RNA–Protein interactions for RNA: ENST00000299238.6

HPS6-201, Transcript of HPS6, biogenesis of lysosomal organelles complex 2 subunit 3, humanhuman

APPRIS P1 BASIC

Gene HPS6, Length 2,649 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS6-201ENST00000299238 LRP1Q07954 4544 aaKnown RBP10.72□□□□□ -0.69
HPS6-201ENST00000299238 TNXBP22105 4242 aa10.71□□□□□ -0.69
HPS6-201ENST00000299238 TPRXLQ17RH7 258 aa10.7□□□□□ -0.7
HPS6-201ENST00000299238 DMBT1Q9UGM3 2413 aaPredicted RBP10.69□□□□□ -0.7
HPS6-201ENST00000299238 K7ERS5 55 aa10.68□□□□□ -0.7
HPS6-201ENST00000299238 RYR3Q15413 4870 aa10.68□□□□□ -0.7
HPS6-201ENST00000299238 Q5VSD8 79 aa10.67□□□□□ -0.7
HPS6-201ENST00000299238 KRTAP3-1Q9BYR8 98 aa10.67□□□□□ -0.7
HPS6-201ENST00000299238 FAT3Q8TDW7 4589 aa10.67□□□□□ -0.7
HPS6-201ENST00000299238 C10orf95Q9H7T3 257 aa10.63□□□□□ -0.71
HPS6-201ENST00000299238 A0A0A0MQY5 61 aa10.61□□□□□ -0.71
HPS6-201ENST00000299238 KRTAP10-8P60410 259 aa10.61□□□□□ -0.71
HPS6-201ENST00000299238 KRTAP15-1Q3LI76 137 aa10.61□□□□□ -0.71
HPS6-201ENST00000299238 COX6B2Q6YFQ2 88 aa10.61□□□□□ -0.71
HPS6-201ENST00000299238 RYR1P21817 5038 aa10.61□□□□□ -0.71
HPS6-201ENST00000299238 MYCBP2O75592 4640 aa10.56□□□□□ -0.72
HPS6-201ENST00000299238 KRTAP17-1Q9BYP8 105 aa10.5□□□□□ -0.73
HPS6-201ENST00000299238 A0A0D9SG42 100 aa10.46□□□□□ -0.74
HPS6-201ENST00000299238 KIAA1109Q2LD37 5005 aa10.44□□□□□ -0.74
HPS6-201ENST00000299238 RPL37P61927 97 aaKnown RBP10.43□□□□□ -0.74
HPS6-201ENST00000299238 KRTAP13-4Q3LI77 160 aa10.4□□□□□ -0.74
HPS6-201ENST00000299238 XP32Q5T750 250 aa10.36□□□□□ -0.75
HPS6-201ENST00000299238 MT1HL1P0DM35 61 aa10.35□□□□□ -0.75
HPS6-201ENST00000299238 EPPK1P58107 5090 aaKnown RBP10.29□□□□□ -0.76
HPS6-201ENST00000299238 KRTAP10-6P60371 365 aaPredicted RBP10.26□□□□□ -0.77
HPS6-201ENST00000299238 KRTAP3-3Q9BYR6 98 aa10.22□□□□□ -0.77
HPS6-201ENST00000299238 LPAP08519 4548 aa10.2□□□□□ -0.78
HPS6-201ENST00000299238 S4R3F8 94 aa10.11□□□□□ -0.79
HPS6-201ENST00000299238 KRTAP12-2P59991 146 aa10.11□□□□□ -0.79
HPS6-201ENST00000299238 KRTAP3-2Q9BYR7 98 aa10.11□□□□□ -0.79
HPS6-201ENST00000299238 LRP2P98164 4655 aa10.11□□□□□ -0.79
HPS6-201ENST00000299238 LUZP6Q538Z0 58 aa10.07□□□□□ -0.8
HPS6-201ENST00000299238 KRTAP4-5Q9BYR2 181 aa10.02□□□□□ -0.81
HPS6-201ENST00000299238 ABCA13Q86UQ4 5058 aa9.99□□□□□ -0.81
HPS6-201ENST00000299238 KRTAP12-1P59990 96 aa9.9□□□□□ -0.82
HPS6-201ENST00000299238 HERC2O95714 4834 aa9.71□□□□□ -0.86
HPS6-201ENST00000299238 PLAC4Q8WY50 150 aa9.7□□□□□ -0.86
HPS6-201ENST00000299238 J3QL48 77 aa9.7□□□□□ -0.86
HPS6-201ENST00000299238 SEC61BP60468 96 aaKnown RBP9.68□□□□□ -0.86
HPS6-201ENST00000299238 MUC17Q685J3 4493 aa9.65□□□□□ -0.87
HPS6-201ENST00000299238 M0QZ58 72 aa9.56□□□□□ -0.88
HPS6-201ENST00000299238 BIRC6Q9NR09 4857 aa9.56□□□□□ -0.88
HPS6-201ENST00000299238 KRTAP4-1Q9BYQ7 146 aa9.56□□□□□ -0.88
HPS6-201ENST00000299238 MUC2Q02817 5179 aa9.42□□□□□ -0.9
HPS6-201ENST00000299238 R4GN34 69 aa9.38□□□□□ -0.91
HPS6-201ENST00000299238 LORP23490 312 aaPredicted RBP9.37□□□□□ -0.91
HPS6-201ENST00000299238 KRTAP19-2Q3LHN2 52 aa9.37□□□□□ -0.91
HPS6-201ENST00000299238 PCLOQ9Y6V0 5065 aa9.24□□□□□ -0.93
HPS6-201ENST00000299238 HERC1Q15751 4861 aa9.23□□□□□ -0.93
HPS6-201ENST00000299238 HMCN2Q8NDA2 5059 aa9.19□□□□□ -0.94
HPS6-201ENST00000299238 FLGP20930 4061 aaPredicted RBP9.19□□□□□ -0.94
HPS6-201ENST00000299238 PP632Q6XCG6 107 aa8.97□□□□□ -0.97
HPS6-201ENST00000299238 FAT4Q6V0I7 4981 aa8.96□□□□□ -0.98
HPS6-201ENST00000299238 CAMK2N1Q7Z7J9 78 aa8.92□□□□□ -0.98
HPS6-201ENST00000299238 LCE2CQ5TA81 110 aa8.89□□□□□ -0.99
HPS6-201ENST00000299238 SPRR5A0A1B0GTR4 108 aa8.8□□□□□ -1
HPS6-201ENST00000299238 RNF213Q63HN8 5207 aa8.79□□□□□ -1
HPS6-201ENST00000299238 UBR4Q5T4S7 5183 aa8.76□□□□□ -1.01
HPS6-201ENST00000299238 PRO2289Q9P1D8 64 aa8.73□□□□□ -1.01
HPS6-201ENST00000299238 MT1HP80294 61 aa8.67□□□□□ -1.02
HPS6-201ENST00000299238 M0R2T5 61 aa8.66□□□□□ -1.02
HPS6-201ENST00000299238 SPRR2GQ9BYE4 73 aa8.58□□□□□ -1.04
HPS6-201ENST00000299238 KRTAP19-1Q8IUB9 90 aa8.55□□□□□ -1.04
HPS6-201ENST00000299238 TNP1P09430 55 aa8.51□□□□□ -1.05
HPS6-201ENST00000299238 MT2AP02795 61 aa8.49□□□□□ -1.05
HPS6-201ENST00000299238 MT1FP04733 61 aa8.48□□□□□ -1.05
HPS6-201ENST00000299238 KRTAP10-10P60014 251 aa8.44□□□□□ -1.06
HPS6-201ENST00000299238 KRTAP9-8Q9BYQ0 159 aa8.43□□□□□ -1.06
HPS6-201ENST00000299238 KRTAP23-1A1A580 65 aa8.43□□□□□ -1.06
HPS6-201ENST00000299238 INE1O15225 51 aa8.35□□□□□ -1.07
HPS6-201ENST00000299238 KRTAP19-8Q3LI54 63 aa8.24□□□□□ -1.09
HPS6-201ENST00000299238 LCE3AQ5TA76 89 aa8.16□□□□□ -1.1
HPS6-201ENST00000299238 MT1BP07438 61 aa8.15□□□□□ -1.11
HPS6-201ENST00000299238 KRTAP9-3Q9BYQ3 159 aa8.09□□□□□ -1.11
HPS6-201ENST00000299238 KRTAP10-5P60370 271 aa8.04□□□□□ -1.12
HPS6-201ENST00000299238 MT1XP80297 61 aa8.03□□□□□ -1.12
HPS6-201ENST00000299238 KRTAP8-1Q8IUC2 63 aa7.93□□□□□ -1.14
HPS6-201ENST00000299238 LCE2AQ5TA79 106 aaPredicted RBP7.83□□□□□ -1.16
HPS6-201ENST00000299238 KRTAP10-12P60413 245 aa7.82□□□□□ -1.16
HPS6-201ENST00000299238 USH2AO75445 5202 aa7.81□□□□□ -1.16
HPS6-201ENST00000299238 KRTAP10-7P60409 375 aaPredicted RBP7.81□□□□□ -1.16
HPS6-201ENST00000299238 LCE2BO14633 110 aa7.8□□□□□ -1.16
HPS6-201ENST00000299238 KRTAP12-3P60328 96 aa7.72□□□□□ -1.17
HPS6-201ENST00000299238 KMT2DO14686 5537 aa7.66□□□□□ -1.18
HPS6-201ENST00000299238 KRTAP19-5Q3LI72 72 aa7.45□□□□□ -1.22
HPS6-201ENST00000299238 KRTAP4-8A0A0G2JLE6 195 aa7.39□□□□□ -1.23
HPS6-201ENST00000299238 KRTAP4-8Q9BYQ9 185 aa7.39□□□□□ -1.23
HPS6-201ENST00000299238 SSPOA2VEC9 5147 aa7.28□□□□□ -1.24
HPS6-201ENST00000299238 LCE3CQ5T5A8 94 aa7.27□□□□□ -1.25
HPS6-201ENST00000299238 KRTAP9-6A8MVA2 160 aa7.17□□□□□ -1.26
HPS6-201ENST00000299238 KRTAP19-7Q3SYF9 63 aa7.16□□□□□ -1.26
HPS6-201ENST00000299238 FSIP2Q5CZC0 6907 aa7.15□□□□□ -1.26
HPS6-201ENST00000299238 KRTAP4-7Q9BYR0 210 aa7.09□□□□□ -1.27
HPS6-201ENST00000299238 KRTAP19-6Q3LI70 58 aa7.08□□□□□ -1.28
HPS6-201ENST00000299238 KRTAP2-3P0C7H8 128 aa7.04□□□□□ -1.28
HPS6-201ENST00000299238 KRTAP2-4Q9BYR9 128 aa7.04□□□□□ -1.28
HPS6-201ENST00000299238 KRTAP2-1Q9BYU5 128 aa7.04□□□□□ -1.28
HPS6-201ENST00000299238 MT1EP04732 61 aa6.98□□□□□ -1.29
HPS6-201ENST00000299238 MT1LQ93083 61 aa6.94□□□□□ -1.3
HPS6-201ENST00000299238 KRTAP19-4Q3LI73 84 aa6.9□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 122.3 ms