RNA–Protein interactions for RNA: ENST00000227065.8

FAM149A-201, Transcript of family with sequence similarity 149 member A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene FAM149A, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM149A-201ENST00000227065 KRTAP13-4Q3LI77 160 aa13.94□□□□□ -0.18
FAM149A-201ENST00000227065 KRTAP3-3Q9BYR6 98 aa13.94□□□□□ -0.18
FAM149A-201ENST00000227065 FAT3Q8TDW7 4589 aa13.93□□□□□ -0.18
FAM149A-201ENST00000227065 A0A0D9SG42 100 aa13.93□□□□□ -0.18
FAM149A-201ENST00000227065 MYCBP2O75592 4640 aa13.85□□□□□ -0.19
FAM149A-201ENST00000227065 RPL37P61927 97 aaKnown RBP13.84□□□□□ -0.19
FAM149A-201ENST00000227065 KRTAP10-8P60410 259 aa13.83□□□□□ -0.2
FAM149A-201ENST00000227065 TNXBP22105 4242 aa13.83□□□□□ -0.2
FAM149A-201ENST00000227065 KRTAP3-2Q9BYR7 98 aa13.8□□□□□ -0.2
FAM149A-201ENST00000227065 RYR2Q92736 4967 aa13.77□□□□□ -0.2
FAM149A-201ENST00000227065 XP32Q5T750 250 aa13.74□□□□□ -0.21
FAM149A-201ENST00000227065 S4R3F8 94 aa13.73□□□□□ -0.21
FAM149A-201ENST00000227065 KRTAP21-3Q3LHN1 58 aa13.71□□□□□ -0.21
FAM149A-201ENST00000227065 P0C880 135 aa13.7□□□□□ -0.22
FAM149A-201ENST00000227065 KMT2CQ8NEZ4 4911 aaKnown RBP13.67□□□□□ -0.22
FAM149A-201ENST00000227065 TPRXLQ17RH7 258 aa13.64□□□□□ -0.23
FAM149A-201ENST00000227065 Q5VSD8 79 aa13.64□□□□□ -0.23
FAM149A-201ENST00000227065 C10orf95Q9H7T3 257 aa13.61□□□□□ -0.23
FAM149A-201ENST00000227065 KRTAP12-2P59991 146 aa13.5□□□□□ -0.25
FAM149A-201ENST00000227065 LPAP08519 4548 aa13.46□□□□□ -0.25
FAM149A-201ENST00000227065 SPINT4Q6UDR6 99 aa13.46□□□□□ -0.26
FAM149A-201ENST00000227065 KRTAP17-1Q9BYP8 105 aa13.43□□□□□ -0.26
FAM149A-201ENST00000227065 KRTAP12-1P59990 96 aa13.32□□□□□ -0.28
FAM149A-201ENST00000227065 MT1HL1P0DM35 61 aa13.31□□□□□ -0.28
FAM149A-201ENST00000227065 LRP2P98164 4655 aa13.29□□□□□ -0.28
FAM149A-201ENST00000227065 RYR1P21817 5038 aa13.28□□□□□ -0.28
FAM149A-201ENST00000227065 KIAA1109Q2LD37 5005 aa13.16□□□□□ -0.3
FAM149A-201ENST00000227065 RYR3Q15413 4870 aa13.14□□□□□ -0.31
FAM149A-201ENST00000227065 KRTAP15-1Q3LI76 137 aa13.09□□□□□ -0.31
FAM149A-201ENST00000227065 M0QZ58 72 aa13.07□□□□□ -0.32
FAM149A-201ENST00000227065 NDUFAF8A1L188 74 aa13.02□□□□□ -0.33
FAM149A-201ENST00000227065 ABCA13Q86UQ4 5058 aa12.87□□□□□ -0.35
FAM149A-201ENST00000227065 R4GN34 69 aa12.8□□□□□ -0.36
FAM149A-201ENST00000227065 LORP23490 312 aaPredicted RBP12.7□□□□□ -0.38
FAM149A-201ENST00000227065 EPPK1P58107 5090 aaKnown RBP12.68□□□□□ -0.38
FAM149A-201ENST00000227065 KRTAP4-5Q9BYR2 181 aa12.65□□□□□ -0.38
FAM149A-201ENST00000227065 MUC17Q685J3 4493 aa12.57□□□□□ -0.4
FAM149A-201ENST00000227065 SEC61BP60468 96 aaKnown RBP12.56□□□□□ -0.4
FAM149A-201ENST00000227065 KRTAP4-1Q9BYQ7 146 aa12.53□□□□□ -0.4
FAM149A-201ENST00000227065 PLAC4Q8WY50 150 aa12.38□□□□□ -0.43
FAM149A-201ENST00000227065 KRTAP19-2Q3LHN2 52 aa12.28□□□□□ -0.44
FAM149A-201ENST00000227065 J3QL48 77 aa12.22□□□□□ -0.45
FAM149A-201ENST00000227065 CAMK2N1Q7Z7J9 78 aa12.22□□□□□ -0.45
FAM149A-201ENST00000227065 MUC2Q02817 5179 aa12.19□□□□□ -0.46
FAM149A-201ENST00000227065 PP632Q6XCG6 107 aa12□□□□□ -0.49
FAM149A-201ENST00000227065 HERC2O95714 4834 aa11.99□□□□□ -0.49
FAM149A-201ENST00000227065 FLGP20930 4061 aaPredicted RBP11.89□□□□□ -0.51
FAM149A-201ENST00000227065 LUZP6Q538Z0 58 aa11.86□□□□□ -0.51
FAM149A-201ENST00000227065 PCLOQ9Y6V0 5065 aa11.77□□□□□ -0.53
FAM149A-201ENST00000227065 TNP1P09430 55 aa11.72□□□□□ -0.53
FAM149A-201ENST00000227065 BIRC6Q9NR09 4857 aa11.71□□□□□ -0.53
FAM149A-201ENST00000227065 FAT4Q6V0I7 4981 aa11.57□□□□□ -0.56
FAM149A-201ENST00000227065 HERC1Q15751 4861 aa11.57□□□□□ -0.56
FAM149A-201ENST00000227065 KRTAP23-1A1A580 65 aa11.48□□□□□ -0.57
FAM149A-201ENST00000227065 LCE2CQ5TA81 110 aa11.44□□□□□ -0.58
FAM149A-201ENST00000227065 A0A0A0MQY5 61 aa11.44□□□□□ -0.58
FAM149A-201ENST00000227065 SPRR5A0A1B0GTR4 108 aa11.37□□□□□ -0.59
FAM149A-201ENST00000227065 SPRR2GQ9BYE4 73 aa11.37□□□□□ -0.59
FAM149A-201ENST00000227065 HMCN2Q8NDA2 5059 aa11.35□□□□□ -0.59
FAM149A-201ENST00000227065 KRTAP19-1Q8IUB9 90 aa11.35□□□□□ -0.59
FAM149A-201ENST00000227065 M0R2T5 61 aa11.26□□□□□ -0.61
FAM149A-201ENST00000227065 LCE3AQ5TA76 89 aa11.16□□□□□ -0.62
FAM149A-201ENST00000227065 MT1HP80294 61 aa11.11□□□□□ -0.63
FAM149A-201ENST00000227065 RNF213Q63HN8 5207 aa11.1□□□□□ -0.63
FAM149A-201ENST00000227065 KRTAP10-10P60014 251 aa11.06□□□□□ -0.64
FAM149A-201ENST00000227065 MT1FP04733 61 aa11.05□□□□□ -0.64
FAM149A-201ENST00000227065 MT2AP02795 61 aa11.01□□□□□ -0.65
FAM149A-201ENST00000227065 UBR4Q5T4S7 5183 aa10.95□□□□□ -0.66
FAM149A-201ENST00000227065 KRTAP9-8Q9BYQ0 159 aa10.91□□□□□ -0.66
FAM149A-201ENST00000227065 KRTAP19-8Q3LI54 63 aa10.79□□□□□ -0.68
FAM149A-201ENST00000227065 KRTAP8-1Q8IUC2 63 aa10.76□□□□□ -0.69
FAM149A-201ENST00000227065 KRTAP10-5P60370 271 aa10.73□□□□□ -0.69
FAM149A-201ENST00000227065 MT1BP07438 61 aa10.71□□□□□ -0.69
FAM149A-201ENST00000227065 MT1XP80297 61 aa10.7□□□□□ -0.7
FAM149A-201ENST00000227065 KRTAP12-3P60328 96 aa10.56□□□□□ -0.72
FAM149A-201ENST00000227065 KRTAP10-12P60413 245 aa10.56□□□□□ -0.72
FAM149A-201ENST00000227065 KRTAP10-7P60409 375 aaPredicted RBP10.47□□□□□ -0.73
FAM149A-201ENST00000227065 KRTAP9-3Q9BYQ3 159 aa10.42□□□□□ -0.74
FAM149A-201ENST00000227065 PRO2289Q9P1D8 64 aa10.34□□□□□ -0.75
FAM149A-201ENST00000227065 INE1O15225 51 aa10.2□□□□□ -0.78
FAM149A-201ENST00000227065 KMT2DO14686 5537 aa10.1□□□□□ -0.79
FAM149A-201ENST00000227065 USH2AO75445 5202 aa10.07□□□□□ -0.8
FAM149A-201ENST00000227065 KRTAP19-5Q3LI72 72 aa10.06□□□□□ -0.8
FAM149A-201ENST00000227065 LCE2BO14633 110 aa10.01□□□□□ -0.81
FAM149A-201ENST00000227065 LCE3CQ5T5A8 94 aa9.93□□□□□ -0.82
FAM149A-201ENST00000227065 KRTAP4-8A0A0G2JLE6 195 aa9.83□□□□□ -0.84
FAM149A-201ENST00000227065 KRTAP4-8Q9BYQ9 185 aa9.83□□□□□ -0.84
FAM149A-201ENST00000227065 KRTAP9-6A8MVA2 160 aa9.74□□□□□ -0.85
FAM149A-201ENST00000227065 KRTAP4-7Q9BYR0 210 aa9.59□□□□□ -0.87
FAM149A-201ENST00000227065 LCE2AQ5TA79 106 aaPredicted RBP9.55□□□□□ -0.88
FAM149A-201ENST00000227065 KRTAP19-7Q3SYF9 63 aa9.54□□□□□ -0.88
FAM149A-201ENST00000227065 KRTAP2-3P0C7H8 128 aa9.35□□□□□ -0.91
FAM149A-201ENST00000227065 KRTAP2-4Q9BYR9 128 aa9.35□□□□□ -0.91
FAM149A-201ENST00000227065 KRTAP2-1Q9BYU5 128 aa9.35□□□□□ -0.91
FAM149A-201ENST00000227065 MT1LQ93083 61 aa9.26□□□□□ -0.93
FAM149A-201ENST00000227065 MT1EP04732 61 aa9.22□□□□□ -0.93
FAM149A-201ENST00000227065 KRTAP19-4Q3LI73 84 aa9.11□□□□□ -0.95
FAM149A-201ENST00000227065 SSPOA2VEC9 5147 aa9.08□□□□□ -0.96
FAM149A-201ENST00000227065 FSIP2Q5CZC0 6907 aa8.97□□□□□ -0.97
FAM149A-201ENST00000227065 LOC100996750A0A140TA64 210 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 1101.9 ms