RNA–Protein interactions for RNA: ENST00000248089.7

HCFC1R1-201, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene HCFC1R1, Length 965 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-201ENST00000248089 SPRR2GQ9BYE4 73 aa9.5□□□□□ -0.89
HCFC1R1-201ENST00000248089 LINC00208Q96KT6 92 aa9.48□□□□□ -0.89
HCFC1R1-201ENST00000248089 SYNE2Q8WXH0 6885 aaKnown RBP9.46□□□□□ -0.89
HCFC1R1-201ENST00000248089 MT1BP07438 61 aa9.46□□□□□ -0.9
HCFC1R1-201ENST00000248089 NDUFC1O43677 76 aa9.43□□□□□ -0.9
HCFC1R1-201ENST00000248089 KRTAP19-8Q3LI54 63 aa9.43□□□□□ -0.9
HCFC1R1-201ENST00000248089 MP68P56378 58 aa9.42□□□□□ -0.9
HCFC1R1-201ENST00000248089 OCR1Q9BZK8 76 aa9.42□□□□□ -0.9
HCFC1R1-201ENST00000248089 IMUPQ9GZP8 106 aa9.4□□□□□ -0.9
HCFC1R1-201ENST00000248089 A8MUN3 132 aa9.39□□□□□ -0.91
HCFC1R1-201ENST00000248089 J3QR89 54 aa9.39□□□□□ -0.91
HCFC1R1-201ENST00000248089 A6NN06 94 aa9.38□□□□□ -0.91
HCFC1R1-201ENST00000248089 CRIPTQ9P021 101 aa9.35□□□□□ -0.91
HCFC1R1-201ENST00000248089 H0YAA0 97 aa9.29□□□□□ -0.92
HCFC1R1-201ENST00000248089 SCGB1A1P11684 91 aa9.27□□□□□ -0.93
HCFC1R1-201ENST00000248089 KRTAP6-3Q3LI67 103 aa9.27□□□□□ -0.93
HCFC1R1-201ENST00000248089 ADM2Q7Z4H4 148 aa9.26□□□□□ -0.93
HCFC1R1-201ENST00000248089 H3BPC8 53 aa9.24□□□□□ -0.93
HCFC1R1-201ENST00000248089 KRTAP10-5P60370 271 aa9.24□□□□□ -0.93
HCFC1R1-201ENST00000248089 DMAC1Q96GE9 116 aa9.15□□□□□ -0.94
HCFC1R1-201ENST00000248089 MT-ATP8P03928 68 aa9.07□□□□□ -0.96
HCFC1R1-201ENST00000248089 P0C880 135 aa9.04□□□□□ -0.96
HCFC1R1-201ENST00000248089 C20orf197Q8N268 126 aa9.03□□□□□ -0.96
HCFC1R1-201ENST00000248089 R4GN34 69 aa9.03□□□□□ -0.96
HCFC1R1-201ENST00000248089 K7ERU9 68 aa9.02□□□□□ -0.97
HCFC1R1-201ENST00000248089 TRAV7A0A075B6U4 112 aa8.98□□□□□ -0.97
HCFC1R1-201ENST00000248089 M0QZ58 72 aa8.97□□□□□ -0.97
HCFC1R1-201ENST00000248089 SMIM20Q8N5G0 67 aa8.97□□□□□ -0.97
HCFC1R1-201ENST00000248089 PLAC4Q8WY50 150 aa8.96□□□□□ -0.98
HCFC1R1-201ENST00000248089 ACYP2P14621 99 aa8.93□□□□□ -0.98
HCFC1R1-201ENST00000248089 KRTAP3-2Q9BYR7 98 aa8.93□□□□□ -0.98
HCFC1R1-201ENST00000248089 PRO2289Q9P1D8 64 aa8.92□□□□□ -0.98
HCFC1R1-201ENST00000248089 MT1XP80297 61 aa8.88□□□□□ -0.99
HCFC1R1-201ENST00000248089 MUC12Q9UKN1 5478 aa8.87□□□□□ -0.99
HCFC1R1-201ENST00000248089 LINC01554Q52M75 96 aa8.87□□□□□ -0.99
HCFC1R1-201ENST00000248089 NEBP20929 6669 aa8.86□□□□□ -0.99
HCFC1R1-201ENST00000248089 KRTAP5-9P26371 169 aa8.85□□□□□ -0.99
HCFC1R1-201ENST00000248089 SNURFQ9Y675 71 aa8.85□□□□□ -0.99
HCFC1R1-201ENST00000248089 SPTSSBQ8NFR3 76 aa8.84□□□□□ -0.99
HCFC1R1-201ENST00000248089 CHKB-CPT1BH3BT56 60 aa8.82□□□□□ -1
HCFC1R1-201ENST00000248089 KMT2DO14686 5537 aa8.73□□□□□ -1.01
HCFC1R1-201ENST00000248089 SERP2Q8N6R1 65 aa8.68□□□□□ -1.02
HCFC1R1-201ENST00000248089 SPANXA2-OT1Q8N9U9 137 aa8.67□□□□□ -1.02
HCFC1R1-201ENST00000248089 SPRR2FQ96RM1 72 aa8.66□□□□□ -1.02
HCFC1R1-201ENST00000248089 KRTAP12-2P59991 146 aa8.64□□□□□ -1.03
HCFC1R1-201ENST00000248089 MDN1Q9NU22 5596 aa8.63□□□□□ -1.03
HCFC1R1-201ENST00000248089 KRTAP20-1Q3LI63 56 aa8.63□□□□□ -1.03
HCFC1R1-201ENST00000248089 KRTAP8-1Q8IUC2 63 aa8.63□□□□□ -1.03
HCFC1R1-201ENST00000248089 SPRR2EP22531 72 aa8.53□□□□□ -1.04
HCFC1R1-201ENST00000248089 SPRR2BP35325 72 aa8.53□□□□□ -1.04
HCFC1R1-201ENST00000248089 SPRR2AP35326 72 aa8.53□□□□□ -1.04
HCFC1R1-201ENST00000248089 KRTAP4-8A0A0G2JLE6 195 aa8.51□□□□□ -1.05
HCFC1R1-201ENST00000248089 KRTAP4-8Q9BYQ9 185 aa8.51□□□□□ -1.05
HCFC1R1-201ENST00000248089 KRTAP10-7P60409 375 aaPredicted RBP8.49□□□□□ -1.05
HCFC1R1-201ENST00000248089 COA5Q86WW8 74 aa8.47□□□□□ -1.05
HCFC1R1-201ENST00000248089 KRTAP13-4Q3LI77 160 aa8.45□□□□□ -1.06
HCFC1R1-201ENST00000248089 KRTAP10-12P60413 245 aa8.42□□□□□ -1.06
HCFC1R1-201ENST00000248089 COX7CP15954 63 aa8.4□□□□□ -1.06
HCFC1R1-201ENST00000248089 LCE1AQ5T7P2 110 aa8.38□□□□□ -1.07
HCFC1R1-201ENST00000248089 KRTAP2-3P0C7H8 128 aa8.37□□□□□ -1.07
HCFC1R1-201ENST00000248089 KRTAP2-4Q9BYR9 128 aa8.37□□□□□ -1.07
HCFC1R1-201ENST00000248089 SEC61GP60059 68 aa8.33□□□□□ -1.08
HCFC1R1-201ENST00000248089 CAMK2N1Q7Z7J9 78 aa8.33□□□□□ -1.08
HCFC1R1-201ENST00000248089 SERP1Q9Y6X1 66 aa8.31□□□□□ -1.08
HCFC1R1-201ENST00000248089 CYSTM1Q9H1C7 97 aa8.3□□□□□ -1.08
HCFC1R1-201ENST00000248089 H7BZZ5 65 aa8.28□□□□□ -1.08
HCFC1R1-201ENST00000248089 SPRR2DP22532 72 aa8.25□□□□□ -1.09
HCFC1R1-201ENST00000248089 A0A0D9SG42 100 aa8.24□□□□□ -1.09
HCFC1R1-201ENST00000248089 SPATA8Q6RVD6 105 aa8.2□□□□□ -1.1
HCFC1R1-201ENST00000248089 A0A1B0GU33 70 aa8.17□□□□□ -1.1
HCFC1R1-201ENST00000248089 ANAPC13Q9BS18 74 aa8.14□□□□□ -1.11
HCFC1R1-201ENST00000248089 SPINT4Q6UDR6 99 aa8.11□□□□□ -1.11
HCFC1R1-201ENST00000248089 KRTAP2-2Q9BYT5 123 aa8.1□□□□□ -1.11
HCFC1R1-201ENST00000248089 KRTAP2-1Q9BYU5 128 aa8.1□□□□□ -1.11
HCFC1R1-201ENST00000248089 A0A1B0GU69 56 aa8.05□□□□□ -1.12
HCFC1R1-201ENST00000248089 KRTAP12-1P59990 96 aa8.02□□□□□ -1.13
HCFC1R1-201ENST00000248089 LCE3BQ5TA77 95 aa8.01□□□□□ -1.13
HCFC1R1-201ENST00000248089 CCDC179H3BU77 68 aa7.97□□□□□ -1.13
HCFC1R1-201ENST00000248089 SMIM26A0A096LP01 95 aa7.94□□□□□ -1.14
HCFC1R1-201ENST00000248089 KRTAP19-7Q3SYF9 63 aa7.92□□□□□ -1.14
HCFC1R1-201ENST00000248089 A8MU10 97 aa7.9□□□□□ -1.14
HCFC1R1-201ENST00000248089 MT1EP04732 61 aa7.87□□□□□ -1.15
HCFC1R1-201ENST00000248089 ATP5EP56381 51 aaPredicted RBP7.86□□□□□ -1.15
HCFC1R1-201ENST00000248089 PRR15LQ9BU68 103 aa7.81□□□□□ -1.16
HCFC1R1-201ENST00000248089 LCE5AQ5TCM9 118 aa7.8□□□□□ -1.16
HCFC1R1-201ENST00000248089 KRTAP19-3Q7Z4W3 81 aa7.8□□□□□ -1.16
HCFC1R1-201ENST00000248089 KRTAP19-5Q3LI72 72 aa7.76□□□□□ -1.17
HCFC1R1-201ENST00000248089 LINC01558Q9Y6Z2 57 aa7.69□□□□□ -1.18
HCFC1R1-201ENST00000248089 TMEM258P61165 79 aa7.66□□□□□ -1.18
HCFC1R1-201ENST00000248089 C10orf95Q9H7T3 257 aa7.66□□□□□ -1.18
HCFC1R1-201ENST00000248089 DSTQ03001 7570 aaKnown RBP7.65□□□□□ -1.18
HCFC1R1-201ENST00000248089 TNP1P09430 55 aa7.65□□□□□ -1.18
HCFC1R1-201ENST00000248089 LCE3AQ5TA76 89 aa7.62□□□□□ -1.19
HCFC1R1-201ENST00000248089 MT1GP13640 62 aa7.6□□□□□ -1.19
HCFC1R1-201ENST00000248089 PP632Q6XCG6 107 aa7.57□□□□□ -1.2
HCFC1R1-201ENST00000248089 UQCR11O14957 56 aa7.53□□□□□ -1.2
HCFC1R1-201ENST00000248089 MT1LQ93083 61 aa7.53□□□□□ -1.2
HCFC1R1-201ENST00000248089 MT1MQ8N339 61 aa7.5□□□□□ -1.21
HCFC1R1-201ENST00000248089 KRTAP4-9Q9BYQ8 210 aa7.46□□□□□ -1.22
HCFC1R1-201ENST00000248089 MIR22HGQ0VDD5 57 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms