RNA–Protein interactions for RNA: ENST00000265304.10

SSBP1-201, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-201ENST00000265304 SERP2Q8N6R1 65 aa7.01□□□□□ -1.29
SSBP1-201ENST00000265304 LCE1DQ5T752 114 aa7□□□□□ -1.29
SSBP1-201ENST00000265304 KLKP1Q107X0 134 aa6.99□□□□□ -1.29
SSBP1-201ENST00000265304 KRTAP10-6P60371 365 aaPredicted RBP6.96□□□□□ -1.3
SSBP1-201ENST00000265304 KRTAP4-7Q9BYR0 210 aa6.94□□□□□ -1.3
SSBP1-201ENST00000265304 A8MUN3 132 aa6.92□□□□□ -1.3
SSBP1-201ENST00000265304 M0R2T5 61 aa6.92□□□□□ -1.3
SSBP1-201ENST00000265304 COX7CP15954 63 aa6.89□□□□□ -1.31
SSBP1-201ENST00000265304 KRTAP9-8Q9BYQ0 159 aa6.88□□□□□ -1.31
SSBP1-201ENST00000265304 C20orf197Q8N268 126 aa6.86□□□□□ -1.31
SSBP1-201ENST00000265304 DMAC1Q96GE9 116 aa6.85□□□□□ -1.31
SSBP1-201ENST00000265304 SNURFQ9Y675 71 aa6.84□□□□□ -1.31
SSBP1-201ENST00000265304 SPANXA2-OT1Q8N9U9 137 aa6.82□□□□□ -1.32
SSBP1-201ENST00000265304 S4R3F8 94 aa6.82□□□□□ -1.32
SSBP1-201ENST00000265304 LCA10Q71F78 164 aa6.81□□□□□ -1.32
SSBP1-201ENST00000265304 ANAPC13Q9BS18 74 aa6.79□□□□□ -1.32
SSBP1-201ENST00000265304 KRTAP4-9Q9BYQ8 210 aa6.79□□□□□ -1.32
SSBP1-201ENST00000265304 MT2AP02795 61 aa6.78□□□□□ -1.32
SSBP1-201ENST00000265304 KRTAP19-4Q3LI73 84 aa6.78□□□□□ -1.32
SSBP1-201ENST00000265304 CSAG1Q6PB30 78 aa6.77□□□□□ -1.33
SSBP1-201ENST00000265304 NDUFC1O43677 76 aa6.76□□□□□ -1.33
SSBP1-201ENST00000265304 LCE4AQ5TA78 99 aa6.75□□□□□ -1.33
SSBP1-201ENST00000265304 H7BZZ5 65 aa6.72□□□□□ -1.33
SSBP1-201ENST00000265304 ACYP2P14621 99 aa6.72□□□□□ -1.33
SSBP1-201ENST00000265304 MT1FP04733 61 aa6.71□□□□□ -1.34
SSBP1-201ENST00000265304 CYSTM1Q9H1C7 97 aa6.71□□□□□ -1.34
SSBP1-201ENST00000265304 H0YAA0 97 aa6.66□□□□□ -1.34
SSBP1-201ENST00000265304 CCDC179H3BU77 68 aa6.66□□□□□ -1.34
SSBP1-201ENST00000265304 KRTAP9-3Q9BYQ3 159 aa6.65□□□□□ -1.34
SSBP1-201ENST00000265304 KRTAP10-10P60014 251 aa6.64□□□□□ -1.35
SSBP1-201ENST00000265304 KRTAP4-2Q9BYR5 136 aa6.63□□□□□ -1.35
SSBP1-201ENST00000265304 KRTAP9-7A8MTY7 169 aa6.6□□□□□ -1.35
SSBP1-201ENST00000265304 H3BS24 57 aa6.58□□□□□ -1.36
SSBP1-201ENST00000265304 SPTSSBQ8NFR3 76 aa6.54□□□□□ -1.36
SSBP1-201ENST00000265304 KRTAP4-11Q9BYQ6 195 aa6.54□□□□□ -1.36
SSBP1-201ENST00000265304 ATP5EP56381 51 aaPredicted RBP6.51□□□□□ -1.37
SSBP1-201ENST00000265304 COA5Q86WW8 74 aa6.51□□□□□ -1.37
SSBP1-201ENST00000265304 CRIPTQ9P021 101 aa6.51□□□□□ -1.37
SSBP1-201ENST00000265304 CHKB-CPT1BH3BT56 60 aa6.5□□□□□ -1.37
SSBP1-201ENST00000265304 SPRR2GQ9BYE4 73 aa6.49□□□□□ -1.37
SSBP1-201ENST00000265304 LCE5AQ5TCM9 118 aa6.48□□□□□ -1.37
SSBP1-201ENST00000265304 TMEM258P61165 79 aa6.47□□□□□ -1.37
SSBP1-201ENST00000265304 ADM2Q7Z4H4 148 aa6.46□□□□□ -1.38
SSBP1-201ENST00000265304 USH2AO75445 5202 aa6.42□□□□□ -1.38
SSBP1-201ENST00000265304 P0C880 135 aa6.41□□□□□ -1.38
SSBP1-201ENST00000265304 KRTAP19-8Q3LI54 63 aa6.39□□□□□ -1.39
SSBP1-201ENST00000265304 PCP4P48539 62 aa6.34□□□□□ -1.39
SSBP1-201ENST00000265304 CRCT1Q9UGL9 99 aa6.34□□□□□ -1.39
SSBP1-201ENST00000265304 FSIP2Q5CZC0 6907 aa6.33□□□□□ -1.4
SSBP1-201ENST00000265304 MT1BP07438 61 aa6.3□□□□□ -1.4
SSBP1-201ENST00000265304 SSPOA2VEC9 5147 aa6.29□□□□□ -1.4
SSBP1-201ENST00000265304 SERP1Q9Y6X1 66 aa6.27□□□□□ -1.41
SSBP1-201ENST00000265304 R4GN34 69 aa6.27□□□□□ -1.41
SSBP1-201ENST00000265304 M0QZ58 72 aa6.26□□□□□ -1.41
SSBP1-201ENST00000265304 KRTAP19-6Q3LI70 58 aa6.25□□□□□ -1.41
SSBP1-201ENST00000265304 Q5VV11 94 aa6.25□□□□□ -1.41
SSBP1-201ENST00000265304 SEC61GP60059 68 aa6.21□□□□□ -1.42
SSBP1-201ENST00000265304 LINC01558Q9Y6Z2 57 aa6.19□□□□□ -1.42
SSBP1-201ENST00000265304 KRTAP13-4Q3LI77 160 aa6.16□□□□□ -1.42
SSBP1-201ENST00000265304 A0A1B0GU69 56 aa6.15□□□□□ -1.42
SSBP1-201ENST00000265304 A6NN06 94 aa6.14□□□□□ -1.43
SSBP1-201ENST00000265304 RPS28P62857 69 aaKnown RBP6.14□□□□□ -1.43
SSBP1-201ENST00000265304 A0A1B0GU33 70 aa6.13□□□□□ -1.43
SSBP1-201ENST00000265304 FCGBPQ9Y6R7 5405 aaPredicted RBP6.12□□□□□ -1.43
SSBP1-201ENST00000265304 KRTAP10-5P60370 271 aa6.08□□□□□ -1.44
SSBP1-201ENST00000265304 PRR15LQ9BU68 103 aa6.08□□□□□ -1.44
SSBP1-201ENST00000265304 Q1T7F1 81 aa6.06□□□□□ -1.44
SSBP1-201ENST00000265304 PLAC4Q8WY50 150 aa6.06□□□□□ -1.44
SSBP1-201ENST00000265304 SMIM26A0A096LP01 95 aa6.05□□□□□ -1.44
SSBP1-201ENST00000265304 LINC01554Q52M75 96 aa6.05□□□□□ -1.44
SSBP1-201ENST00000265304 V9GYY9 64 aa6.04□□□□□ -1.44
SSBP1-201ENST00000265304 SPATA8Q6RVD6 105 aa6.01□□□□□ -1.45
SSBP1-201ENST00000265304 MT1XP80297 61 aa5.99□□□□□ -1.45
SSBP1-201ENST00000265304 PRO2289Q9P1D8 64 aa5.94□□□□□ -1.46
SSBP1-201ENST00000265304 UQCR11O14957 56 aa5.92□□□□□ -1.46
SSBP1-201ENST00000265304 KRTAP12-1P59990 96 aa5.91□□□□□ -1.46
SSBP1-201ENST00000265304 A0A0D9SG42 100 aa5.89□□□□□ -1.47
SSBP1-201ENST00000265304 A8MU10 97 aa5.86□□□□□ -1.47
SSBP1-201ENST00000265304 PSPHP1O15172 72 aa5.86□□□□□ -1.47
SSBP1-201ENST00000265304 KRTAP5-3Q6L8H2 238 aa5.86□□□□□ -1.47
SSBP1-201ENST00000265304 KRTAP12-2P59991 146 aa5.84□□□□□ -1.47
SSBP1-201ENST00000265304 MACF1Q9UPN3 7388 aaKnown RBP5.81□□□□□ -1.48
SSBP1-201ENST00000265304 MIR22HGQ0VDD5 57 aa5.79□□□□□ -1.48
SSBP1-201ENST00000265304 SPINT4Q6UDR6 99 aa5.79□□□□□ -1.48
SSBP1-201ENST00000265304 CAMK2N1Q7Z7J9 78 aa5.78□□□□□ -1.48
SSBP1-201ENST00000265304 KRTAP10-12P60413 245 aa5.73□□□□□ -1.49
SSBP1-201ENST00000265304 A6NED7 52 aa5.69□□□□□ -1.5
SSBP1-201ENST00000265304 KRTAP10-7P60409 375 aaPredicted RBP5.69□□□□□ -1.5
SSBP1-201ENST00000265304 KRTAP6-3Q3LI67 103 aa5.67□□□□□ -1.5
SSBP1-201ENST00000265304 SYNE2Q8WXH0 6885 aaKnown RBP5.64□□□□□ -1.51
SSBP1-201ENST00000265304 C10orf95Q9H7T3 257 aa5.62□□□□□ -1.51
SSBP1-201ENST00000265304 KRTAP5-9P26371 169 aa5.61□□□□□ -1.51
SSBP1-201ENST00000265304 CDC42SE1Q9NRR8 79 aa5.6□□□□□ -1.51
SSBP1-201ENST00000265304 KMT2DO14686 5537 aa5.59□□□□□ -1.51
SSBP1-201ENST00000265304 K7ERS5 55 aa5.58□□□□□ -1.52
SSBP1-201ENST00000265304 KRTAP8-1Q8IUC2 63 aa5.51□□□□□ -1.53
SSBP1-201ENST00000265304 TNP1P09430 55 aa5.49□□□□□ -1.53
SSBP1-201ENST00000265304 KRTAP25-1Q3LHN0 102 aa5.41□□□□□ -1.54
SSBP1-201ENST00000265304 SPRR2FQ96RM1 72 aa5.4□□□□□ -1.54
SSBP1-201ENST00000265304 MUC12Q9UKN1 5478 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms