RNA–Protein interactions for RNA: ENST00000265806.10

R3HCC1-201, Transcript of R3H domain and coiled-coil containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene R3HCC1, Length 1,773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-201ENST00000265806 LCA10Q71F78 164 aa12.13□□□□□ -0.47
R3HCC1-201ENST00000265806 LINC01558Q9Y6Z2 57 aa12.13□□□□□ -0.47
R3HCC1-201ENST00000265806 KRTAP19-2Q3LHN2 52 aa12.12□□□□□ -0.47
R3HCC1-201ENST00000265806 KRTAP3-3Q9BYR6 98 aa12.11□□□□□ -0.47
R3HCC1-201ENST00000265806 MUC2Q02817 5179 aa12.01□□□□□ -0.49
R3HCC1-201ENST00000265806 PSPHP1O15172 72 aa11.99□□□□□ -0.49
R3HCC1-201ENST00000265806 PRR15LQ9BU68 103 aa11.98□□□□□ -0.49
R3HCC1-201ENST00000265806 UBR4Q5T4S7 5183 aa11.93□□□□□ -0.5
R3HCC1-201ENST00000265806 A0A1B0GU69 56 aa11.92□□□□□ -0.5
R3HCC1-201ENST00000265806 Q5VV11 94 aa11.91□□□□□ -0.5
R3HCC1-201ENST00000265806 CSAG1Q6PB30 78 aa11.9□□□□□ -0.51
R3HCC1-201ENST00000265806 RNF213Q63HN8 5207 aa11.86□□□□□ -0.51
R3HCC1-201ENST00000265806 SEC61GP60059 68 aa11.85□□□□□ -0.51
R3HCC1-201ENST00000265806 LCE2CQ5TA81 110 aa11.82□□□□□ -0.52
R3HCC1-201ENST00000265806 FLGP20930 4061 aaPredicted RBP11.81□□□□□ -0.52
R3HCC1-201ENST00000265806 KRTAP3-2Q9BYR7 98 aa11.68□□□□□ -0.54
R3HCC1-201ENST00000265806 H0YAA0 97 aa11.67□□□□□ -0.54
R3HCC1-201ENST00000265806 KRTAP10-6P60371 365 aaPredicted RBP11.67□□□□□ -0.54
R3HCC1-201ENST00000265806 A6NED7 52 aa11.63□□□□□ -0.55
R3HCC1-201ENST00000265806 ADM2Q7Z4H4 148 aa11.61□□□□□ -0.55
R3HCC1-201ENST00000265806 UQCR11O14957 56 aa11.58□□□□□ -0.56
R3HCC1-201ENST00000265806 MT1HP80294 61 aa11.57□□□□□ -0.56
R3HCC1-201ENST00000265806 A0A1B0GU33 70 aa11.56□□□□□ -0.56
R3HCC1-201ENST00000265806 P0C880 135 aa11.56□□□□□ -0.56
R3HCC1-201ENST00000265806 FAT4Q6V0I7 4981 aa11.54□□□□□ -0.56
R3HCC1-201ENST00000265806 BRK1Q8WUW1 75 aa11.49□□□□□ -0.57
R3HCC1-201ENST00000265806 CDC42SE1Q9NRR8 79 aa11.45□□□□□ -0.58
R3HCC1-201ENST00000265806 MIR22HGQ0VDD5 57 aa11.44□□□□□ -0.58
R3HCC1-201ENST00000265806 SPATA8Q6RVD6 105 aa11.44□□□□□ -0.58
R3HCC1-201ENST00000265806 M0R2T5 61 aa11.43□□□□□ -0.58
R3HCC1-201ENST00000265806 A8MU10 97 aa11.37□□□□□ -0.59
R3HCC1-201ENST00000265806 KRTAP13-4Q3LI77 160 aa11.33□□□□□ -0.6
R3HCC1-201ENST00000265806 M0QZ58 72 aa11.29□□□□□ -0.6
R3HCC1-201ENST00000265806 PRO0628Q9UI54 55 aa11.27□□□□□ -0.61
R3HCC1-201ENST00000265806 LORP23490 312 aaPredicted RBP11.24□□□□□ -0.61
R3HCC1-201ENST00000265806 R4GN34 69 aa11.21□□□□□ -0.61
R3HCC1-201ENST00000265806 KRTAP9-8Q9BYQ0 159 aa11.16□□□□□ -0.62
R3HCC1-201ENST00000265806 CRIPTQ9P021 101 aa11.16□□□□□ -0.62
R3HCC1-201ENST00000265806 SVIPQ8NHG7 77 aa11.14□□□□□ -0.63
R3HCC1-201ENST00000265806 LCE2AQ5TA79 106 aaPredicted RBP11.13□□□□□ -0.63
R3HCC1-201ENST00000265806 MT2AP02795 61 aa11.11□□□□□ -0.63
R3HCC1-201ENST00000265806 A0A0D9SG42 100 aa11.09□□□□□ -0.63
R3HCC1-201ENST00000265806 MT1FP04733 61 aa11.05□□□□□ -0.64
R3HCC1-201ENST00000265806 KRTAP10-10P60014 251 aa11.01□□□□□ -0.65
R3HCC1-201ENST00000265806 LINC01554Q52M75 96 aa10.97□□□□□ -0.65
R3HCC1-201ENST00000265806 SPRR2GQ9BYE4 73 aa10.93□□□□□ -0.66
R3HCC1-201ENST00000265806 K7ERS5 55 aa10.92□□□□□ -0.66
R3HCC1-201ENST00000265806 KRTAP12-1P59990 96 aa10.91□□□□□ -0.66
R3HCC1-201ENST00000265806 PMAIP1Q13794 54 aa10.88□□□□□ -0.67
R3HCC1-201ENST00000265806 KRTAP19-1Q8IUB9 90 aa10.88□□□□□ -0.67
R3HCC1-201ENST00000265806 KRTAP12-2P59991 146 aa10.87□□□□□ -0.67
R3HCC1-201ENST00000265806 A6NN06 94 aa10.85□□□□□ -0.67
R3HCC1-201ENST00000265806 SPINT4Q6UDR6 99 aa10.83□□□□□ -0.68
R3HCC1-201ENST00000265806 KRTAP9-3Q9BYQ3 159 aa10.75□□□□□ -0.69
R3HCC1-201ENST00000265806 KRTAP19-8Q3LI54 63 aa10.64□□□□□ -0.71
R3HCC1-201ENST00000265806 PLAC4Q8WY50 150 aa10.52□□□□□ -0.72
R3HCC1-201ENST00000265806 CAMK2N1Q7Z7J9 78 aa10.48□□□□□ -0.73
R3HCC1-201ENST00000265806 MT1BP07438 61 aa10.47□□□□□ -0.73
R3HCC1-201ENST00000265806 ROMO1P60602 79 aa10.47□□□□□ -0.73
R3HCC1-201ENST00000265806 LCE2BO14633 110 aa10.44□□□□□ -0.74
R3HCC1-201ENST00000265806 KTN1-AS1Q86SY8 53 aa10.44□□□□□ -0.74
R3HCC1-201ENST00000265806 C10orf95Q9H7T3 257 aa10.31□□□□□ -0.76
R3HCC1-201ENST00000265806 PRAC1Q96KF2 57 aa10.17□□□□□ -0.78
R3HCC1-201ENST00000265806 MT1XP80297 61 aa10.14□□□□□ -0.79
R3HCC1-201ENST00000265806 KRTAP10-5P60370 271 aa10.11□□□□□ -0.79
R3HCC1-201ENST00000265806 LCE2DQ5TA82 110 aaPredicted RBP10.11□□□□□ -0.79
R3HCC1-201ENST00000265806 USH2AO75445 5202 aa10.07□□□□□ -0.8
R3HCC1-201ENST00000265806 KRTAP25-1Q3LHN0 102 aa10.06□□□□□ -0.8
R3HCC1-201ENST00000265806 PRO2289Q9P1D8 64 aa10.03□□□□□ -0.8
R3HCC1-201ENST00000265806 TNP1P09430 55 aa10□□□□□ -0.81
R3HCC1-201ENST00000265806 KRTAP9-2Q9BYQ4 174 aa9.89□□□□□ -0.83
R3HCC1-201ENST00000265806 FSIP2Q5CZC0 6907 aa9.85□□□□□ -0.83
R3HCC1-201ENST00000265806 KRTAP19-6Q3LI70 58 aa9.82□□□□□ -0.84
R3HCC1-201ENST00000265806 SSPOA2VEC9 5147 aa9.78□□□□□ -0.84
R3HCC1-201ENST00000265806 KRTAP23-1A1A580 65 aa9.74□□□□□ -0.85
R3HCC1-201ENST00000265806 PP632Q6XCG6 107 aa9.73□□□□□ -0.85
R3HCC1-201ENST00000265806 KRTAP10-7P60409 375 aaPredicted RBP9.71□□□□□ -0.85
R3HCC1-201ENST00000265806 KRTAP10-12P60413 245 aa9.62□□□□□ -0.87
R3HCC1-201ENST00000265806 LCE3AQ5TA76 89 aa9.57□□□□□ -0.88
R3HCC1-201ENST00000265806 CRCT1Q9UGL9 99 aa9.46□□□□□ -0.9
R3HCC1-201ENST00000265806 KRTAP8-1Q8IUC2 63 aa9.4□□□□□ -0.9
R3HCC1-201ENST00000265806 FCGBPQ9Y6R7 5405 aaPredicted RBP9.36□□□□□ -0.91
R3HCC1-201ENST00000265806 KRTAP4-8A0A0G2JLE6 195 aa9.32□□□□□ -0.92
R3HCC1-201ENST00000265806 KRTAP4-8Q9BYQ9 185 aa9.32□□□□□ -0.92
R3HCC1-201ENST00000265806 KRTAP9-6A0A140TA67 174 aa9.28□□□□□ -0.92
R3HCC1-201ENST00000265806 KMT2DO14686 5537 aa9.21□□□□□ -0.94
R3HCC1-201ENST00000265806 KRTAP12-3P60328 96 aa9.19□□□□□ -0.94
R3HCC1-201ENST00000265806 KRTAP19-5Q3LI72 72 aa9.14□□□□□ -0.95
R3HCC1-201ENST00000265806 KRTAP19-7Q3SYF9 63 aa9.05□□□□□ -0.96
R3HCC1-201ENST00000265806 KRTAP15-1Q3LI76 137 aa9.02□□□□□ -0.97
R3HCC1-201ENST00000265806 MACF1Q9UPN3 7388 aaKnown RBP8.95□□□□□ -0.98
R3HCC1-201ENST00000265806 MT1EP04732 61 aa8.89□□□□□ -0.99
R3HCC1-201ENST00000265806 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.78□□□□□ -1
R3HCC1-201ENST00000265806 SYNE2Q8WXH0 6885 aaKnown RBP8.77□□□□□ -1.01
R3HCC1-201ENST00000265806 MT1LQ93083 61 aa8.71□□□□□ -1.02
R3HCC1-201ENST00000265806 SPRR2FQ96RM1 72 aa8.69□□□□□ -1.02
R3HCC1-201ENST00000265806 KRTAP19-4Q3LI73 84 aa8.67□□□□□ -1.02
R3HCC1-201ENST00000265806 KRTAP5-9P26371 169 aa8.64□□□□□ -1.03
R3HCC1-201ENST00000265806 SPRR5A0A1B0GTR4 108 aa8.63□□□□□ -1.03
R3HCC1-201ENST00000265806 LCE3CQ5T5A8 94 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms