
CENPN-201ENST00000299572 KRTAP19-7Q3SYF9 63 aa7.65□□□□□ -1.18
CENPN-201ENST00000299572 ROMO1P60602 79 aa7.63□□□□□ -1.19
CENPN-201ENST00000299572 LCE5AQ5TCM9 118 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 103.1 ms