RNA–Protein interactions for RNA: ENST00000291552.8

U2AF1-201, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene U2AF1, Length 962 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-201ENST00000291552 LOC101927531A0A1B0GV80 90 aa11.02□□□□□ -0.65
U2AF1-201ENST00000291552 CRIPTQ9P021 101 aa10.98□□□□□ -0.65
U2AF1-201ENST00000291552 KMT2DO14686 5537 aa10.98□□□□□ -0.65
U2AF1-201ENST00000291552 MDN1Q9NU22 5596 aa10.97□□□□□ -0.65
U2AF1-201ENST00000291552 LOC100996750A0A140TA64 210 aa10.96□□□□□ -0.65
U2AF1-201ENST00000291552 KRTAP4-6Q9BYQ5 205 aa10.96□□□□□ -0.65
U2AF1-201ENST00000291552 KRTAP5-9P26371 169 aa10.94□□□□□ -0.66
U2AF1-201ENST00000291552 IMUPQ9GZP8 106 aa10.89□□□□□ -0.67
U2AF1-201ENST00000291552 H0Y9P7 68 aa10.86□□□□□ -0.67
U2AF1-201ENST00000291552 PCP4L1A6NKN8 68 aa10.85□□□□□ -0.67
U2AF1-201ENST00000291552 H0YAA0 97 aa10.85□□□□□ -0.67
U2AF1-201ENST00000291552 UQCRQO14949 82 aa10.84□□□□□ -0.67
U2AF1-201ENST00000291552 ACYP1P07311 99 aa10.84□□□□□ -0.67
U2AF1-201ENST00000291552 ATP5EP2Q5VTU8 51 aa10.84□□□□□ -0.67
U2AF1-201ENST00000291552 NDUFC1O43677 76 aa10.82□□□□□ -0.68
U2AF1-201ENST00000291552 FAM240AA0A1B0GVK7 77 aa10.81□□□□□ -0.68
U2AF1-201ENST00000291552 HIST1H4AP62805 103 aaKnown RBP10.81□□□□□ -0.68
U2AF1-201ENST00000291552 ATOX1O00244 68 aa10.79□□□□□ -0.68
U2AF1-201ENST00000291552 KRTAP20-1Q3LI63 56 aa10.78□□□□□ -0.68
U2AF1-201ENST00000291552 ADM2Q7Z4H4 148 aa10.73□□□□□ -0.69
U2AF1-201ENST00000291552 A8MUN3 132 aa10.7□□□□□ -0.7
U2AF1-201ENST00000291552 MT1XP80297 61 aa10.65□□□□□ -0.7
U2AF1-201ENST00000291552 LINC00208Q96KT6 92 aa10.65□□□□□ -0.7
U2AF1-201ENST00000291552 LINC00643Q86TS7 51 aa10.59□□□□□ -0.71
U2AF1-201ENST00000291552 OCR1Q9BZK8 76 aa10.58□□□□□ -0.72
U2AF1-201ENST00000291552 PRO2289Q9P1D8 64 aa10.54□□□□□ -0.72
U2AF1-201ENST00000291552 SPRR2FQ96RM1 72 aa10.53□□□□□ -0.72
U2AF1-201ENST00000291552 P0C880 135 aa10.51□□□□□ -0.73
U2AF1-201ENST00000291552 MP68P56378 58 aa10.49□□□□□ -0.73
U2AF1-201ENST00000291552 PLAC4Q8WY50 150 aa10.47□□□□□ -0.73
U2AF1-201ENST00000291552 R4GN34 69 aa10.44□□□□□ -0.74
U2AF1-201ENST00000291552 KRTAP2-3P0C7H8 128 aa10.43□□□□□ -0.74
U2AF1-201ENST00000291552 SPRR2EP22531 72 aa10.43□□□□□ -0.74
U2AF1-201ENST00000291552 SPRR2BP35325 72 aa10.43□□□□□ -0.74
U2AF1-201ENST00000291552 SPRR2AP35326 72 aa10.43□□□□□ -0.74
U2AF1-201ENST00000291552 KRTAP2-4Q9BYR9 128 aa10.43□□□□□ -0.74
U2AF1-201ENST00000291552 KRTAP12-2P59991 146 aa10.4□□□□□ -0.74
U2AF1-201ENST00000291552 KRTAP8-1Q8IUC2 63 aa10.39□□□□□ -0.75
U2AF1-201ENST00000291552 DMAC1Q96GE9 116 aa10.38□□□□□ -0.75
U2AF1-201ENST00000291552 M0QZ58 72 aa10.37□□□□□ -0.75
U2AF1-201ENST00000291552 C20orf197Q8N268 126 aa10.35□□□□□ -0.75
U2AF1-201ENST00000291552 H3BPC8 53 aa10.32□□□□□ -0.76
U2AF1-201ENST00000291552 KRTAP4-8Q9BYQ9 185 aa10.32□□□□□ -0.76
U2AF1-201ENST00000291552 LCE1AQ5T7P2 110 aa10.3□□□□□ -0.76
U2AF1-201ENST00000291552 KRTAP4-8A0A0G2JLE6 195 aa10.27□□□□□ -0.77
U2AF1-201ENST00000291552 A0A1B0GV90 55 aa10.27□□□□□ -0.77
U2AF1-201ENST00000291552 LINC01554Q52M75 96 aa10.23□□□□□ -0.77
U2AF1-201ENST00000291552 KRTAP10-7P60409 375 aaPredicted RBP10.15□□□□□ -0.78
U2AF1-201ENST00000291552 KRTAP4-12Q9BQ66 201 aa10.15□□□□□ -0.78
U2AF1-201ENST00000291552 SCGB1A1P11684 91 aa10.13□□□□□ -0.79
U2AF1-201ENST00000291552 TRAV7A0A075B6U4 112 aa10.1□□□□□ -0.79
U2AF1-201ENST00000291552 KRTAP10-12P60413 245 aa10.09□□□□□ -0.79
U2AF1-201ENST00000291552 SPRR2DP22532 72 aa10.08□□□□□ -0.8
U2AF1-201ENST00000291552 KRTAP2-2Q9BYT5 123 aa10.08□□□□□ -0.8
U2AF1-201ENST00000291552 KRTAP2-1Q9BYU5 128 aa10.08□□□□□ -0.8
U2AF1-201ENST00000291552 J3QR89 54 aa10.05□□□□□ -0.8
U2AF1-201ENST00000291552 KRTAP19-4Q3LI73 84 aa10.05□□□□□ -0.8
U2AF1-201ENST00000291552 ACYP2P14621 99 aa9.99□□□□□ -0.81
U2AF1-201ENST00000291552 MT-ATP8P03928 68 aa9.93□□□□□ -0.82
U2AF1-201ENST00000291552 LCE3BQ5TA77 95 aa9.89□□□□□ -0.83
U2AF1-201ENST00000291552 SPTSSBQ8NFR3 76 aa9.89□□□□□ -0.83
U2AF1-201ENST00000291552 CHKB-CPT1BH3BT56 60 aa9.79□□□□□ -0.84
U2AF1-201ENST00000291552 SMIM20Q8N5G0 67 aa9.79□□□□□ -0.84
U2AF1-201ENST00000291552 KRTAP13-4Q3LI77 160 aa9.75□□□□□ -0.85
U2AF1-201ENST00000291552 SNURFQ9Y675 71 aa9.73□□□□□ -0.85
U2AF1-201ENST00000291552 LCE4AQ5TA78 99 aa9.68□□□□□ -0.86
U2AF1-201ENST00000291552 KRTAP9-9Q9BYP9 154 aa9.65□□□□□ -0.86
U2AF1-201ENST00000291552 KRTAP9-4Q9BYQ2 154 aa9.65□□□□□ -0.86
U2AF1-201ENST00000291552 SPANXA2-OT1Q8N9U9 137 aa9.61□□□□□ -0.87
U2AF1-201ENST00000291552 K7ERU9 68 aa9.57□□□□□ -0.88
U2AF1-201ENST00000291552 CAMK2N1Q7Z7J9 78 aa9.54□□□□□ -0.88
U2AF1-201ENST00000291552 KRTAP19-7Q3SYF9 63 aa9.53□□□□□ -0.88
U2AF1-201ENST00000291552 DSTQ03001 7570 aaKnown RBP9.47□□□□□ -0.89
U2AF1-201ENST00000291552 KRTAP23-1A1A580 65 aa9.47□□□□□ -0.89
U2AF1-201ENST00000291552 LCE5AQ5TCM9 118 aa9.47□□□□□ -0.89
U2AF1-201ENST00000291552 MT1EP04732 61 aa9.45□□□□□ -0.9
U2AF1-201ENST00000291552 GPR98Q8WXG9 6306 aa9.44□□□□□ -0.9
U2AF1-201ENST00000291552 SERP2Q8N6R1 65 aa9.42□□□□□ -0.9
U2AF1-201ENST00000291552 COA5Q86WW8 74 aa9.39□□□□□ -0.91
U2AF1-201ENST00000291552 KRTAP19-3Q7Z4W3 81 aa9.38□□□□□ -0.91
U2AF1-201ENST00000291552 A0A0D9SG42 100 aa9.34□□□□□ -0.91
U2AF1-201ENST00000291552 SPATA8Q6RVD6 105 aa9.28□□□□□ -0.92
U2AF1-201ENST00000291552 LCE1DQ5T752 114 aa9.26□□□□□ -0.93
U2AF1-201ENST00000291552 KRTAP4-9Q9BYQ8 210 aa9.24□□□□□ -0.93
U2AF1-201ENST00000291552 SERP1Q9Y6X1 66 aa9.21□□□□□ -0.94
U2AF1-201ENST00000291552 SEC61GP60059 68 aa9.2□□□□□ -0.94
U2AF1-201ENST00000291552 KRTAP19-5Q3LI72 72 aa9.2□□□□□ -0.94
U2AF1-201ENST00000291552 SPINT4Q6UDR6 99 aa9.19□□□□□ -0.94
U2AF1-201ENST00000291552 KRTAP12-1P59990 96 aa9.18□□□□□ -0.94
U2AF1-201ENST00000291552 A0A1B0GU33 70 aa9.15□□□□□ -0.94
U2AF1-201ENST00000291552 CYSTM1Q9H1C7 97 aa9.14□□□□□ -0.95
U2AF1-201ENST00000291552 MT1GP13640 62 aa9.1□□□□□ -0.95
U2AF1-201ENST00000291552 COX7CP15954 63 aa9.05□□□□□ -0.96
U2AF1-201ENST00000291552 H7BZZ5 65 aa9.03□□□□□ -0.96
U2AF1-201ENST00000291552 MT1MQ8N339 61 aa9.01□□□□□ -0.97
U2AF1-201ENST00000291552 HMCN1Q96RW7 5635 aa8.99□□□□□ -0.97
U2AF1-201ENST00000291552 MT1LQ93083 61 aa8.98□□□□□ -0.97
U2AF1-201ENST00000291552 KRTAP4-7Q9BYR0 210 aa8.98□□□□□ -0.97
U2AF1-201ENST00000291552 PP632Q6XCG6 107 aa8.97□□□□□ -0.97
U2AF1-201ENST00000291552 A8MU10 97 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms