RNA–Protein interactions for RNA: ENST00000278460.11

C11orf49-201, Transcript of chromosome 11 open reading frame 49, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C11orf49, Length 1,645 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf49-201ENST00000278460 PSPHP1O15172 72 aa9.74□□□□□ -0.85
C11orf49-201ENST00000278460 PRR15LQ9BU68 103 aa9.74□□□□□ -0.85
C11orf49-201ENST00000278460 S4R3F8 94 aa9.73□□□□□ -0.85
C11orf49-201ENST00000278460 LCA10Q71F78 164 aa9.71□□□□□ -0.86
C11orf49-201ENST00000278460 KRTAP3-3Q9BYR6 98 aa9.69□□□□□ -0.86
C11orf49-201ENST00000278460 Q5VV11 94 aa9.68□□□□□ -0.86
C11orf49-201ENST00000278460 A0A1B0GU69 56 aa9.64□□□□□ -0.87
C11orf49-201ENST00000278460 KRTAP19-2Q3LHN2 52 aa9.6□□□□□ -0.87
C11orf49-201ENST00000278460 SEC61GP60059 68 aa9.56□□□□□ -0.88
C11orf49-201ENST00000278460 CSAG1Q6PB30 78 aa9.51□□□□□ -0.89
C11orf49-201ENST00000278460 A6NED7 52 aa9.45□□□□□ -0.9
C11orf49-201ENST00000278460 BRK1Q8WUW1 75 aa9.41□□□□□ -0.9
C11orf49-201ENST00000278460 MUC2Q02817 5179 aa9.4□□□□□ -0.91
C11orf49-201ENST00000278460 FLGP20930 4061 aaPredicted RBP9.4□□□□□ -0.91
C11orf49-201ENST00000278460 UQCR11O14957 56 aa9.37□□□□□ -0.91
C11orf49-201ENST00000278460 KRTAP3-2Q9BYR7 98 aa9.37□□□□□ -0.91
C11orf49-201ENST00000278460 KRTAP10-6P60371 365 aaPredicted RBP9.35□□□□□ -0.91
C11orf49-201ENST00000278460 LCE2CQ5TA81 110 aa9.34□□□□□ -0.91
C11orf49-201ENST00000278460 RNF213Q63HN8 5207 aa9.33□□□□□ -0.92
C11orf49-201ENST00000278460 A0A1B0GU33 70 aa9.33□□□□□ -0.92
C11orf49-201ENST00000278460 H0YAA0 97 aa9.33□□□□□ -0.92
C11orf49-201ENST00000278460 CDC42SE1Q9NRR8 79 aa9.32□□□□□ -0.92
C11orf49-201ENST00000278460 ADM2Q7Z4H4 148 aa9.3□□□□□ -0.92
C11orf49-201ENST00000278460 UBR4Q5T4S7 5183 aa9.3□□□□□ -0.92
C11orf49-201ENST00000278460 SPATA8Q6RVD6 105 aa9.27□□□□□ -0.92
C11orf49-201ENST00000278460 MIR22HGQ0VDD5 57 aa9.27□□□□□ -0.93
C11orf49-201ENST00000278460 P0C880 135 aa9.26□□□□□ -0.93
C11orf49-201ENST00000278460 PRO0628Q9UI54 55 aa9.26□□□□□ -0.93
C11orf49-201ENST00000278460 A8MU10 97 aa9.24□□□□□ -0.93
C11orf49-201ENST00000278460 MT1HP80294 61 aa9.13□□□□□ -0.95
C11orf49-201ENST00000278460 KRTAP13-4Q3LI77 160 aa9.1□□□□□ -0.95
C11orf49-201ENST00000278460 FAT4Q6V0I7 4981 aa9.09□□□□□ -0.95
C11orf49-201ENST00000278460 M0QZ58 72 aa9.05□□□□□ -0.96
C11orf49-201ENST00000278460 M0R2T5 61 aa9.04□□□□□ -0.96
C11orf49-201ENST00000278460 LORP23490 312 aaPredicted RBP8.97□□□□□ -0.97
C11orf49-201ENST00000278460 R4GN34 69 aa8.96□□□□□ -0.98
C11orf49-201ENST00000278460 A0A0D9SG42 100 aa8.91□□□□□ -0.98
C11orf49-201ENST00000278460 PMAIP1Q13794 54 aa8.9□□□□□ -0.99
C11orf49-201ENST00000278460 CRIPTQ9P021 101 aa8.9□□□□□ -0.99
C11orf49-201ENST00000278460 A6NN06 94 aa8.86□□□□□ -0.99
C11orf49-201ENST00000278460 K7ERS5 55 aa8.84□□□□□ -0.99
C11orf49-201ENST00000278460 KRTAP9-8Q9BYQ0 159 aa8.82□□□□□ -1
C11orf49-201ENST00000278460 MT2AP02795 61 aa8.8□□□□□ -1
C11orf49-201ENST00000278460 KRTAP12-1P59990 96 aa8.78□□□□□ -1
C11orf49-201ENST00000278460 LINC01554Q52M75 96 aa8.78□□□□□ -1
C11orf49-201ENST00000278460 MT1FP04733 61 aa8.74□□□□□ -1.01
C11orf49-201ENST00000278460 KRTAP12-2P59991 146 aa8.74□□□□□ -1.01
C11orf49-201ENST00000278460 LCE2AQ5TA79 106 aaPredicted RBP8.72□□□□□ -1.01
C11orf49-201ENST00000278460 KRTAP10-10P60014 251 aa8.72□□□□□ -1.01
C11orf49-201ENST00000278460 SPINT4Q6UDR6 99 aa8.71□□□□□ -1.02
C11orf49-201ENST00000278460 SPRR2GQ9BYE4 73 aa8.69□□□□□ -1.02
C11orf49-201ENST00000278460 KRTAP19-1Q8IUB9 90 aa8.64□□□□□ -1.03
C11orf49-201ENST00000278460 SVIPQ8NHG7 77 aa8.64□□□□□ -1.03
C11orf49-201ENST00000278460 KTN1-AS1Q86SY8 53 aa8.57□□□□□ -1.04
C11orf49-201ENST00000278460 KRTAP9-3Q9BYQ3 159 aa8.5□□□□□ -1.05
C11orf49-201ENST00000278460 ROMO1P60602 79 aa8.49□□□□□ -1.05
C11orf49-201ENST00000278460 KRTAP19-8Q3LI54 63 aa8.46□□□□□ -1.06
C11orf49-201ENST00000278460 CAMK2N1Q7Z7J9 78 aa8.4□□□□□ -1.06
C11orf49-201ENST00000278460 PLAC4Q8WY50 150 aa8.4□□□□□ -1.06
C11orf49-201ENST00000278460 MT1BP07438 61 aa8.32□□□□□ -1.08
C11orf49-201ENST00000278460 PRAC1Q96KF2 57 aa8.31□□□□□ -1.08
C11orf49-201ENST00000278460 C10orf95Q9H7T3 257 aa8.29□□□□□ -1.08
C11orf49-201ENST00000278460 LCE2BO14633 110 aa8.24□□□□□ -1.09
C11orf49-201ENST00000278460 KRTAP25-1Q3LHN0 102 aa8.14□□□□□ -1.11
C11orf49-201ENST00000278460 MT1XP80297 61 aa8.06□□□□□ -1.12
C11orf49-201ENST00000278460 KRTAP10-5P60370 271 aa8.04□□□□□ -1.12
C11orf49-201ENST00000278460 TNP1P09430 55 aa8.03□□□□□ -1.12
C11orf49-201ENST00000278460 PRO2289Q9P1D8 64 aa7.96□□□□□ -1.13
C11orf49-201ENST00000278460 USH2AO75445 5202 aa7.92□□□□□ -1.14
C11orf49-201ENST00000278460 LCE2DQ5TA82 110 aaPredicted RBP7.91□□□□□ -1.14
C11orf49-201ENST00000278460 PP632Q6XCG6 107 aa7.85□□□□□ -1.15
C11orf49-201ENST00000278460 KRTAP23-1A1A580 65 aa7.85□□□□□ -1.15
C11orf49-201ENST00000278460 KRTAP19-6Q3LI70 58 aa7.74□□□□□ -1.17
C11orf49-201ENST00000278460 KRTAP10-7P60409 375 aaPredicted RBP7.73□□□□□ -1.17
C11orf49-201ENST00000278460 SSPOA2VEC9 5147 aa7.72□□□□□ -1.17
C11orf49-201ENST00000278460 KRTAP10-12P60413 245 aa7.67□□□□□ -1.18
C11orf49-201ENST00000278460 LCE3AQ5TA76 89 aa7.67□□□□□ -1.18
C11orf49-201ENST00000278460 KRTAP8-1Q8IUC2 63 aa7.53□□□□□ -1.2
C11orf49-201ENST00000278460 KRTAP9-2Q9BYQ4 174 aa7.51□□□□□ -1.21
C11orf49-201ENST00000278460 FSIP2Q5CZC0 6907 aa7.47□□□□□ -1.21
C11orf49-201ENST00000278460 KRTAP4-8A0A0G2JLE6 195 aa7.39□□□□□ -1.23
C11orf49-201ENST00000278460 KRTAP4-8Q9BYQ9 185 aa7.39□□□□□ -1.23
C11orf49-201ENST00000278460 KRTAP12-3P60328 96 aa7.36□□□□□ -1.23
C11orf49-201ENST00000278460 FCGBPQ9Y6R7 5405 aaPredicted RBP7.32□□□□□ -1.24
C11orf49-201ENST00000278460 KRTAP19-5Q3LI72 72 aa7.29□□□□□ -1.24
C11orf49-201ENST00000278460 KMT2DO14686 5537 aa7.28□□□□□ -1.24
C11orf49-201ENST00000278460 CRCT1Q9UGL9 99 aa7.27□□□□□ -1.25
C11orf49-201ENST00000278460 KRTAP15-1Q3LI76 137 aa7.24□□□□□ -1.25
C11orf49-201ENST00000278460 KRTAP19-7Q3SYF9 63 aa7.19□□□□□ -1.26
C11orf49-201ENST00000278460 MT1EP04732 61 aa7.05□□□□□ -1.28
C11orf49-201ENST00000278460 SPRR5A0A1B0GTR4 108 aa7□□□□□ -1.29
C11orf49-201ENST00000278460 MACF1Q9UPN3 7388 aaKnown RBP6.97□□□□□ -1.29
C11orf49-201ENST00000278460 KRTAP19-4Q3LI73 84 aa6.93□□□□□ -1.3
C11orf49-201ENST00000278460 MT1LQ93083 61 aa6.93□□□□□ -1.3
C11orf49-201ENST00000278460 KRTAP9-6A0A140TA67 174 aa6.89□□□□□ -1.31
C11orf49-201ENST00000278460 LCE3CQ5T5A8 94 aa6.89□□□□□ -1.31
C11orf49-201ENST00000278460 SPRR2FQ96RM1 72 aa6.85□□□□□ -1.31
C11orf49-201ENST00000278460 KRTAP5-9P26371 169 aa6.78□□□□□ -1.32
C11orf49-201ENST00000278460 KRTAP19-3Q7Z4W3 81 aa6.77□□□□□ -1.33
C11orf49-201ENST00000278460 LUZP6Q538Z0 58 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms