RNA–Protein interactions for RNA: ENST00000230480.10

VEGFA-201, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-201ENST00000230480 WFDC13Q8IUB5 93 aa7.07□□□□□ -1.28
VEGFA-201ENST00000230480 A8MWP4 228 aa7.06□□□□□ -1.28
VEGFA-201ENST00000230480 LORP23490 312 aaPredicted RBP7.06□□□□□ -1.28
VEGFA-201ENST00000230480 CHKB-CPT1BH3BT56 60 aa7.05□□□□□ -1.28
VEGFA-201ENST00000230480 PRR15LQ9BU68 103 aa7.04□□□□□ -1.28
VEGFA-201ENST00000230480 C8orf87E5RJ46 101 aa7.01□□□□□ -1.29
VEGFA-201ENST00000230480 COA5Q86WW8 74 aa7.01□□□□□ -1.29
VEGFA-201ENST00000230480 TP53AIP1Q9HCN2 124 aa7.01□□□□□ -1.29
VEGFA-201ENST00000230480 CDC42SE1Q9NRR8 79 aa7.01□□□□□ -1.29
VEGFA-201ENST00000230480 LINC01558Q9Y6Z2 57 aa7□□□□□ -1.29
VEGFA-201ENST00000230480 A6NN06 94 aa6.98□□□□□ -1.29
VEGFA-201ENST00000230480 C8orf17Q9NRJ1 99 aa6.98□□□□□ -1.29
VEGFA-201ENST00000230480 MMP24-AS1A0A0U1RRL7 71 aa6.97□□□□□ -1.29
VEGFA-201ENST00000230480 HRES1P13985 223 aa6.97□□□□□ -1.29
VEGFA-201ENST00000230480 KRTAP10-6P60371 365 aaPredicted RBP6.97□□□□□ -1.29
VEGFA-201ENST00000230480 A6NED7 52 aa6.96□□□□□ -1.3
VEGFA-201ENST00000230480 LCA10Q71F78 164 aa6.94□□□□□ -1.3
VEGFA-201ENST00000230480 C7orf65Q6ZTY9 151 aa6.93□□□□□ -1.3
VEGFA-201ENST00000230480 RBM12B-AS1Q9P1G2 102 aa6.92□□□□□ -1.3
VEGFA-201ENST00000230480 COX6B2Q6YFQ2 88 aa6.9□□□□□ -1.3
VEGFA-201ENST00000230480 SPTSSBQ8NFR3 76 aa6.9□□□□□ -1.3
VEGFA-201ENST00000230480 A8MU10 97 aa6.89□□□□□ -1.31
VEGFA-201ENST00000230480 M0R2T5 61 aa6.87□□□□□ -1.31
VEGFA-201ENST00000230480 CRCT1Q9UGL9 99 aa6.86□□□□□ -1.31
VEGFA-201ENST00000230480 SPINK7P58062 85 aa6.85□□□□□ -1.31
VEGFA-201ENST00000230480 MRPL34Q9BQ48 92 aaKnown RBP6.85□□□□□ -1.31
VEGFA-201ENST00000230480 KRTAP9-8Q9BYQ0 159 aa6.84□□□□□ -1.31
VEGFA-201ENST00000230480 Q5W150 140 aa6.83□□□□□ -1.32
VEGFA-201ENST00000230480 FSIP2Q5CZC0 6907 aa6.83□□□□□ -1.32
VEGFA-201ENST00000230480 USH2AO75445 5202 aa6.73□□□□□ -1.33
VEGFA-201ENST00000230480 ACYP2P14621 99 aa6.73□□□□□ -1.33
VEGFA-201ENST00000230480 MT2AP02795 61 aa6.72□□□□□ -1.33
VEGFA-201ENST00000230480 MT1FP04733 61 aa6.68□□□□□ -1.34
VEGFA-201ENST00000230480 DMAC1Q96GE9 116 aa6.68□□□□□ -1.34
VEGFA-201ENST00000230480 SSPOA2VEC9 5147 aa6.65□□□□□ -1.34
VEGFA-201ENST00000230480 SPATA8Q6RVD6 105 aa6.65□□□□□ -1.34
VEGFA-201ENST00000230480 IGKV2D-30A0A075B6S6 120 aa6.62□□□□□ -1.35
VEGFA-201ENST00000230480 IGKV2-30P06310 120 aa6.62□□□□□ -1.35
VEGFA-201ENST00000230480 KRTAP9-3Q9BYQ3 159 aa6.62□□□□□ -1.35
VEGFA-201ENST00000230480 KRTAP3-1Q9BYR8 98 aa6.62□□□□□ -1.35
VEGFA-201ENST00000230480 A0A1B0GU69 56 aa6.6□□□□□ -1.35
VEGFA-201ENST00000230480 LINC01554Q52M75 96 aa6.57□□□□□ -1.36
VEGFA-201ENST00000230480 UQCR11O14957 56 aa6.56□□□□□ -1.36
VEGFA-201ENST00000230480 H1FX-AS1Q4G0G2 97 aa6.56□□□□□ -1.36
VEGFA-201ENST00000230480 MIR22HGQ0VDD5 57 aa6.54□□□□□ -1.36
VEGFA-201ENST00000230480 PRAC1Q96KF2 57 aa6.51□□□□□ -1.37
VEGFA-201ENST00000230480 KRTAP10-10P60014 251 aa6.5□□□□□ -1.37
VEGFA-201ENST00000230480 ADM2Q7Z4H4 148 aa6.42□□□□□ -1.38
VEGFA-201ENST00000230480 FCGBPQ9Y6R7 5405 aaPredicted RBP6.41□□□□□ -1.38
VEGFA-201ENST00000230480 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.39□□□□□ -1.39
VEGFA-201ENST00000230480 KRTAP9-7A8MTY7 169 aa6.35□□□□□ -1.39
VEGFA-201ENST00000230480 CSAG1Q6PB30 78 aa6.34□□□□□ -1.39
VEGFA-201ENST00000230480 KRTAP19-1Q8IUB9 90 aa6.34□□□□□ -1.39
VEGFA-201ENST00000230480 S4R3F8 94 aa6.31□□□□□ -1.4
VEGFA-201ENST00000230480 H3BS24 57 aa6.28□□□□□ -1.4
VEGFA-201ENST00000230480 KRTAP19-6Q3LI70 58 aa6.25□□□□□ -1.41
VEGFA-201ENST00000230480 KRTAP25-1Q3LHN0 102 aa6.24□□□□□ -1.41
VEGFA-201ENST00000230480 H0YAA0 97 aa6.19□□□□□ -1.42
VEGFA-201ENST00000230480 MT1BP07438 61 aa6.19□□□□□ -1.42
VEGFA-201ENST00000230480 SPRR2GQ9BYE4 73 aa6.18□□□□□ -1.42
VEGFA-201ENST00000230480 KRTAP19-8Q3LI54 63 aa6.16□□□□□ -1.42
VEGFA-201ENST00000230480 MACF1Q9UPN3 7388 aaKnown RBP6.16□□□□□ -1.42
VEGFA-201ENST00000230480 A0A1B0GU33 70 aa6.15□□□□□ -1.42
VEGFA-201ENST00000230480 K7ERS5 55 aa6.15□□□□□ -1.42
VEGFA-201ENST00000230480 LOC100996750A0A140TA64 210 aa6.14□□□□□ -1.43
VEGFA-201ENST00000230480 KRTAP4-6Q9BYQ5 205 aa6.14□□□□□ -1.43
VEGFA-201ENST00000230480 SYNE2Q8WXH0 6885 aaKnown RBP6.13□□□□□ -1.43
VEGFA-201ENST00000230480 ROMO1P60602 79 aa6.12□□□□□ -1.43
VEGFA-201ENST00000230480 CRIPTQ9P021 101 aa5.99□□□□□ -1.45
VEGFA-201ENST00000230480 P0C880 135 aa5.97□□□□□ -1.45
VEGFA-201ENST00000230480 KRTAP6-3Q3LI67 103 aa5.96□□□□□ -1.46
VEGFA-201ENST00000230480 KRTAP10-5P60370 271 aa5.95□□□□□ -1.46
VEGFA-201ENST00000230480 MT1XP80297 61 aa5.81□□□□□ -1.48
VEGFA-201ENST00000230480 SPINT4Q6UDR6 99 aa5.8□□□□□ -1.48
VEGFA-201ENST00000230480 NEBP20929 6669 aa5.77□□□□□ -1.49
VEGFA-201ENST00000230480 M0QZ58 72 aa5.75□□□□□ -1.49
VEGFA-201ENST00000230480 R4GN34 69 aa5.75□□□□□ -1.49
VEGFA-201ENST00000230480 KRTAP15-1Q3LI76 137 aa5.74□□□□□ -1.49
VEGFA-201ENST00000230480 KRTAP4-8Q9BYQ9 185 aa5.74□□□□□ -1.49
VEGFA-201ENST00000230480 KMT2DO14686 5537 aa5.74□□□□□ -1.49
VEGFA-201ENST00000230480 MUC12Q9UKN1 5478 aa5.73□□□□□ -1.49
VEGFA-201ENST00000230480 KRTAP13-4Q3LI77 160 aa5.72□□□□□ -1.49
VEGFA-201ENST00000230480 A0A0D9SG42 100 aa5.67□□□□□ -1.5
VEGFA-201ENST00000230480 KRTAP5-9P26371 169 aa5.66□□□□□ -1.5
VEGFA-201ENST00000230480 PLAC4Q8WY50 150 aa5.65□□□□□ -1.5
VEGFA-201ENST00000230480 KRTAP4-12Q9BQ66 201 aa5.62□□□□□ -1.51
VEGFA-201ENST00000230480 NDUFAF8A1L188 74 aa5.61□□□□□ -1.51
VEGFA-201ENST00000230480 C10orf95Q9H7T3 257 aa5.6□□□□□ -1.51
VEGFA-201ENST00000230480 KRTAP12-1P59990 96 aa5.59□□□□□ -1.51
VEGFA-201ENST00000230480 KRTAP12-2P59991 146 aa5.59□□□□□ -1.51
VEGFA-201ENST00000230480 KRTAP19-4Q3LI73 84 aa5.58□□□□□ -1.52
VEGFA-201ENST00000230480 KRTAP20-1Q3LI63 56 aa5.57□□□□□ -1.52
VEGFA-201ENST00000230480 PRO2289Q9P1D8 64 aa5.57□□□□□ -1.52
VEGFA-201ENST00000230480 MDN1Q9NU22 5596 aa5.57□□□□□ -1.52
VEGFA-201ENST00000230480 KRTAP4-8A0A0G2JLE6 195 aa5.56□□□□□ -1.52
VEGFA-201ENST00000230480 KRTAP10-7P60409 375 aaPredicted RBP5.55□□□□□ -1.52
VEGFA-201ENST00000230480 KRTAP10-12P60413 245 aa5.5□□□□□ -1.53
VEGFA-201ENST00000230480 LCE3BQ5TA77 95 aa5.5□□□□□ -1.53
VEGFA-201ENST00000230480 SPRR2FQ96RM1 72 aa5.43□□□□□ -1.54
VEGFA-201ENST00000230480 KRTAP8-1Q8IUC2 63 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms