RNA–Protein interactions for RNA: ENST00000270361.15

CAPN10-201, Transcript of calpain 10, humanhuman

TSL 1 (best)

Gene CAPN10, Length 2,453 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN10-201ENST00000270361 FAT3Q8TDW7 4589 aa10.87□□□□□ -0.67
CAPN10-201ENST00000270361 S4R3F8 94 aa10.85□□□□□ -0.67
CAPN10-201ENST00000270361 XP32Q5T750 250 aa10.81□□□□□ -0.68
CAPN10-201ENST00000270361 CRIPTQ9P021 101 aa10.81□□□□□ -0.68
CAPN10-201ENST00000270361 H3BS24 57 aa10.8□□□□□ -0.68
CAPN10-201ENST00000270361 KRTAP3-2Q9BYR7 98 aa10.79□□□□□ -0.68
CAPN10-201ENST00000270361 KRTAP13-4Q3LI77 160 aa10.78□□□□□ -0.68
CAPN10-201ENST00000270361 DMBT1Q9UGM3 2413 aaPredicted RBP10.78□□□□□ -0.68
CAPN10-201ENST00000270361 TNXBP22105 4242 aa10.77□□□□□ -0.69
CAPN10-201ENST00000270361 Q5VSD8 79 aa10.74□□□□□ -0.69
CAPN10-201ENST00000270361 A0A0D9SG42 100 aa10.73□□□□□ -0.69
CAPN10-201ENST00000270361 RYR2Q92736 4967 aa10.72□□□□□ -0.69
CAPN10-201ENST00000270361 LRP1Q07954 4544 aaKnown RBP10.69□□□□□ -0.7
CAPN10-201ENST00000270361 HSPG2P98160 4391 aa10.67□□□□□ -0.7
CAPN10-201ENST00000270361 P0C880 135 aa10.63□□□□□ -0.71
CAPN10-201ENST00000270361 TPRXLQ17RH7 258 aa10.57□□□□□ -0.72
CAPN10-201ENST00000270361 KMT2CQ8NEZ4 4911 aaKnown RBP10.52□□□□□ -0.73
CAPN10-201ENST00000270361 MYCBP2O75592 4640 aa10.48□□□□□ -0.73
CAPN10-201ENST00000270361 KRTAP12-2P59991 146 aa10.47□□□□□ -0.73
CAPN10-201ENST00000270361 MT1HL1P0DM35 61 aa10.46□□□□□ -0.74
CAPN10-201ENST00000270361 SPINT4Q6UDR6 99 aa10.44□□□□□ -0.74
CAPN10-201ENST00000270361 M0QZ58 72 aa10.43□□□□□ -0.74
CAPN10-201ENST00000270361 C10orf95Q9H7T3 257 aa10.42□□□□□ -0.74
CAPN10-201ENST00000270361 KRTAP12-1P59990 96 aa10.41□□□□□ -0.74
CAPN10-201ENST00000270361 RYR1P21817 5038 aa10.36□□□□□ -0.75
CAPN10-201ENST00000270361 RYR3Q15413 4870 aa10.33□□□□□ -0.76
CAPN10-201ENST00000270361 KRTAP17-1Q9BYP8 105 aa10.31□□□□□ -0.76
CAPN10-201ENST00000270361 KRTAP15-1Q3LI76 137 aa10.23□□□□□ -0.77
CAPN10-201ENST00000270361 LPAP08519 4548 aa10.18□□□□□ -0.78
CAPN10-201ENST00000270361 LRP2P98164 4655 aa10.16□□□□□ -0.78
CAPN10-201ENST00000270361 KIAA1109Q2LD37 5005 aa10.12□□□□□ -0.79
CAPN10-201ENST00000270361 R4GN34 69 aa10.09□□□□□ -0.79
CAPN10-201ENST00000270361 NDUFAF8A1L188 74 aa10.02□□□□□ -0.8
CAPN10-201ENST00000270361 SEC61BP60468 96 aaKnown RBP10.02□□□□□ -0.8
CAPN10-201ENST00000270361 EPPK1P58107 5090 aaKnown RBP9.97□□□□□ -0.81
CAPN10-201ENST00000270361 ABCA13Q86UQ4 5058 aa9.8□□□□□ -0.84
CAPN10-201ENST00000270361 LORP23490 312 aaPredicted RBP9.78□□□□□ -0.84
CAPN10-201ENST00000270361 MUC17Q685J3 4493 aa9.77□□□□□ -0.85
CAPN10-201ENST00000270361 KRTAP4-5Q9BYR2 181 aa9.76□□□□□ -0.85
CAPN10-201ENST00000270361 KRTAP4-1Q9BYQ7 146 aa9.72□□□□□ -0.85
CAPN10-201ENST00000270361 PLAC4Q8WY50 150 aa9.69□□□□□ -0.86
CAPN10-201ENST00000270361 BIRC6Q9NR09 4857 aa9.64□□□□□ -0.87
CAPN10-201ENST00000270361 J3QL48 77 aa9.64□□□□□ -0.87
CAPN10-201ENST00000270361 KRTAP19-2Q3LHN2 52 aa9.63□□□□□ -0.87
CAPN10-201ENST00000270361 PP632Q6XCG6 107 aa9.63□□□□□ -0.87
CAPN10-201ENST00000270361 CAMK2N1Q7Z7J9 78 aa9.6□□□□□ -0.87
CAPN10-201ENST00000270361 HERC2O95714 4834 aa9.41□□□□□ -0.9
CAPN10-201ENST00000270361 LUZP6Q538Z0 58 aa9.34□□□□□ -0.91
CAPN10-201ENST00000270361 FLGP20930 4061 aaPredicted RBP9.32□□□□□ -0.92
CAPN10-201ENST00000270361 TNP1P09430 55 aa9.29□□□□□ -0.92
CAPN10-201ENST00000270361 KRTAP23-1A1A580 65 aa9.29□□□□□ -0.92
CAPN10-201ENST00000270361 PCLOQ9Y6V0 5065 aa9.27□□□□□ -0.93
CAPN10-201ENST00000270361 MUC2Q02817 5179 aa9.16□□□□□ -0.94
CAPN10-201ENST00000270361 HERC1Q15751 4861 aa9.12□□□□□ -0.95
CAPN10-201ENST00000270361 A0A0A0MQY5 61 aa9.03□□□□□ -0.96
CAPN10-201ENST00000270361 SPRR2GQ9BYE4 73 aa9.03□□□□□ -0.96
CAPN10-201ENST00000270361 SPRR5A0A1B0GTR4 108 aa9.01□□□□□ -0.97
CAPN10-201ENST00000270361 LCE2CQ5TA81 110 aa8.96□□□□□ -0.97
CAPN10-201ENST00000270361 KRTAP19-1Q8IUB9 90 aa8.9□□□□□ -0.99
CAPN10-201ENST00000270361 HMCN2Q8NDA2 5059 aa8.84□□□□□ -0.99
CAPN10-201ENST00000270361 M0R2T5 61 aa8.83□□□□□ -1
CAPN10-201ENST00000270361 MT1HP80294 61 aa8.73□□□□□ -1.01
CAPN10-201ENST00000270361 FAT4Q6V0I7 4981 aa8.72□□□□□ -1.01
CAPN10-201ENST00000270361 LCE3AQ5TA76 89 aa8.69□□□□□ -1.02
CAPN10-201ENST00000270361 KRTAP10-10P60014 251 aa8.68□□□□□ -1.02
CAPN10-201ENST00000270361 MT2AP02795 61 aa8.64□□□□□ -1.03
CAPN10-201ENST00000270361 MT1FP04733 61 aa8.63□□□□□ -1.03
CAPN10-201ENST00000270361 KRTAP19-8Q3LI54 63 aa8.58□□□□□ -1.04
CAPN10-201ENST00000270361 KRTAP9-8Q9BYQ0 159 aa8.56□□□□□ -1.04
CAPN10-201ENST00000270361 KRTAP8-1Q8IUC2 63 aa8.54□□□□□ -1.04
CAPN10-201ENST00000270361 UBR4Q5T4S7 5183 aa8.45□□□□□ -1.06
CAPN10-201ENST00000270361 RNF213Q63HN8 5207 aa8.45□□□□□ -1.06
CAPN10-201ENST00000270361 KRTAP10-5P60370 271 aa8.41□□□□□ -1.06
CAPN10-201ENST00000270361 MT1BP07438 61 aa8.41□□□□□ -1.06
CAPN10-201ENST00000270361 MT1XP80297 61 aa8.39□□□□□ -1.07
CAPN10-201ENST00000270361 KRTAP10-12P60413 245 aa8.34□□□□□ -1.08
CAPN10-201ENST00000270361 KRTAP12-3P60328 96 aa8.31□□□□□ -1.08
CAPN10-201ENST00000270361 KRTAP9-3Q9BYQ3 159 aa8.2□□□□□ -1.1
CAPN10-201ENST00000270361 PRO2289Q9P1D8 64 aa8.19□□□□□ -1.1
CAPN10-201ENST00000270361 INE1O15225 51 aa8.17□□□□□ -1.1
CAPN10-201ENST00000270361 KRTAP10-7P60409 375 aaPredicted RBP8.14□□□□□ -1.11
CAPN10-201ENST00000270361 KRTAP19-5Q3LI72 72 aa7.86□□□□□ -1.15
CAPN10-201ENST00000270361 LCE3CQ5T5A8 94 aa7.84□□□□□ -1.16
CAPN10-201ENST00000270361 LCE2BO14633 110 aa7.79□□□□□ -1.16
CAPN10-201ENST00000270361 KRTAP4-8A0A0G2JLE6 195 aa7.56□□□□□ -1.2
CAPN10-201ENST00000270361 KRTAP4-8Q9BYQ9 185 aa7.56□□□□□ -1.2
CAPN10-201ENST00000270361 KRTAP19-4Q3LI73 84 aa7.55□□□□□ -1.2
CAPN10-201ENST00000270361 LCE2AQ5TA79 106 aaPredicted RBP7.55□□□□□ -1.2
CAPN10-201ENST00000270361 KRTAP9-6A8MVA2 160 aa7.49□□□□□ -1.21
CAPN10-201ENST00000270361 USH2AO75445 5202 aa7.48□□□□□ -1.21
CAPN10-201ENST00000270361 KRTAP19-7Q3SYF9 63 aa7.47□□□□□ -1.21
CAPN10-201ENST00000270361 KMT2DO14686 5537 aa7.45□□□□□ -1.22
CAPN10-201ENST00000270361 KRTAP2-3P0C7H8 128 aa7.39□□□□□ -1.23
CAPN10-201ENST00000270361 KRTAP2-4Q9BYR9 128 aa7.39□□□□□ -1.23
CAPN10-201ENST00000270361 KRTAP2-1Q9BYU5 128 aa7.39□□□□□ -1.23
CAPN10-201ENST00000270361 MT1LQ93083 61 aa7.29□□□□□ -1.24
CAPN10-201ENST00000270361 KRTAP4-7Q9BYR0 210 aa7.28□□□□□ -1.24
CAPN10-201ENST00000270361 MT1EP04732 61 aa7.26□□□□□ -1.25
CAPN10-201ENST00000270361 FSIP2Q5CZC0 6907 aa7.17□□□□□ -1.26
CAPN10-201ENST00000270361 KRTAP9-2Q9BYQ4 174 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms