RNA–Protein interactions for RNA: ENST00000296824.3

CCDC127-201, Transcript of coiled-coil domain containing 127, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC127, Length 9,342 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC127-201ENST00000296824 DNAH7Q8WXX0 4024 aa6.45□□□□□ -1.38
CCDC127-201ENST00000296824 LORP23490 312 aaPredicted RBP6.41□□□□□ -1.38
CCDC127-201ENST00000296824 CSMD3Q7Z407 3707 aa6.35□□□□□ -1.39
CCDC127-201ENST00000296824 HECTD4Q9Y4D8 3996 aa6.31□□□□□ -1.4
CCDC127-201ENST00000296824 ANK2Q01484 3957 aa6.26□□□□□ -1.41
CCDC127-201ENST00000296824 MUC3AQ02505 3323 aa6.24□□□□□ -1.41
CCDC127-201ENST00000296824 SPRR2FQ96RM1 72 aa6.21□□□□□ -1.42
CCDC127-201ENST00000296824 ZNF469Q96JG9 3925 aaPredicted RBP6.2□□□□□ -1.42
CCDC127-201ENST00000296824 SVEP1Q4LDE5 3571 aa6.09□□□□□ -1.43
CCDC127-201ENST00000296824 DNAH1Q9P2D7 4330 aa6.08□□□□□ -1.44
CCDC127-201ENST00000296824 DNAH6Q9C0G6 4158 aa6.08□□□□□ -1.44
CCDC127-201ENST00000296824 LCE3CQ5T5A8 94 aa6.06□□□□□ -1.44
CCDC127-201ENST00000296824 CUBNO60494 3623 aa6.06□□□□□ -1.44
CCDC127-201ENST00000296824 KRTAP10-4P60372 401 aaPredicted RBP6.04□□□□□ -1.44
CCDC127-201ENST00000296824 CSMD2Q7Z408 3487 aa6.03□□□□□ -1.44
CCDC127-201ENST00000296824 SPRR2GQ9BYE4 73 aa6.02□□□□□ -1.45
CCDC127-201ENST00000296824 KRTAP4-5Q9BYR2 181 aa5.98□□□□□ -1.45
CCDC127-201ENST00000296824 KRTAP12-4P60329 112 aa5.98□□□□□ -1.45
CCDC127-201ENST00000296824 HUWE1Q7Z6Z7 4374 aaKnown RBP5.97□□□□□ -1.45
CCDC127-201ENST00000296824 KMT2AQ03164 3969 aa5.96□□□□□ -1.45
CCDC127-201ENST00000296824 KRTAP19-5Q3LI72 72 aa5.91□□□□□ -1.46
CCDC127-201ENST00000296824 SPRR2EP22531 72 aa5.88□□□□□ -1.47
CCDC127-201ENST00000296824 SPRR2BP35325 72 aa5.88□□□□□ -1.47
CCDC127-201ENST00000296824 SPRR2AP35326 72 aa5.88□□□□□ -1.47
CCDC127-201ENST00000296824 MT1HP80294 61 aa5.87□□□□□ -1.47
CCDC127-201ENST00000296824 DNAH2Q9P225 4427 aa5.82□□□□□ -1.48
CCDC127-201ENST00000296824 VPS13BQ7Z7G8 4022 aa5.8□□□□□ -1.48
CCDC127-201ENST00000296824 LCE2BO14633 110 aa5.78□□□□□ -1.48
CCDC127-201ENST00000296824 SPRR2DP22532 72 aa5.77□□□□□ -1.49
CCDC127-201ENST00000296824 MT2AP02795 61 aa5.74□□□□□ -1.49
CCDC127-201ENST00000296824 FLGP20930 4061 aaPredicted RBP5.73□□□□□ -1.49
CCDC127-201ENST00000296824 LCE3BQ5TA77 95 aa5.7□□□□□ -1.5
CCDC127-201ENST00000296824 MT3P25713 68 aa5.7□□□□□ -1.5
CCDC127-201ENST00000296824 ANK3Q12955 4377 aaKnown RBP5.68□□□□□ -1.5
CCDC127-201ENST00000296824 PRKDCP78527 4128 aaKnown RBP5.61□□□□□ -1.51
CCDC127-201ENST00000296824 FRAS1Q86XX4 4008 aa5.54□□□□□ -1.52
CCDC127-201ENST00000296824 MT1FP04733 61 aa5.51□□□□□ -1.53
CCDC127-201ENST00000296824 LCE3DQ9BYE3 92 aa5.51□□□□□ -1.53
CCDC127-201ENST00000296824 LCE2CQ5TA81 110 aa5.45□□□□□ -1.54
CCDC127-201ENST00000296824 MT1GP13640 62 aa5.43□□□□□ -1.54
CCDC127-201ENST00000296824 LCE3EQ5T5B0 92 aa5.41□□□□□ -1.54
CCDC127-201ENST00000296824 KRTAP4-1Q9BYQ7 146 aa5.39□□□□□ -1.55
CCDC127-201ENST00000296824 PKHD1P08F94 4074 aa5.35□□□□□ -1.55
CCDC127-201ENST00000296824 KRTAP19-8Q3LI54 63 aa5.34□□□□□ -1.56
CCDC127-201ENST00000296824 SPRR5A0A1B0GTR4 108 aa5.33□□□□□ -1.56
CCDC127-201ENST00000296824 LCE2DQ5TA82 110 aaPredicted RBP5.27□□□□□ -1.57
CCDC127-201ENST00000296824 FAT2Q9NYQ8 4349 aa5.21□□□□□ -1.57
CCDC127-201ENST00000296824 DNAH10Q8IVF4 4471 aa5.17□□□□□ -1.58
CCDC127-201ENST00000296824 MT1XP80297 61 aa5.14□□□□□ -1.59
CCDC127-201ENST00000296824 MT1LQ93083 61 aa5.09□□□□□ -1.59
CCDC127-201ENST00000296824 KRTAP19-3Q7Z4W3 81 aa5.09□□□□□ -1.59
CCDC127-201ENST00000296824 LRP1Q07954 4544 aaKnown RBP5.09□□□□□ -1.59
CCDC127-201ENST00000296824 DNAH9Q9NYC9 4486 aa5.08□□□□□ -1.6
CCDC127-201ENST00000296824 DNAH5Q8TE73 4624 aa5.07□□□□□ -1.6
CCDC127-201ENST00000296824 PLECQ15149 4684 aaKnown RBP5.04□□□□□ -1.6
CCDC127-201ENST00000296824 VPS13DQ5THJ4 4388 aa5.04□□□□□ -1.6
CCDC127-201ENST00000296824 KRTAP19-1Q8IUB9 90 aa5.03□□□□□ -1.6
CCDC127-201ENST00000296824 PKHD1L1Q86WI1 4243 aa5.01□□□□□ -1.61
CCDC127-201ENST00000296824 DNAH11Q96DT5 4516 aa5□□□□□ -1.61
CCDC127-201ENST00000296824 DYNC2H1Q8NCM8 4307 aaKnown RBP5□□□□□ -1.61
CCDC127-201ENST00000296824 DNAH17Q9UFH2 4485 aa4.99□□□□□ -1.61
CCDC127-201ENST00000296824 MT4P47944 62 aa4.96□□□□□ -1.62
CCDC127-201ENST00000296824 FAT1Q14517 4588 aa4.93□□□□□ -1.62
CCDC127-201ENST00000296824 DYNC1H1Q14204 4646 aaKnown RBP4.92□□□□□ -1.62
CCDC127-201ENST00000296824 LCE1DQ5T752 114 aa4.91□□□□□ -1.62
CCDC127-201ENST00000296824 PRM1P04553 51 aa4.9□□□□□ -1.62
CCDC127-201ENST00000296824 LCE1BQ5T7P3 118 aa4.88□□□□□ -1.63
CCDC127-201ENST00000296824 LRP1BQ9NZR2 4599 aa4.88□□□□□ -1.63
CCDC127-201ENST00000296824 DNHD1Q96M86 4753 aa4.88□□□□□ -1.63
CCDC127-201ENST00000296824 DNAH8Q96JB1 4490 aa4.86□□□□□ -1.63
CCDC127-201ENST00000296824 SACSQ9NZJ4 4579 aa4.83□□□□□ -1.64
CCDC127-201ENST00000296824 MT1BP07438 61 aa4.82□□□□□ -1.64
CCDC127-201ENST00000296824 MT1EP04732 61 aa4.8□□□□□ -1.64
CCDC127-201ENST00000296824 KRTAP9-8Q9BYQ0 159 aa4.79□□□□□ -1.64
CCDC127-201ENST00000296824 RYR1P21817 5038 aa4.76□□□□□ -1.65
CCDC127-201ENST00000296824 KRTAP9-3Q9BYQ3 159 aa4.75□□□□□ -1.65
CCDC127-201ENST00000296824 MT1MQ8N339 61 aa4.73□□□□□ -1.65
CCDC127-201ENST00000296824 KRTAP4-8A0A0G2JLE6 195 aa4.72□□□□□ -1.65
CCDC127-201ENST00000296824 KRTAP4-8Q9BYQ9 185 aa4.72□□□□□ -1.65
CCDC127-201ENST00000296824 STARD9Q9P2P6 4700 aa4.72□□□□□ -1.65
CCDC127-201ENST00000296824 HSPG2P98160 4391 aa4.71□□□□□ -1.66
CCDC127-201ENST00000296824 APOBP04114 4563 aaKnown RBP4.67□□□□□ -1.66
CCDC127-201ENST00000296824 LCE5AQ5TCM9 118 aa4.66□□□□□ -1.66
CCDC127-201ENST00000296824 KRTAP20-1Q3LI63 56 aa4.64□□□□□ -1.67
CCDC127-201ENST00000296824 PKD1P98161 4303 aa4.61□□□□□ -1.67
CCDC127-201ENST00000296824 MYCBP2O75592 4640 aa4.58□□□□□ -1.68
CCDC127-201ENST00000296824 TNXBP22105 4242 aa4.56□□□□□ -1.68
CCDC127-201ENST00000296824 KIAA1109Q2LD37 5005 aa4.55□□□□□ -1.68
CCDC127-201ENST00000296824 KRTAP19-6Q3LI70 58 aa4.53□□□□□ -1.68
CCDC127-201ENST00000296824 KRTAP9-2Q9BYQ4 174 aa4.53□□□□□ -1.68
CCDC127-201ENST00000296824 LCE1CQ5T751 118 aa4.49□□□□□ -1.69
CCDC127-201ENST00000296824 LCE1EQ5T753 118 aa4.49□□□□□ -1.69
CCDC127-201ENST00000296824 LCE1FQ5T754 118 aa4.49□□□□□ -1.69
CCDC127-201ENST00000296824 LCE1AQ5T7P2 110 aa4.49□□□□□ -1.69
CCDC127-201ENST00000296824 RYR3Q15413 4870 aa4.48□□□□□ -1.69
CCDC127-201ENST00000296824 MT1AP04731 61 aa4.47□□□□□ -1.69
CCDC127-201ENST00000296824 FAT3Q8TDW7 4589 aa4.46□□□□□ -1.7
CCDC127-201ENST00000296824 KRTAP2-3P0C7H8 128 aa4.41□□□□□ -1.7
CCDC127-201ENST00000296824 KRTAP2-4Q9BYR9 128 aa4.41□□□□□ -1.7
CCDC127-201ENST00000296824 KRTAP2-1Q9BYU5 128 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms