RNA–Protein interactions for RNA: ENST00000265038.9

ERCC8-201, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC8, Length 2,017 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-201ENST00000265038 C1orf64Q8NEQ6 169 aa4□□□□□ -1.77
ERCC8-201ENST00000265038 UQCRQO14949 82 aa3.99□□□□□ -1.77
ERCC8-201ENST00000265038 J3QR89 54 aa3.99□□□□□ -1.77
ERCC8-201ENST00000265038 LOC101927531A0A1B0GV80 90 aa3.98□□□□□ -1.77
ERCC8-201ENST00000265038 H0Y9P7 68 aa3.96□□□□□ -1.78
ERCC8-201ENST00000265038 ATOX1O00244 68 aa3.95□□□□□ -1.78
ERCC8-201ENST00000265038 C5orf47Q569G3 176 aa3.95□□□□□ -1.78
ERCC8-201ENST00000265038 S4R3F8 94 aa3.95□□□□□ -1.78
ERCC8-201ENST00000265038 LCA10Q71F78 164 aa3.94□□□□□ -1.78
ERCC8-201ENST00000265038 OCR1Q9BZK8 76 aa3.94□□□□□ -1.78
ERCC8-201ENST00000265038 USH2AO75445 5202 aa3.93□□□□□ -1.78
ERCC8-201ENST00000265038 KRTAP19-4Q3LI73 84 aa3.91□□□□□ -1.78
ERCC8-201ENST00000265038 CSAG1Q6PB30 78 aa3.91□□□□□ -1.78
ERCC8-201ENST00000265038 LINC00208Q96KT6 92 aa3.91□□□□□ -1.78
ERCC8-201ENST00000265038 KLKP1Q107X0 134 aa3.9□□□□□ -1.79
ERCC8-201ENST00000265038 SSPOA2VEC9 5147 aa3.89□□□□□ -1.79
ERCC8-201ENST00000265038 MT-ATP8P03928 68 aa3.88□□□□□ -1.79
ERCC8-201ENST00000265038 MP68P56378 58 aa3.88□□□□□ -1.79
ERCC8-201ENST00000265038 K7ERU9 68 aa3.88□□□□□ -1.79
ERCC8-201ENST00000265038 SCGB1A1P11684 91 aa3.87□□□□□ -1.79
ERCC8-201ENST00000265038 IMUPQ9GZP8 106 aa3.87□□□□□ -1.79
ERCC8-201ENST00000265038 H3BPC8 53 aa3.85□□□□□ -1.79
ERCC8-201ENST00000265038 FAM236AA0A1B0GUQ0 79 aa3.84□□□□□ -1.79
ERCC8-201ENST00000265038 FAM236BA0A1B0GV22 79 aa3.84□□□□□ -1.79
ERCC8-201ENST00000265038 A8MUN3 132 aa3.84□□□□□ -1.79
ERCC8-201ENST00000265038 KRTAP19-6Q3LI70 58 aa3.82□□□□□ -1.8
ERCC8-201ENST00000265038 KRTAP4-11Q9BYQ6 195 aa3.82□□□□□ -1.8
ERCC8-201ENST00000265038 NDUFC1O43677 76 aa3.82□□□□□ -1.8
ERCC8-201ENST00000265038 SPRR2GQ9BYE4 73 aa3.8□□□□□ -1.8
ERCC8-201ENST00000265038 FCGBPQ9Y6R7 5405 aaPredicted RBP3.79□□□□□ -1.8
ERCC8-201ENST00000265038 TRAV7A0A075B6U4 112 aa3.78□□□□□ -1.8
ERCC8-201ENST00000265038 SMIM20Q8N5G0 67 aa3.78□□□□□ -1.8
ERCC8-201ENST00000265038 DMAC1Q96GE9 116 aa3.78□□□□□ -1.8
ERCC8-201ENST00000265038 H0YAA0 97 aa3.77□□□□□ -1.81
ERCC8-201ENST00000265038 MT1BP07438 61 aa3.77□□□□□ -1.81
ERCC8-201ENST00000265038 KRTAP19-8Q3LI54 63 aa3.77□□□□□ -1.81
ERCC8-201ENST00000265038 CRIPTQ9P021 101 aa3.75□□□□□ -1.81
ERCC8-201ENST00000265038 LCE4AQ5TA78 99 aa3.74□□□□□ -1.81
ERCC8-201ENST00000265038 Q5VV11 94 aa3.73□□□□□ -1.81
ERCC8-201ENST00000265038 ADM2Q7Z4H4 148 aa3.73□□□□□ -1.81
ERCC8-201ENST00000265038 KRTAP9-7A8MTY7 169 aa3.73□□□□□ -1.81
ERCC8-201ENST00000265038 SNURFQ9Y675 71 aa3.71□□□□□ -1.81
ERCC8-201ENST00000265038 SERP2Q8N6R1 65 aa3.7□□□□□ -1.82
ERCC8-201ENST00000265038 ACYP2P14621 99 aa3.69□□□□□ -1.82
ERCC8-201ENST00000265038 P0C880 135 aa3.68□□□□□ -1.82
ERCC8-201ENST00000265038 MACF1Q9UPN3 7388 aaKnown RBP3.67□□□□□ -1.82
ERCC8-201ENST00000265038 C20orf197Q8N268 126 aa3.67□□□□□ -1.82
ERCC8-201ENST00000265038 A6NN06 94 aa3.66□□□□□ -1.82
ERCC8-201ENST00000265038 KRTAP10-5P60370 271 aa3.65□□□□□ -1.83
ERCC8-201ENST00000265038 KRTAP15-1Q3LI76 137 aa3.64□□□□□ -1.83
ERCC8-201ENST00000265038 SPANXA2-OT1Q8N9U9 137 aa3.64□□□□□ -1.83
ERCC8-201ENST00000265038 SYNE2Q8WXH0 6885 aaKnown RBP3.63□□□□□ -1.83
ERCC8-201ENST00000265038 CHKB-CPT1BH3BT56 60 aa3.61□□□□□ -1.83
ERCC8-201ENST00000265038 R4GN34 69 aa3.61□□□□□ -1.83
ERCC8-201ENST00000265038 COX7CP15954 63 aa3.61□□□□□ -1.83
ERCC8-201ENST00000265038 SPTSSBQ8NFR3 76 aa3.61□□□□□ -1.83
ERCC8-201ENST00000265038 M0QZ58 72 aa3.6□□□□□ -1.83
ERCC8-201ENST00000265038 LCE5AQ5TCM9 118 aa3.6□□□□□ -1.83
ERCC8-201ENST00000265038 KRTAP6-3Q3LI67 103 aa3.57□□□□□ -1.84
ERCC8-201ENST00000265038 CYSTM1Q9H1C7 97 aa3.56□□□□□ -1.84
ERCC8-201ENST00000265038 PLAC4Q8WY50 150 aa3.56□□□□□ -1.84
ERCC8-201ENST00000265038 MT1XP80297 61 aa3.54□□□□□ -1.84
ERCC8-201ENST00000265038 H7BZZ5 65 aa3.54□□□□□ -1.84
ERCC8-201ENST00000265038 LINC01554Q52M75 96 aa3.54□□□□□ -1.84
ERCC8-201ENST00000265038 COA5Q86WW8 74 aa3.54□□□□□ -1.84
ERCC8-201ENST00000265038 ANAPC13Q9BS18 74 aa3.51□□□□□ -1.85
ERCC8-201ENST00000265038 PRO2289Q9P1D8 64 aa3.51□□□□□ -1.85
ERCC8-201ENST00000265038 KRTAP13-4Q3LI77 160 aa3.48□□□□□ -1.85
ERCC8-201ENST00000265038 CCDC179H3BU77 68 aa3.46□□□□□ -1.86
ERCC8-201ENST00000265038 KRTAP5-9P26371 169 aa3.44□□□□□ -1.86
ERCC8-201ENST00000265038 KRTAP12-2P59991 146 aa3.43□□□□□ -1.86
ERCC8-201ENST00000265038 NEBP20929 6669 aa3.42□□□□□ -1.86
ERCC8-201ENST00000265038 SEC61GP60059 68 aa3.42□□□□□ -1.86
ERCC8-201ENST00000265038 SERP1Q9Y6X1 66 aa3.42□□□□□ -1.86
ERCC8-201ENST00000265038 KRTAP10-7P60409 375 aaPredicted RBP3.39□□□□□ -1.87
ERCC8-201ENST00000265038 MUC12Q9UKN1 5478 aa3.38□□□□□ -1.87
ERCC8-201ENST00000265038 KMT2DO14686 5537 aa3.38□□□□□ -1.87
ERCC8-201ENST00000265038 A0A1B0GU33 70 aa3.37□□□□□ -1.87
ERCC8-201ENST00000265038 SPATA8Q6RVD6 105 aa3.37□□□□□ -1.87
ERCC8-201ENST00000265038 KRTAP10-12P60413 245 aa3.36□□□□□ -1.87
ERCC8-201ENST00000265038 KRTAP8-1Q8IUC2 63 aa3.36□□□□□ -1.87
ERCC8-201ENST00000265038 A0A0D9SG42 100 aa3.36□□□□□ -1.87
ERCC8-201ENST00000265038 ATP5EP56381 51 aaPredicted RBP3.35□□□□□ -1.87
ERCC8-201ENST00000265038 A0A1B0GU69 56 aa3.34□□□□□ -1.87
ERCC8-201ENST00000265038 SPRR2FQ96RM1 72 aa3.34□□□□□ -1.87
ERCC8-201ENST00000265038 CAMK2N1Q7Z7J9 78 aa3.33□□□□□ -1.88
ERCC8-201ENST00000265038 PRAC1Q96KF2 57 aa3.32□□□□□ -1.88
ERCC8-201ENST00000265038 KRTAP12-1P59990 96 aa3.31□□□□□ -1.88
ERCC8-201ENST00000265038 TMEM258P61165 79 aa3.31□□□□□ -1.88
ERCC8-201ENST00000265038 SPINT4Q6UDR6 99 aa3.3□□□□□ -1.88
ERCC8-201ENST00000265038 SPRR2EP22531 72 aa3.28□□□□□ -1.88
ERCC8-201ENST00000265038 SPRR2BP35325 72 aa3.28□□□□□ -1.88
ERCC8-201ENST00000265038 SPRR2AP35326 72 aa3.28□□□□□ -1.88
ERCC8-201ENST00000265038 LINC01558Q9Y6Z2 57 aa3.28□□□□□ -1.88
ERCC8-201ENST00000265038 MDN1Q9NU22 5596 aa3.28□□□□□ -1.88
ERCC8-201ENST00000265038 SMIM26A0A096LP01 95 aa3.27□□□□□ -1.89
ERCC8-201ENST00000265038 A8MU10 97 aa3.27□□□□□ -1.89
ERCC8-201ENST00000265038 LCE1AQ5T7P2 110 aa3.27□□□□□ -1.89
ERCC8-201ENST00000265038 PRR15LQ9BU68 103 aa3.26□□□□□ -1.89
ERCC8-201ENST00000265038 KRTAP20-1Q3LI63 56 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms