RNA–Protein interactions for RNA: ENST00000221494.9

SF3A2-201, Transcript of splicing factor 3a subunit 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SF3A2, Length 1,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-201ENST00000221494 C20orf166-AS1Q96NR2 134 aa8.64□□□□□ -1.03
SF3A2-201ENST00000221494 A0A1B0GU33 70 aa8.62□□□□□ -1.03
SF3A2-201ENST00000221494 H1FX-AS1Q4G0G2 97 aa8.61□□□□□ -1.03
SF3A2-201ENST00000221494 LRP1Q07954 4544 aaKnown RBP8.57□□□□□ -1.04
SF3A2-201ENST00000221494 J3QL48 77 aa8.55□□□□□ -1.04
SF3A2-201ENST00000221494 K7ERS5 55 aa8.53□□□□□ -1.04
SF3A2-201ENST00000221494 KRTAP3-1Q9BYR8 98 aa8.53□□□□□ -1.04
SF3A2-201ENST00000221494 KRTAP10-8P60410 259 aa8.52□□□□□ -1.05
SF3A2-201ENST00000221494 TNXBP22105 4242 aa8.5□□□□□ -1.05
SF3A2-201ENST00000221494 FAT3Q8TDW7 4589 aa8.49□□□□□ -1.05
SF3A2-201ENST00000221494 LUZP6Q538Z0 58 aa8.48□□□□□ -1.05
SF3A2-201ENST00000221494 MYCBP2O75592 4640 aa8.47□□□□□ -1.05
SF3A2-201ENST00000221494 FLG2Q5D862 2391 aaPredicted RBP8.46□□□□□ -1.05
SF3A2-201ENST00000221494 COX6B2Q6YFQ2 88 aa8.46□□□□□ -1.06
SF3A2-201ENST00000221494 KRTAP4-5Q9BYR2 181 aa8.44□□□□□ -1.06
SF3A2-201ENST00000221494 NDUFAF8A1L188 74 aa8.41□□□□□ -1.06
SF3A2-201ENST00000221494 MT1HL1P0DM35 61 aa8.41□□□□□ -1.06
SF3A2-201ENST00000221494 C9orf92A6NGG3 77 aa8.4□□□□□ -1.06
SF3A2-201ENST00000221494 BIRC6Q9NR09 4857 aa8.4□□□□□ -1.07
SF3A2-201ENST00000221494 HERC2O95714 4834 aa8.34□□□□□ -1.08
SF3A2-201ENST00000221494 DMBT1Q9UGM3 2413 aaPredicted RBP8.32□□□□□ -1.08
SF3A2-201ENST00000221494 RPL37P61927 97 aaKnown RBP8.28□□□□□ -1.08
SF3A2-201ENST00000221494 ABCA13Q86UQ4 5058 aa8.28□□□□□ -1.08
SF3A2-201ENST00000221494 KRTAP10-6P60371 365 aaPredicted RBP8.22□□□□□ -1.09
SF3A2-201ENST00000221494 KRTAP15-1Q3LI76 137 aa8.22□□□□□ -1.09
SF3A2-201ENST00000221494 SPINT4Q6UDR6 99 aa8.18□□□□□ -1.1
SF3A2-201ENST00000221494 KRTAP3-3Q9BYR6 98 aa8.17□□□□□ -1.1
SF3A2-201ENST00000221494 KRTAP3-2Q9BYR7 98 aa8.13□□□□□ -1.11
SF3A2-201ENST00000221494 S4R3F8 94 aa8.11□□□□□ -1.11
SF3A2-201ENST00000221494 KRTAP13-4Q3LI77 160 aa8.1□□□□□ -1.11
SF3A2-201ENST00000221494 CRIPTQ9P021 101 aa8.08□□□□□ -1.12
SF3A2-201ENST00000221494 TPRXLQ17RH7 258 aa8.03□□□□□ -1.12
SF3A2-201ENST00000221494 XP32Q5T750 250 aa8.03□□□□□ -1.12
SF3A2-201ENST00000221494 A0A0D9SG42 100 aa8.01□□□□□ -1.13
SF3A2-201ENST00000221494 PCLOQ9Y6V0 5065 aa7.99□□□□□ -1.13
SF3A2-201ENST00000221494 LPAP08519 4548 aa7.95□□□□□ -1.14
SF3A2-201ENST00000221494 CAMK2N1Q7Z7J9 78 aa7.91□□□□□ -1.14
SF3A2-201ENST00000221494 LRP2P98164 4655 aa7.91□□□□□ -1.14
SF3A2-201ENST00000221494 M0QZ58 72 aa7.9□□□□□ -1.14
SF3A2-201ENST00000221494 KRTAP12-1P59990 96 aa7.88□□□□□ -1.15
SF3A2-201ENST00000221494 KRTAP12-2P59991 146 aa7.88□□□□□ -1.15
SF3A2-201ENST00000221494 HERC1Q15751 4861 aa7.87□□□□□ -1.15
SF3A2-201ENST00000221494 C10orf95Q9H7T3 257 aa7.83□□□□□ -1.16
SF3A2-201ENST00000221494 HMCN2Q8NDA2 5059 aa7.75□□□□□ -1.17
SF3A2-201ENST00000221494 MUC17Q685J3 4493 aa7.64□□□□□ -1.19
SF3A2-201ENST00000221494 KRTAP4-1Q9BYQ7 146 aa7.62□□□□□ -1.19
SF3A2-201ENST00000221494 MUC2Q02817 5179 aa7.51□□□□□ -1.21
SF3A2-201ENST00000221494 R4GN34 69 aa7.5□□□□□ -1.21
SF3A2-201ENST00000221494 KRTAP19-2Q3LHN2 52 aa7.43□□□□□ -1.22
SF3A2-201ENST00000221494 UBR4Q5T4S7 5183 aa7.41□□□□□ -1.22
SF3A2-201ENST00000221494 PP632Q6XCG6 107 aa7.4□□□□□ -1.22
SF3A2-201ENST00000221494 PLAC4Q8WY50 150 aa7.4□□□□□ -1.22
SF3A2-201ENST00000221494 PRO2289Q9P1D8 64 aa7.37□□□□□ -1.23
SF3A2-201ENST00000221494 RNF213Q63HN8 5207 aa7.33□□□□□ -1.24
SF3A2-201ENST00000221494 LCE2CQ5TA81 110 aa7.24□□□□□ -1.25
SF3A2-201ENST00000221494 FLGP20930 4061 aaPredicted RBP7.24□□□□□ -1.25
SF3A2-201ENST00000221494 LORP23490 312 aaPredicted RBP7.21□□□□□ -1.26
SF3A2-201ENST00000221494 KRTAP23-1A1A580 65 aa7.19□□□□□ -1.26
SF3A2-201ENST00000221494 FAT4Q6V0I7 4981 aa7.18□□□□□ -1.26
SF3A2-201ENST00000221494 MT1HP80294 61 aa7.07□□□□□ -1.28
SF3A2-201ENST00000221494 TNP1P09430 55 aa7□□□□□ -1.29
SF3A2-201ENST00000221494 SPRR5A0A1B0GTR4 108 aa6.97□□□□□ -1.29
SF3A2-201ENST00000221494 M0R2T5 61 aa6.96□□□□□ -1.3
SF3A2-201ENST00000221494 INE1O15225 51 aa6.95□□□□□ -1.3
SF3A2-201ENST00000221494 KRTAP9-8Q9BYQ0 159 aa6.83□□□□□ -1.32
SF3A2-201ENST00000221494 MT2AP02795 61 aa6.8□□□□□ -1.32
SF3A2-201ENST00000221494 LCE2AQ5TA79 106 aaPredicted RBP6.78□□□□□ -1.32
SF3A2-201ENST00000221494 MT1FP04733 61 aa6.76□□□□□ -1.33
SF3A2-201ENST00000221494 KRTAP10-10P60014 251 aa6.72□□□□□ -1.33
SF3A2-201ENST00000221494 SPRR2GQ9BYE4 73 aa6.71□□□□□ -1.34
SF3A2-201ENST00000221494 KRTAP19-1Q8IUB9 90 aa6.66□□□□□ -1.34
SF3A2-201ENST00000221494 KRTAP9-3Q9BYQ3 159 aa6.58□□□□□ -1.36
SF3A2-201ENST00000221494 KRTAP19-8Q3LI54 63 aa6.49□□□□□ -1.37
SF3A2-201ENST00000221494 LCE3AQ5TA76 89 aa6.48□□□□□ -1.37
SF3A2-201ENST00000221494 KRTAP8-1Q8IUC2 63 aa6.46□□□□□ -1.37
SF3A2-201ENST00000221494 MT1BP07438 61 aa6.41□□□□□ -1.38
SF3A2-201ENST00000221494 LCE2BO14633 110 aa6.39□□□□□ -1.39
SF3A2-201ENST00000221494 USH2AO75445 5202 aa6.24□□□□□ -1.41
SF3A2-201ENST00000221494 KRTAP12-3P60328 96 aa6.22□□□□□ -1.41
SF3A2-201ENST00000221494 KRTAP10-5P60370 271 aa6.21□□□□□ -1.42
SF3A2-201ENST00000221494 MT1XP80297 61 aa6.2□□□□□ -1.42
SF3A2-201ENST00000221494 KRTAP10-12P60413 245 aa6.2□□□□□ -1.42
SF3A2-201ENST00000221494 LCE2DQ5TA82 110 aaPredicted RBP6.13□□□□□ -1.43
SF3A2-201ENST00000221494 SSPOA2VEC9 5147 aa6.03□□□□□ -1.44
SF3A2-201ENST00000221494 FSIP2Q5CZC0 6907 aa6.02□□□□□ -1.45
SF3A2-201ENST00000221494 KRTAP19-6Q3LI70 58 aa5.98□□□□□ -1.45
SF3A2-201ENST00000221494 KRTAP10-7P60409 375 aaPredicted RBP5.97□□□□□ -1.45
SF3A2-201ENST00000221494 LCE3CQ5T5A8 94 aa5.89□□□□□ -1.47
SF3A2-201ENST00000221494 KRTAP9-2Q9BYQ4 174 aa5.88□□□□□ -1.47
SF3A2-201ENST00000221494 KRTAP19-4Q3LI73 84 aa5.82□□□□□ -1.48
SF3A2-201ENST00000221494 KRTAP19-5Q3LI72 72 aa5.8□□□□□ -1.48
SF3A2-201ENST00000221494 FCGBPQ9Y6R7 5405 aaPredicted RBP5.79□□□□□ -1.48
SF3A2-201ENST00000221494 KMT2DO14686 5537 aa5.75□□□□□ -1.49
SF3A2-201ENST00000221494 KRTAP4-8A0A0G2JLE6 195 aa5.74□□□□□ -1.49
SF3A2-201ENST00000221494 KRTAP4-8Q9BYQ9 185 aa5.74□□□□□ -1.49
SF3A2-201ENST00000221494 CRCT1Q9UGL9 99 aa5.67□□□□□ -1.5
SF3A2-201ENST00000221494 KRTAP2-3P0C7H8 128 aa5.66□□□□□ -1.5
SF3A2-201ENST00000221494 KRTAP2-4Q9BYR9 128 aa5.66□□□□□ -1.5
SF3A2-201ENST00000221494 KRTAP2-1Q9BYU5 128 aa5.66□□□□□ -1.5
SF3A2-201ENST00000221494 KRTAP9-6A8MVA2 160 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms