RNA–Protein interactions for RNA: ENST00000243050.5

NR4A1-201, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NR4A1, Length 2,678 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-201ENST00000243050 LINC00304Q8N9R0 145 aa7.41□□□□□ -1.22
NR4A1-201ENST00000243050 KRTAP25-1Q3LHN0 102 aa7.39□□□□□ -1.23
NR4A1-201ENST00000243050 PKHD1L1Q86WI1 4243 aa7.37□□□□□ -1.23
NR4A1-201ENST00000243050 FAT3Q8TDW7 4589 aa7.37□□□□□ -1.23
NR4A1-201ENST00000243050 IGKV2D-30A0A075B6S6 120 aa7.31□□□□□ -1.24
NR4A1-201ENST00000243050 IGKV2-30P06310 120 aa7.31□□□□□ -1.24
NR4A1-201ENST00000243050 A8MUU9 505 aa7.3□□□□□ -1.24
NR4A1-201ENST00000243050 MT1HL1P0DM35 61 aa7.3□□□□□ -1.24
NR4A1-201ENST00000243050 P0C880 135 aa7.29□□□□□ -1.24
NR4A1-201ENST00000243050 C9orf92A6NGG3 77 aa7.28□□□□□ -1.24
NR4A1-201ENST00000243050 TNXBP22105 4242 aa7.27□□□□□ -1.25
NR4A1-201ENST00000243050 RPS29P62273 56 aaKnown RBP7.27□□□□□ -1.25
NR4A1-201ENST00000243050 KRTAP10-8P60410 259 aa7.24□□□□□ -1.25
NR4A1-201ENST00000243050 H0YAA0 97 aa7.22□□□□□ -1.25
NR4A1-201ENST00000243050 CRIPTQ9P021 101 aa7.18□□□□□ -1.26
NR4A1-201ENST00000243050 LRP2P98164 4655 aa7.13□□□□□ -1.27
NR4A1-201ENST00000243050 C20orf166-AS1Q96NR2 134 aa7.12□□□□□ -1.27
NR4A1-201ENST00000243050 HMCN2Q8NDA2 5059 aa7.11□□□□□ -1.27
NR4A1-201ENST00000243050 UBR4Q5T4S7 5183 aa7.11□□□□□ -1.27
NR4A1-201ENST00000243050 LPAP08519 4548 aa7.09□□□□□ -1.28
NR4A1-201ENST00000243050 A0A1B0GU33 70 aa7.04□□□□□ -1.28
NR4A1-201ENST00000243050 RNF213Q63HN8 5207 aa7.03□□□□□ -1.28
NR4A1-201ENST00000243050 SPINT4Q6UDR6 99 aa7.01□□□□□ -1.29
NR4A1-201ENST00000243050 H1FX-AS1Q4G0G2 97 aa7□□□□□ -1.29
NR4A1-201ENST00000243050 NDUFAF8A1L188 74 aa7□□□□□ -1.29
NR4A1-201ENST00000243050 K7ERS5 55 aa6.99□□□□□ -1.29
NR4A1-201ENST00000243050 A0A0A0MQY5 61 aa6.96□□□□□ -1.29
NR4A1-201ENST00000243050 KRTAP3-1Q9BYR8 98 aa6.96□□□□□ -1.3
NR4A1-201ENST00000243050 MUC2Q02817 5179 aa6.96□□□□□ -1.3
NR4A1-201ENST00000243050 TPRXLQ17RH7 258 aa6.9□□□□□ -1.3
NR4A1-201ENST00000243050 KRTAP15-1Q3LI76 137 aa6.9□□□□□ -1.31
NR4A1-201ENST00000243050 XP32Q5T750 250 aa6.9□□□□□ -1.31
NR4A1-201ENST00000243050 RPL37P61927 97 aaKnown RBP6.87□□□□□ -1.31
NR4A1-201ENST00000243050 COX6B2Q6YFQ2 88 aa6.84□□□□□ -1.31
NR4A1-201ENST00000243050 C10orf95Q9H7T3 257 aa6.81□□□□□ -1.32
NR4A1-201ENST00000243050 A0A0D9SG42 100 aa6.67□□□□□ -1.34
NR4A1-201ENST00000243050 KRTAP3-3Q9BYR6 98 aa6.67□□□□□ -1.34
NR4A1-201ENST00000243050 KRTAP13-4Q3LI77 160 aa6.65□□□□□ -1.34
NR4A1-201ENST00000243050 S4R3F8 94 aa6.63□□□□□ -1.35
NR4A1-201ENST00000243050 FAT4Q6V0I7 4981 aa6.61□□□□□ -1.35
NR4A1-201ENST00000243050 KRTAP10-6P60371 365 aaPredicted RBP6.6□□□□□ -1.35
NR4A1-201ENST00000243050 LUZP6Q538Z0 58 aa6.59□□□□□ -1.35
NR4A1-201ENST00000243050 SEC61BP60468 96 aaKnown RBP6.58□□□□□ -1.36
NR4A1-201ENST00000243050 KRTAP4-1Q9BYQ7 146 aa6.56□□□□□ -1.36
NR4A1-201ENST00000243050 KRTAP3-2Q9BYR7 98 aa6.51□□□□□ -1.37
NR4A1-201ENST00000243050 MUC17Q685J3 4493 aa6.48□□□□□ -1.37
NR4A1-201ENST00000243050 KRTAP9-6A0A140TA67 174 aa6.48□□□□□ -1.37
NR4A1-201ENST00000243050 KRTAP12-2P59991 146 aa6.48□□□□□ -1.37
NR4A1-201ENST00000243050 KRTAP9-2Q9BYQ4 174 aa6.47□□□□□ -1.37
NR4A1-201ENST00000243050 KRTAP12-1P59990 96 aa6.38□□□□□ -1.39
NR4A1-201ENST00000243050 PLAC4Q8WY50 150 aa6.28□□□□□ -1.4
NR4A1-201ENST00000243050 KRTAP19-2Q3LHN2 52 aa6.28□□□□□ -1.4
NR4A1-201ENST00000243050 LCE2CQ5TA81 110 aa6.27□□□□□ -1.41
NR4A1-201ENST00000243050 LCE2AQ5TA79 106 aaPredicted RBP6.26□□□□□ -1.41
NR4A1-201ENST00000243050 M0R2T5 61 aa6.24□□□□□ -1.41
NR4A1-201ENST00000243050 LCE2DQ5TA82 110 aaPredicted RBP6.24□□□□□ -1.41
NR4A1-201ENST00000243050 M0QZ58 72 aa6.23□□□□□ -1.41
NR4A1-201ENST00000243050 MT1HP80294 61 aa6.2□□□□□ -1.42
NR4A1-201ENST00000243050 LORP23490 312 aaPredicted RBP6.18□□□□□ -1.42
NR4A1-201ENST00000243050 R4GN34 69 aa6.16□□□□□ -1.42
NR4A1-201ENST00000243050 FSIP2Q5CZC0 6907 aa6.14□□□□□ -1.43
NR4A1-201ENST00000243050 FLGP20930 4061 aaPredicted RBP6.13□□□□□ -1.43
NR4A1-201ENST00000243050 CRCT1Q9UGL9 99 aa6.07□□□□□ -1.44
NR4A1-201ENST00000243050 PP632Q6XCG6 107 aa6.02□□□□□ -1.45
NR4A1-201ENST00000243050 KRTAP9-8Q9BYQ0 159 aa5.9□□□□□ -1.47
NR4A1-201ENST00000243050 USH2AO75445 5202 aa5.87□□□□□ -1.47
NR4A1-201ENST00000243050 KRTAP10-10P60014 251 aa5.86□□□□□ -1.47
NR4A1-201ENST00000243050 MT2AP02795 61 aa5.84□□□□□ -1.47
NR4A1-201ENST00000243050 CAMK2N1Q7Z7J9 78 aa5.83□□□□□ -1.48
NR4A1-201ENST00000243050 MT1FP04733 61 aa5.82□□□□□ -1.48
NR4A1-201ENST00000243050 SPRR5A0A1B0GTR4 108 aa5.77□□□□□ -1.49
NR4A1-201ENST00000243050 KRTAP23-1A1A580 65 aa5.75□□□□□ -1.49
NR4A1-201ENST00000243050 PRO2289Q9P1D8 64 aa5.74□□□□□ -1.49
NR4A1-201ENST00000243050 KRTAP9-7A8MTY7 169 aa5.74□□□□□ -1.49
NR4A1-201ENST00000243050 KRTAP19-1Q8IUB9 90 aa5.7□□□□□ -1.5
NR4A1-201ENST00000243050 KRTAP9-3Q9BYQ3 159 aa5.69□□□□□ -1.5
NR4A1-201ENST00000243050 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.68□□□□□ -1.5
NR4A1-201ENST00000243050 SPRR2GQ9BYE4 73 aa5.67□□□□□ -1.5
NR4A1-201ENST00000243050 LCE2BO14633 110 aa5.66□□□□□ -1.5
NR4A1-201ENST00000243050 SSPOA2VEC9 5147 aa5.63□□□□□ -1.51
NR4A1-201ENST00000243050 INE1O15225 51 aa5.58□□□□□ -1.52
NR4A1-201ENST00000243050 TNP1P09430 55 aa5.55□□□□□ -1.52
NR4A1-201ENST00000243050 FCGBPQ9Y6R7 5405 aaPredicted RBP5.48□□□□□ -1.53
NR4A1-201ENST00000243050 KRTAP19-8Q3LI54 63 aa5.44□□□□□ -1.54
NR4A1-201ENST00000243050 MT1BP07438 61 aa5.43□□□□□ -1.54
NR4A1-201ENST00000243050 MT1XP80297 61 aa5.35□□□□□ -1.55
NR4A1-201ENST00000243050 KRTAP10-5P60370 271 aa5.34□□□□□ -1.55
NR4A1-201ENST00000243050 MACF1Q9UPN3 7388 aaKnown RBP5.34□□□□□ -1.55
NR4A1-201ENST00000243050 LCE3AQ5TA76 89 aa5.33□□□□□ -1.56
NR4A1-201ENST00000243050 KRTAP19-6Q3LI70 58 aa5.31□□□□□ -1.56
NR4A1-201ENST00000243050 SYNE2Q8WXH0 6885 aaKnown RBP5.31□□□□□ -1.56
NR4A1-201ENST00000243050 KRTAP6-3Q3LI67 103 aa5.3□□□□□ -1.56
NR4A1-201ENST00000243050 KMT2DO14686 5537 aa5.22□□□□□ -1.57
NR4A1-201ENST00000243050 KRTAP10-7P60409 375 aaPredicted RBP5.21□□□□□ -1.58
NR4A1-201ENST00000243050 KRTAP10-12P60413 245 aa5.18□□□□□ -1.58
NR4A1-201ENST00000243050 KRTAP8-1Q8IUC2 63 aa5.13□□□□□ -1.59
NR4A1-201ENST00000243050 KRTAP12-3P60328 96 aa5.06□□□□□ -1.6
NR4A1-201ENST00000243050 KRTAP20-1Q3LI63 56 aa5.06□□□□□ -1.6
NR4A1-201ENST00000243050 MUC12Q9UKN1 5478 aa5.01□□□□□ -1.61
NR4A1-201ENST00000243050 NEBP20929 6669 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms