RNA–Protein interactions for RNA: ENST00000260956.8

SSB-201, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-201ENST00000260956 MUC2Q02817 5179 aa9.31□□□□□ -0.92
SSB-201ENST00000260956 SPINK7P58062 85 aa9.31□□□□□ -0.92
SSB-201ENST00000260956 LCA10Q71F78 164 aa9.28□□□□□ -0.92
SSB-201ENST00000260956 RPL37P61927 97 aaKnown RBP9.26□□□□□ -0.93
SSB-201ENST00000260956 TPRXLQ17RH7 258 aa9.25□□□□□ -0.93
SSB-201ENST00000260956 XP32Q5T750 250 aa9.25□□□□□ -0.93
SSB-201ENST00000260956 A6NED7 52 aa9.22□□□□□ -0.93
SSB-201ENST00000260956 CDC42SE1Q9NRR8 79 aa9.19□□□□□ -0.94
SSB-201ENST00000260956 COX6B2Q6YFQ2 88 aa9.17□□□□□ -0.94
SSB-201ENST00000260956 A0A1B0GU69 56 aa9.15□□□□□ -0.94
SSB-201ENST00000260956 LCE2BO14633 110 aa9.14□□□□□ -0.95
SSB-201ENST00000260956 ATP11AUNQ6ZP68 121 aa9.14□□□□□ -0.95
SSB-201ENST00000260956 MUC17Q685J3 4493 aa9.09□□□□□ -0.95
SSB-201ENST00000260956 SPTSSBQ8NFR3 76 aa9.05□□□□□ -0.96
SSB-201ENST00000260956 SPATA8Q6RVD6 105 aa9.02□□□□□ -0.96
SSB-201ENST00000260956 A6NN06 94 aa8.98□□□□□ -0.97
SSB-201ENST00000260956 KRTAP4-1Q9BYQ7 146 aa8.98□□□□□ -0.97
SSB-201ENST00000260956 UQCR11O14957 56 aa8.95□□□□□ -0.98
SSB-201ENST00000260956 PMAIP1Q13794 54 aa8.93□□□□□ -0.98
SSB-201ENST00000260956 FAT4Q6V0I7 4981 aa8.91□□□□□ -0.98
SSB-201ENST00000260956 MIR22HGQ0VDD5 57 aa8.91□□□□□ -0.98
SSB-201ENST00000260956 SEC61BP60468 96 aaKnown RBP8.9□□□□□ -0.98
SSB-201ENST00000260956 SEC61GP60059 68 aa8.87□□□□□ -0.99
SSB-201ENST00000260956 H0YAA0 97 aa8.83□□□□□ -1
SSB-201ENST00000260956 H1FX-AS1Q4G0G2 97 aa8.81□□□□□ -1
SSB-201ENST00000260956 S4R3F8 94 aa8.8□□□□□ -1
SSB-201ENST00000260956 KRTAP10-6P60371 365 aaPredicted RBP8.77□□□□□ -1
SSB-201ENST00000260956 A0A1B0GU33 70 aa8.77□□□□□ -1.01
SSB-201ENST00000260956 KTN1-AS1Q86SY8 53 aa8.76□□□□□ -1.01
SSB-201ENST00000260956 KRTAP19-2Q3LHN2 52 aa8.71□□□□□ -1.01
SSB-201ENST00000260956 LCE2CQ5TA81 110 aa8.68□□□□□ -1.02
SSB-201ENST00000260956 LCE2AQ5TA79 106 aaPredicted RBP8.67□□□□□ -1.02
SSB-201ENST00000260956 RBM12B-AS1Q9P1G2 102 aa8.64□□□□□ -1.03
SSB-201ENST00000260956 KRTAP13-4Q3LI77 160 aa8.61□□□□□ -1.03
SSB-201ENST00000260956 P0C880 135 aa8.58□□□□□ -1.04
SSB-201ENST00000260956 CSAG1Q6PB30 78 aa8.51□□□□□ -1.05
SSB-201ENST00000260956 FLGP20930 4061 aaPredicted RBP8.5□□□□□ -1.05
SSB-201ENST00000260956 MT1HP80294 61 aa8.49□□□□□ -1.05
SSB-201ENST00000260956 ADM2Q7Z4H4 148 aa8.49□□□□□ -1.05
SSB-201ENST00000260956 PRAC1Q96KF2 57 aa8.44□□□□□ -1.06
SSB-201ENST00000260956 LORP23490 312 aaPredicted RBP8.41□□□□□ -1.06
SSB-201ENST00000260956 A0A0D9SG42 100 aa8.32□□□□□ -1.08
SSB-201ENST00000260956 M0QZ58 72 aa8.3□□□□□ -1.08
SSB-201ENST00000260956 K7ERS5 55 aa8.29□□□□□ -1.08
SSB-201ENST00000260956 M0R2T5 61 aa8.26□□□□□ -1.09
SSB-201ENST00000260956 KRTAP12-1P59990 96 aa8.26□□□□□ -1.09
SSB-201ENST00000260956 KRTAP12-2P59991 146 aa8.26□□□□□ -1.09
SSB-201ENST00000260956 ROMO1P60602 79 aa8.17□□□□□ -1.1
SSB-201ENST00000260956 KRTAP9-2Q9BYQ4 174 aa8.17□□□□□ -1.1
SSB-201ENST00000260956 KRTAP9-8Q9BYQ0 159 aa8.12□□□□□ -1.11
SSB-201ENST00000260956 KRTAP25-1Q3LHN0 102 aa8.11□□□□□ -1.11
SSB-201ENST00000260956 R4GN34 69 aa8.08□□□□□ -1.12
SSB-201ENST00000260956 FSIP2Q5CZC0 6907 aa8.08□□□□□ -1.12
SSB-201ENST00000260956 SPINT4Q6UDR6 99 aa8.05□□□□□ -1.12
SSB-201ENST00000260956 LINC01554Q52M75 96 aa8.02□□□□□ -1.13
SSB-201ENST00000260956 MT2AP02795 61 aa8□□□□□ -1.13
SSB-201ENST00000260956 CRIPTQ9P021 101 aa7.97□□□□□ -1.13
SSB-201ENST00000260956 MT1FP04733 61 aa7.96□□□□□ -1.14
SSB-201ENST00000260956 KRTAP10-10P60014 251 aa7.86□□□□□ -1.15
SSB-201ENST00000260956 USH2AO75445 5202 aa7.86□□□□□ -1.15
SSB-201ENST00000260956 KRTAP9-3Q9BYQ3 159 aa7.84□□□□□ -1.15
SSB-201ENST00000260956 C10orf95Q9H7T3 257 aa7.83□□□□□ -1.16
SSB-201ENST00000260956 KRTAP9-6A0A140TA67 174 aa7.75□□□□□ -1.17
SSB-201ENST00000260956 CRCT1Q9UGL9 99 aa7.74□□□□□ -1.17
SSB-201ENST00000260956 SSPOA2VEC9 5147 aa7.73□□□□□ -1.17
SSB-201ENST00000260956 SPRR2GQ9BYE4 73 aa7.73□□□□□ -1.17
SSB-201ENST00000260956 KRTAP19-1Q8IUB9 90 aa7.72□□□□□ -1.17
SSB-201ENST00000260956 CAMK2N1Q7Z7J9 78 aa7.59□□□□□ -1.19
SSB-201ENST00000260956 H3BS24 57 aa7.52□□□□□ -1.21
SSB-201ENST00000260956 FCGBPQ9Y6R7 5405 aaPredicted RBP7.51□□□□□ -1.21
SSB-201ENST00000260956 KRTAP19-8Q3LI54 63 aa7.49□□□□□ -1.21
SSB-201ENST00000260956 MT1BP07438 61 aa7.38□□□□□ -1.23
SSB-201ENST00000260956 PLAC4Q8WY50 150 aa7.38□□□□□ -1.23
SSB-201ENST00000260956 PP632Q6XCG6 107 aa7.38□□□□□ -1.23
SSB-201ENST00000260956 KRTAP19-6Q3LI70 58 aa7.37□□□□□ -1.23
SSB-201ENST00000260956 KRTAP15-1Q3LI76 137 aa7.36□□□□□ -1.23
SSB-201ENST00000260956 TNP1P09430 55 aa7.33□□□□□ -1.24
SSB-201ENST00000260956 KRTAP23-1A1A580 65 aa7.32□□□□□ -1.24
SSB-201ENST00000260956 MT1XP80297 61 aa7.23□□□□□ -1.25
SSB-201ENST00000260956 MACF1Q9UPN3 7388 aaKnown RBP7.23□□□□□ -1.25
SSB-201ENST00000260956 KRTAP10-5P60370 271 aa7.22□□□□□ -1.25
SSB-201ENST00000260956 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.21□□□□□ -1.26
SSB-201ENST00000260956 SYNE2Q8WXH0 6885 aaKnown RBP7.13□□□□□ -1.27
SSB-201ENST00000260956 LCE3AQ5TA76 89 aa7.07□□□□□ -1.28
SSB-201ENST00000260956 LOC100996750A0A140TA64 210 aa7.06□□□□□ -1.28
SSB-201ENST00000260956 KRTAP4-6Q9BYQ5 205 aa7.06□□□□□ -1.28
SSB-201ENST00000260956 KRTAP9-7A8MTY7 169 aa7.01□□□□□ -1.29
SSB-201ENST00000260956 KRTAP8-1Q8IUC2 63 aa6.97□□□□□ -1.29
SSB-201ENST00000260956 KRTAP10-7P60409 375 aaPredicted RBP6.94□□□□□ -1.3
SSB-201ENST00000260956 SPRR5A0A1B0GTR4 108 aa6.9□□□□□ -1.3
SSB-201ENST00000260956 KRTAP10-12P60413 245 aa6.9□□□□□ -1.31
SSB-201ENST00000260956 KMT2DO14686 5537 aa6.88□□□□□ -1.31
SSB-201ENST00000260956 NDUFAF8A1L188 74 aa6.88□□□□□ -1.31
SSB-201ENST00000260956 PRO2289Q9P1D8 64 aa6.87□□□□□ -1.31
SSB-201ENST00000260956 KRTAP6-3Q3LI67 103 aa6.79□□□□□ -1.32
SSB-201ENST00000260956 MUC12Q9UKN1 5478 aa6.74□□□□□ -1.33
SSB-201ENST00000260956 KRTAP12-3P60328 96 aa6.73□□□□□ -1.33
SSB-201ENST00000260956 KRTAP4-8Q9BYQ9 185 aa6.65□□□□□ -1.34
SSB-201ENST00000260956 MDN1Q9NU22 5596 aa6.64□□□□□ -1.35
SSB-201ENST00000260956 KRTAP4-8A0A0G2JLE6 195 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms