RNA–Protein interactions for RNA: ENST00000296210.11

TPRA1-201, Transcript of transmembrane protein adipocyte associated 1, humanhuman

TSL 1 (best) BASIC

Gene TPRA1, Length 1,725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPRA1-201ENST00000296210 A6NED7 52 aa14.03□□□□□ -0.16
TPRA1-201ENST00000296210 COX6B2Q6YFQ2 88 aa14.01□□□□□ -0.17
TPRA1-201ENST00000296210 A0A1B0GU69 56 aa13.97□□□□□ -0.17
TPRA1-201ENST00000296210 SPTSSBQ8NFR3 76 aa13.94□□□□□ -0.18
TPRA1-201ENST00000296210 A8MU10 97 aa13.93□□□□□ -0.18
TPRA1-201ENST00000296210 LCA10Q71F78 164 aa13.92□□□□□ -0.18
TPRA1-201ENST00000296210 CDC42SE1Q9NRR8 79 aa13.9□□□□□ -0.18
TPRA1-201ENST00000296210 MUC17Q685J3 4493 aa13.83□□□□□ -0.2
TPRA1-201ENST00000296210 SEC61GP60059 68 aa13.7□□□□□ -0.22
TPRA1-201ENST00000296210 KRTAP4-1Q9BYQ7 146 aa13.69□□□□□ -0.22
TPRA1-201ENST00000296210 UQCR11O14957 56 aa13.65□□□□□ -0.22
TPRA1-201ENST00000296210 UBR4Q5T4S7 5183 aa13.64□□□□□ -0.23
TPRA1-201ENST00000296210 SPATA8Q6RVD6 105 aa13.62□□□□□ -0.23
TPRA1-201ENST00000296210 RBM12B-AS1Q9P1G2 102 aa13.56□□□□□ -0.24
TPRA1-201ENST00000296210 MIR22HGQ0VDD5 57 aa13.56□□□□□ -0.24
TPRA1-201ENST00000296210 KRTAP3-3Q9BYR6 98 aa13.56□□□□□ -0.24
TPRA1-201ENST00000296210 S4R3F8 94 aa13.53□□□□□ -0.24
TPRA1-201ENST00000296210 PMAIP1Q13794 54 aa13.51□□□□□ -0.25
TPRA1-201ENST00000296210 H1FX-AS1Q4G0G2 97 aa13.49□□□□□ -0.25
TPRA1-201ENST00000296210 RNF213Q63HN8 5207 aa13.47□□□□□ -0.25
TPRA1-201ENST00000296210 A6NN06 94 aa13.44□□□□□ -0.26
TPRA1-201ENST00000296210 MUC2Q02817 5179 aa13.43□□□□□ -0.26
TPRA1-201ENST00000296210 A0A1B0GU33 70 aa13.38□□□□□ -0.27
TPRA1-201ENST00000296210 H0YAA0 97 aa13.32□□□□□ -0.28
TPRA1-201ENST00000296210 KRTAP10-6P60371 365 aaPredicted RBP13.25□□□□□ -0.29
TPRA1-201ENST00000296210 KRTAP3-2Q9BYR7 98 aa13.23□□□□□ -0.29
TPRA1-201ENST00000296210 KRTAP19-2Q3LHN2 52 aa13.19□□□□□ -0.3
TPRA1-201ENST00000296210 KTN1-AS1Q86SY8 53 aa13.16□□□□□ -0.3
TPRA1-201ENST00000296210 CSAG1Q6PB30 78 aa13.12□□□□□ -0.31
TPRA1-201ENST00000296210 LCE2CQ5TA81 110 aa13.1□□□□□ -0.31
TPRA1-201ENST00000296210 P0C880 135 aa13.04□□□□□ -0.32
TPRA1-201ENST00000296210 ADM2Q7Z4H4 148 aa13□□□□□ -0.33
TPRA1-201ENST00000296210 FAT4Q6V0I7 4981 aa12.99□□□□□ -0.33
TPRA1-201ENST00000296210 KRTAP13-4Q3LI77 160 aa12.99□□□□□ -0.33
TPRA1-201ENST00000296210 M0R2T5 61 aa12.92□□□□□ -0.34
TPRA1-201ENST00000296210 MT1HP80294 61 aa12.91□□□□□ -0.34
TPRA1-201ENST00000296210 FLGP20930 4061 aaPredicted RBP12.9□□□□□ -0.34
TPRA1-201ENST00000296210 K7ERS5 55 aa12.79□□□□□ -0.36
TPRA1-201ENST00000296210 A0A0D9SG42 100 aa12.74□□□□□ -0.37
TPRA1-201ENST00000296210 M0QZ58 72 aa12.71□□□□□ -0.38
TPRA1-201ENST00000296210 PRAC1Q96KF2 57 aa12.67□□□□□ -0.38
TPRA1-201ENST00000296210 LCE2AQ5TA79 106 aaPredicted RBP12.65□□□□□ -0.38
TPRA1-201ENST00000296210 KRTAP12-1P59990 96 aa12.51□□□□□ -0.41
TPRA1-201ENST00000296210 KRTAP12-2P59991 146 aa12.5□□□□□ -0.41
TPRA1-201ENST00000296210 R4GN34 69 aa12.46□□□□□ -0.41
TPRA1-201ENST00000296210 LORP23490 312 aaPredicted RBP12.42□□□□□ -0.42
TPRA1-201ENST00000296210 ROMO1P60602 79 aa12.42□□□□□ -0.42
TPRA1-201ENST00000296210 SPINT4Q6UDR6 99 aa12.39□□□□□ -0.43
TPRA1-201ENST00000296210 KRTAP9-8Q9BYQ0 159 aa12.35□□□□□ -0.43
TPRA1-201ENST00000296210 MT2AP02795 61 aa12.31□□□□□ -0.44
TPRA1-201ENST00000296210 KRTAP10-10P60014 251 aa12.29□□□□□ -0.44
TPRA1-201ENST00000296210 LINC01554Q52M75 96 aa12.28□□□□□ -0.44
TPRA1-201ENST00000296210 KRTAP25-1Q3LHN0 102 aa12.22□□□□□ -0.45
TPRA1-201ENST00000296210 MT1FP04733 61 aa12.21□□□□□ -0.45
TPRA1-201ENST00000296210 CRIPTQ9P021 101 aa12.14□□□□□ -0.47
TPRA1-201ENST00000296210 KRTAP9-3Q9BYQ3 159 aa11.93□□□□□ -0.5
TPRA1-201ENST00000296210 SPRR2GQ9BYE4 73 aa11.87□□□□□ -0.51
TPRA1-201ENST00000296210 KRTAP19-1Q8IUB9 90 aa11.83□□□□□ -0.52
TPRA1-201ENST00000296210 C10orf95Q9H7T3 257 aa11.83□□□□□ -0.52
TPRA1-201ENST00000296210 CAMK2N1Q7Z7J9 78 aa11.74□□□□□ -0.53
TPRA1-201ENST00000296210 LCE2DQ5TA82 110 aaPredicted RBP11.7□□□□□ -0.54
TPRA1-201ENST00000296210 LCE2BO14633 110 aa11.65□□□□□ -0.54
TPRA1-201ENST00000296210 KRTAP19-8Q3LI54 63 aa11.6□□□□□ -0.55
TPRA1-201ENST00000296210 PLAC4Q8WY50 150 aa11.53□□□□□ -0.56
TPRA1-201ENST00000296210 MT1BP07438 61 aa11.46□□□□□ -0.58
TPRA1-201ENST00000296210 KRTAP9-2Q9BYQ4 174 aa11.46□□□□□ -0.58
TPRA1-201ENST00000296210 USH2AO75445 5202 aa11.38□□□□□ -0.59
TPRA1-201ENST00000296210 TNP1P09430 55 aa11.28□□□□□ -0.6
TPRA1-201ENST00000296210 PP632Q6XCG6 107 aa11.27□□□□□ -0.61
TPRA1-201ENST00000296210 FSIP2Q5CZC0 6907 aa11.18□□□□□ -0.62
TPRA1-201ENST00000296210 KRTAP23-1A1A580 65 aa11.13□□□□□ -0.63
TPRA1-201ENST00000296210 PRO2289Q9P1D8 64 aa11.09□□□□□ -0.63
TPRA1-201ENST00000296210 SSPOA2VEC9 5147 aa11.07□□□□□ -0.64
TPRA1-201ENST00000296210 KRTAP19-6Q3LI70 58 aa11.06□□□□□ -0.64
TPRA1-201ENST00000296210 CRCT1Q9UGL9 99 aa11.02□□□□□ -0.65
TPRA1-201ENST00000296210 MT1XP80297 61 aa11.01□□□□□ -0.65
TPRA1-201ENST00000296210 KRTAP10-5P60370 271 aa11□□□□□ -0.65
TPRA1-201ENST00000296210 KRTAP15-1Q3LI76 137 aa10.98□□□□□ -0.65
TPRA1-201ENST00000296210 LCE3AQ5TA76 89 aa10.75□□□□□ -0.69
TPRA1-201ENST00000296210 KRTAP9-6A0A140TA67 174 aa10.74□□□□□ -0.69
TPRA1-201ENST00000296210 FCGBPQ9Y6R7 5405 aaPredicted RBP10.69□□□□□ -0.7
TPRA1-201ENST00000296210 KRTAP10-12P60413 245 aa10.58□□□□□ -0.72
TPRA1-201ENST00000296210 KRTAP10-7P60409 375 aaPredicted RBP10.57□□□□□ -0.72
TPRA1-201ENST00000296210 KRTAP8-1Q8IUC2 63 aa10.55□□□□□ -0.72
TPRA1-201ENST00000296210 NDUFAF8A1L188 74 aa10.36□□□□□ -0.75
TPRA1-201ENST00000296210 SPRR5A0A1B0GTR4 108 aa10.3□□□□□ -0.76
TPRA1-201ENST00000296210 KRTAP12-3P60328 96 aa10.28□□□□□ -0.76
TPRA1-201ENST00000296210 KRTAP4-8A0A0G2JLE6 195 aa10.23□□□□□ -0.77
TPRA1-201ENST00000296210 KRTAP4-8Q9BYQ9 185 aa10.23□□□□□ -0.77
TPRA1-201ENST00000296210 MACF1Q9UPN3 7388 aaKnown RBP10.22□□□□□ -0.77
TPRA1-201ENST00000296210 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.19□□□□□ -0.78
TPRA1-201ENST00000296210 KMT2DO14686 5537 aa10.15□□□□□ -0.78
TPRA1-201ENST00000296210 LUZP6Q538Z0 58 aa10.12□□□□□ -0.79
TPRA1-201ENST00000296210 KRTAP19-5Q3LI72 72 aa10.04□□□□□ -0.8
TPRA1-201ENST00000296210 H3BS24 57 aa10.02□□□□□ -0.8
TPRA1-201ENST00000296210 SYNE2Q8WXH0 6885 aaKnown RBP10□□□□□ -0.81
TPRA1-201ENST00000296210 KRTAP6-3Q3LI67 103 aa9.86□□□□□ -0.83
TPRA1-201ENST00000296210 SPRR2FQ96RM1 72 aa9.85□□□□□ -0.83
TPRA1-201ENST00000296210 KRTAP19-7Q3SYF9 63 aa9.81□□□□□ -0.84
TPRA1-201ENST00000296210 KRTAP5-9P26371 169 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms