RNA–Protein interactions for RNA: ENST00000263309.7

CLNS1A-201, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3 BASIC

Gene CLNS1A, Length 1,172 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-201ENST00000263309 HRES1P13985 223 aa6.38□□□□□ -1.39
CLNS1A-201ENST00000263309 SNURFQ9Y675 71 aa6.36□□□□□ -1.39
CLNS1A-201ENST00000263309 LINC00208Q96KT6 92 aa6.35□□□□□ -1.39
CLNS1A-201ENST00000263309 C1orf64Q8NEQ6 169 aa6.34□□□□□ -1.39
CLNS1A-201ENST00000263309 H1FX-AS1Q4G0G2 97 aa6.32□□□□□ -1.4
CLNS1A-201ENST00000263309 MPLKIPQ8TAP9 179 aa6.32□□□□□ -1.4
CLNS1A-201ENST00000263309 H7BZZ5 65 aa6.31□□□□□ -1.4
CLNS1A-201ENST00000263309 TMEM258P61165 79 aa6.31□□□□□ -1.4
CLNS1A-201ENST00000263309 MT1HP80294 61 aa6.31□□□□□ -1.4
CLNS1A-201ENST00000263309 CYSTM1Q9H1C7 97 aa6.31□□□□□ -1.4
CLNS1A-201ENST00000263309 C4orf26Q17RF5 130 aa6.29□□□□□ -1.4
CLNS1A-201ENST00000263309 KRTAP19-2Q3LHN2 52 aa6.29□□□□□ -1.4
CLNS1A-201ENST00000263309 CYP4F30PQ9H0H9 118 aa6.29□□□□□ -1.4
CLNS1A-201ENST00000263309 ATP5EP56381 51 aaPredicted RBP6.25□□□□□ -1.41
CLNS1A-201ENST00000263309 SPANXA2-OT1Q8N9U9 137 aa6.24□□□□□ -1.41
CLNS1A-201ENST00000263309 A8MUN3 132 aa6.19□□□□□ -1.42
CLNS1A-201ENST00000263309 KRTAP4-7Q9BYR0 210 aa6.18□□□□□ -1.42
CLNS1A-201ENST00000263309 S4R3F8 94 aa6.18□□□□□ -1.42
CLNS1A-201ENST00000263309 KRTAP10-6P60371 365 aaPredicted RBP6.17□□□□□ -1.42
CLNS1A-201ENST00000263309 LCE1DQ5T752 114 aa6.16□□□□□ -1.42
CLNS1A-201ENST00000263309 CSAG1Q6PB30 78 aa6.16□□□□□ -1.42
CLNS1A-201ENST00000263309 RPS28P62857 69 aaKnown RBP6.13□□□□□ -1.43
CLNS1A-201ENST00000263309 SERP1Q9Y6X1 66 aa6.11□□□□□ -1.43
CLNS1A-201ENST00000263309 DMAC1Q96GE9 116 aa6.07□□□□□ -1.44
CLNS1A-201ENST00000263309 KRTAP10-10P60014 251 aa6.06□□□□□ -1.44
CLNS1A-201ENST00000263309 ACYP2P14621 99 aa6.05□□□□□ -1.44
CLNS1A-201ENST00000263309 SPTSSBQ8NFR3 76 aa6.04□□□□□ -1.44
CLNS1A-201ENST00000263309 LCA10Q71F78 164 aa6.03□□□□□ -1.44
CLNS1A-201ENST00000263309 KRTAP3-1Q9BYR8 98 aa6.03□□□□□ -1.44
CLNS1A-201ENST00000263309 KRTAP4-9Q9BYQ8 210 aa6.01□□□□□ -1.45
CLNS1A-201ENST00000263309 KRTAP9-7A8MTY7 169 aa6□□□□□ -1.45
CLNS1A-201ENST00000263309 CHKB-CPT1BH3BT56 60 aa6□□□□□ -1.45
CLNS1A-201ENST00000263309 FLGP20930 4061 aaPredicted RBP5.99□□□□□ -1.45
CLNS1A-201ENST00000263309 SSPOA2VEC9 5147 aa5.99□□□□□ -1.45
CLNS1A-201ENST00000263309 COA5Q86WW8 74 aa5.99□□□□□ -1.45
CLNS1A-201ENST00000263309 USH2AO75445 5202 aa5.99□□□□□ -1.45
CLNS1A-201ENST00000263309 KRTAP9-8Q9BYQ0 159 aa5.97□□□□□ -1.45
CLNS1A-201ENST00000263309 SMIM26A0A096LP01 95 aa5.96□□□□□ -1.46
CLNS1A-201ENST00000263309 KRTAP4-2Q9BYR5 136 aa5.95□□□□□ -1.46
CLNS1A-201ENST00000263309 MT2AP02795 61 aa5.94□□□□□ -1.46
CLNS1A-201ENST00000263309 CRIPTQ9P021 101 aa5.89□□□□□ -1.47
CLNS1A-201ENST00000263309 H0YAA0 97 aa5.87□□□□□ -1.47
CLNS1A-201ENST00000263309 MT1FP04733 61 aa5.86□□□□□ -1.47
CLNS1A-201ENST00000263309 V9GYY9 64 aa5.86□□□□□ -1.47
CLNS1A-201ENST00000263309 FCGBPQ9Y6R7 5405 aaPredicted RBP5.86□□□□□ -1.47
CLNS1A-201ENST00000263309 LCE4AQ5TA78 99 aa5.85□□□□□ -1.47
CLNS1A-201ENST00000263309 Q1T7F1 81 aa5.84□□□□□ -1.47
CLNS1A-201ENST00000263309 ADM2Q7Z4H4 148 aa5.81□□□□□ -1.48
CLNS1A-201ENST00000263309 SEC61GP60059 68 aa5.8□□□□□ -1.48
CLNS1A-201ENST00000263309 SYNE2Q8WXH0 6885 aaKnown RBP5.8□□□□□ -1.48
CLNS1A-201ENST00000263309 KRTAP9-3Q9BYQ3 159 aa5.79□□□□□ -1.48
CLNS1A-201ENST00000263309 LINC01558Q9Y6Z2 57 aa5.79□□□□□ -1.48
CLNS1A-201ENST00000263309 KRTAP4-11Q9BYQ6 195 aa5.78□□□□□ -1.48
CLNS1A-201ENST00000263309 MACF1Q9UPN3 7388 aaKnown RBP5.77□□□□□ -1.49
CLNS1A-201ENST00000263309 R4GN34 69 aa5.74□□□□□ -1.49
CLNS1A-201ENST00000263309 PRR15LQ9BU68 103 aa5.71□□□□□ -1.5
CLNS1A-201ENST00000263309 Q5VV11 94 aa5.7□□□□□ -1.5
CLNS1A-201ENST00000263309 A0A1B0GU69 56 aa5.68□□□□□ -1.5
CLNS1A-201ENST00000263309 PSPHP1O15172 72 aa5.66□□□□□ -1.5
CLNS1A-201ENST00000263309 SPRR2GQ9BYE4 73 aa5.66□□□□□ -1.5
CLNS1A-201ENST00000263309 M0QZ58 72 aa5.65□□□□□ -1.5
CLNS1A-201ENST00000263309 PLAC4Q8WY50 150 aa5.63□□□□□ -1.51
CLNS1A-201ENST00000263309 P0C880 135 aa5.59□□□□□ -1.51
CLNS1A-201ENST00000263309 LINC01554Q52M75 96 aa5.57□□□□□ -1.52
CLNS1A-201ENST00000263309 LCE5AQ5TCM9 118 aa5.56□□□□□ -1.52
CLNS1A-201ENST00000263309 KRTAP19-8Q3LI54 63 aa5.54□□□□□ -1.52
CLNS1A-201ENST00000263309 UQCR11O14957 56 aa5.53□□□□□ -1.52
CLNS1A-201ENST00000263309 A0A1B0GU33 70 aa5.52□□□□□ -1.53
CLNS1A-201ENST00000263309 A6NED7 52 aa5.52□□□□□ -1.53
CLNS1A-201ENST00000263309 KRTAP19-6Q3LI70 58 aa5.52□□□□□ -1.53
CLNS1A-201ENST00000263309 PRO2289Q9P1D8 64 aa5.52□□□□□ -1.53
CLNS1A-201ENST00000263309 A6NN06 94 aa5.5□□□□□ -1.53
CLNS1A-201ENST00000263309 KRTAP6-3Q3LI67 103 aa5.48□□□□□ -1.53
CLNS1A-201ENST00000263309 NEBP20929 6669 aa5.47□□□□□ -1.53
CLNS1A-201ENST00000263309 SPATA8Q6RVD6 105 aa5.46□□□□□ -1.54
CLNS1A-201ENST00000263309 CDC42SE1Q9NRR8 79 aa5.45□□□□□ -1.54
CLNS1A-201ENST00000263309 MIR22HGQ0VDD5 57 aa5.44□□□□□ -1.54
CLNS1A-201ENST00000263309 KRTAP19-4Q3LI73 84 aa5.44□□□□□ -1.54
CLNS1A-201ENST00000263309 BRK1Q8WUW1 75 aa5.44□□□□□ -1.54
CLNS1A-201ENST00000263309 MT1BP07438 61 aa5.43□□□□□ -1.54
CLNS1A-201ENST00000263309 KRTAP5-3Q6L8H2 238 aa5.4□□□□□ -1.54
CLNS1A-201ENST00000263309 CAMK2N1Q7Z7J9 78 aa5.37□□□□□ -1.55
CLNS1A-201ENST00000263309 PRO0628Q9UI54 55 aa5.37□□□□□ -1.55
CLNS1A-201ENST00000263309 H3BS24 57 aa5.36□□□□□ -1.55
CLNS1A-201ENST00000263309 SVIPQ8NHG7 77 aa5.36□□□□□ -1.55
CLNS1A-201ENST00000263309 KRTAP10-5P60370 271 aa5.35□□□□□ -1.55
CLNS1A-201ENST00000263309 MUC12Q9UKN1 5478 aa5.35□□□□□ -1.55
CLNS1A-201ENST00000263309 KRTAP13-4Q3LI77 160 aa5.34□□□□□ -1.55
CLNS1A-201ENST00000263309 A0A0D9SG42 100 aa5.33□□□□□ -1.56
CLNS1A-201ENST00000263309 A8MU10 97 aa5.31□□□□□ -1.56
CLNS1A-201ENST00000263309 SPINT4Q6UDR6 99 aa5.31□□□□□ -1.56
CLNS1A-201ENST00000263309 K7ERS5 55 aa5.25□□□□□ -1.57
CLNS1A-201ENST00000263309 KRTAP20-1Q3LI63 56 aa5.21□□□□□ -1.58
CLNS1A-201ENST00000263309 MDN1Q9NU22 5596 aa5.18□□□□□ -1.58
CLNS1A-201ENST00000263309 MT1XP80297 61 aa5.18□□□□□ -1.58
CLNS1A-201ENST00000263309 KMT2DO14686 5537 aa5.17□□□□□ -1.58
CLNS1A-201ENST00000263309 KRTAP12-1P59990 96 aa5.17□□□□□ -1.58
CLNS1A-201ENST00000263309 PMAIP1Q13794 54 aa5.17□□□□□ -1.58
CLNS1A-201ENST00000263309 KRTAP12-2P59991 146 aa5.13□□□□□ -1.59
CLNS1A-201ENST00000263309 KRTAP5-9P26371 169 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms