RNA–Protein interactions for RNA: ENST00000217260.8

RSPO4-201, Transcript of R-spondin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RSPO4, Length 2,707 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4-201ENST00000217260 LRP1Q07954 4544 aaKnown RBP9.56□□□□□ -0.88
RSPO4-201ENST00000217260 Q5VSD8 79 aa9.55□□□□□ -0.88
RSPO4-201ENST00000217260 TNXBP22105 4242 aa9.54□□□□□ -0.88
RSPO4-201ENST00000217260 P0C880 135 aa9.53□□□□□ -0.88
RSPO4-201ENST00000217260 FAT3Q8TDW7 4589 aa9.52□□□□□ -0.89
RSPO4-201ENST00000217260 RPL37P61927 97 aaKnown RBP9.49□□□□□ -0.89
RSPO4-201ENST00000217260 DMBT1Q9UGM3 2413 aaPredicted RBP9.49□□□□□ -0.89
RSPO4-201ENST00000217260 XP32Q5T750 250 aa9.45□□□□□ -0.9
RSPO4-201ENST00000217260 HSPG2P98160 4391 aa9.43□□□□□ -0.9
RSPO4-201ENST00000217260 SPINT4Q6UDR6 99 aa9.41□□□□□ -0.9
RSPO4-201ENST00000217260 KRTAP3-3Q9BYR6 98 aa9.41□□□□□ -0.9
RSPO4-201ENST00000217260 A0A0D9SG42 100 aa9.38□□□□□ -0.91
RSPO4-201ENST00000217260 KRTAP17-1Q9BYP8 105 aa9.35□□□□□ -0.91
RSPO4-201ENST00000217260 TPRXLQ17RH7 258 aa9.35□□□□□ -0.91
RSPO4-201ENST00000217260 KRTAP10-6P60371 365 aaPredicted RBP9.34□□□□□ -0.91
RSPO4-201ENST00000217260 KRTAP13-4Q3LI77 160 aa9.33□□□□□ -0.92
RSPO4-201ENST00000217260 S4R3F8 94 aa9.33□□□□□ -0.92
RSPO4-201ENST00000217260 MYCBP2O75592 4640 aa9.32□□□□□ -0.92
RSPO4-201ENST00000217260 MT1HL1P0DM35 61 aa9.28□□□□□ -0.92
RSPO4-201ENST00000217260 KRTAP3-2Q9BYR7 98 aa9.26□□□□□ -0.93
RSPO4-201ENST00000217260 C10orf95Q9H7T3 257 aa9.25□□□□□ -0.93
RSPO4-201ENST00000217260 RYR1P21817 5038 aa9.25□□□□□ -0.93
RSPO4-201ENST00000217260 RYR3Q15413 4870 aa9.21□□□□□ -0.94
RSPO4-201ENST00000217260 NDUFAF8A1L188 74 aa9.16□□□□□ -0.94
RSPO4-201ENST00000217260 KRTAP15-1Q3LI76 137 aa9.16□□□□□ -0.94
RSPO4-201ENST00000217260 KIAA1109Q2LD37 5005 aa9.14□□□□□ -0.95
RSPO4-201ENST00000217260 KRTAP12-2P59991 146 aa9.08□□□□□ -0.96
RSPO4-201ENST00000217260 LPAP08519 4548 aa9.07□□□□□ -0.96
RSPO4-201ENST00000217260 LRP2P98164 4655 aa9.03□□□□□ -0.96
RSPO4-201ENST00000217260 KRTAP12-1P59990 96 aa8.98□□□□□ -0.97
RSPO4-201ENST00000217260 EPPK1P58107 5090 aaKnown RBP8.88□□□□□ -0.99
RSPO4-201ENST00000217260 KRTAP4-5Q9BYR2 181 aa8.88□□□□□ -0.99
RSPO4-201ENST00000217260 M0QZ58 72 aa8.86□□□□□ -0.99
RSPO4-201ENST00000217260 ABCA13Q86UQ4 5058 aa8.84□□□□□ -0.99
RSPO4-201ENST00000217260 SEC61BP60468 96 aaKnown RBP8.75□□□□□ -1.01
RSPO4-201ENST00000217260 R4GN34 69 aa8.67□□□□□ -1.02
RSPO4-201ENST00000217260 KRTAP4-1Q9BYQ7 146 aa8.65□□□□□ -1.03
RSPO4-201ENST00000217260 J3QL48 77 aa8.62□□□□□ -1.03
RSPO4-201ENST00000217260 MUC17Q685J3 4493 aa8.62□□□□□ -1.03
RSPO4-201ENST00000217260 PLAC4Q8WY50 150 aa8.59□□□□□ -1.03
RSPO4-201ENST00000217260 LORP23490 312 aaPredicted RBP8.56□□□□□ -1.04
RSPO4-201ENST00000217260 KRTAP19-2Q3LHN2 52 aa8.48□□□□□ -1.05
RSPO4-201ENST00000217260 LUZP6Q538Z0 58 aa8.41□□□□□ -1.06
RSPO4-201ENST00000217260 HERC2O95714 4834 aa8.41□□□□□ -1.06
RSPO4-201ENST00000217260 A0A0A0MQY5 61 aa8.39□□□□□ -1.07
RSPO4-201ENST00000217260 PP632Q6XCG6 107 aa8.29□□□□□ -1.08
RSPO4-201ENST00000217260 MUC2Q02817 5179 aa8.29□□□□□ -1.08
RSPO4-201ENST00000217260 CAMK2N1Q7Z7J9 78 aa8.23□□□□□ -1.09
RSPO4-201ENST00000217260 FLGP20930 4061 aaPredicted RBP8.21□□□□□ -1.09
RSPO4-201ENST00000217260 BIRC6Q9NR09 4857 aa8.15□□□□□ -1.1
RSPO4-201ENST00000217260 HERC1Q15751 4861 aa8.01□□□□□ -1.13
RSPO4-201ENST00000217260 PCLOQ9Y6V0 5065 aa7.99□□□□□ -1.13
RSPO4-201ENST00000217260 LCE2CQ5TA81 110 aa7.98□□□□□ -1.13
RSPO4-201ENST00000217260 HMCN2Q8NDA2 5059 aa7.94□□□□□ -1.14
RSPO4-201ENST00000217260 TNP1P09430 55 aa7.93□□□□□ -1.14
RSPO4-201ENST00000217260 KRTAP23-1A1A580 65 aa7.86□□□□□ -1.15
RSPO4-201ENST00000217260 FAT4Q6V0I7 4981 aa7.85□□□□□ -1.15
RSPO4-201ENST00000217260 SPRR5A0A1B0GTR4 108 aa7.85□□□□□ -1.15
RSPO4-201ENST00000217260 SPRR2GQ9BYE4 73 aa7.84□□□□□ -1.15
RSPO4-201ENST00000217260 M0R2T5 61 aa7.83□□□□□ -1.16
RSPO4-201ENST00000217260 KRTAP19-1Q8IUB9 90 aa7.8□□□□□ -1.16
RSPO4-201ENST00000217260 MT1HP80294 61 aa7.76□□□□□ -1.17
RSPO4-201ENST00000217260 KRTAP10-10P60014 251 aa7.66□□□□□ -1.18
RSPO4-201ENST00000217260 MT1FP04733 61 aa7.65□□□□□ -1.18
RSPO4-201ENST00000217260 MT2AP02795 61 aa7.65□□□□□ -1.19
RSPO4-201ENST00000217260 RNF213Q63HN8 5207 aa7.62□□□□□ -1.19
RSPO4-201ENST00000217260 UBR4Q5T4S7 5183 aa7.61□□□□□ -1.19
RSPO4-201ENST00000217260 KRTAP9-8Q9BYQ0 159 aa7.59□□□□□ -1.19
RSPO4-201ENST00000217260 LCE3AQ5TA76 89 aa7.5□□□□□ -1.21
RSPO4-201ENST00000217260 KRTAP19-8Q3LI54 63 aa7.48□□□□□ -1.21
RSPO4-201ENST00000217260 PRO2289Q9P1D8 64 aa7.47□□□□□ -1.21
RSPO4-201ENST00000217260 MT1BP07438 61 aa7.39□□□□□ -1.23
RSPO4-201ENST00000217260 KRTAP10-5P60370 271 aa7.36□□□□□ -1.23
RSPO4-201ENST00000217260 MT1XP80297 61 aa7.34□□□□□ -1.23
RSPO4-201ENST00000217260 INE1O15225 51 aa7.33□□□□□ -1.24
RSPO4-201ENST00000217260 KRTAP8-1Q8IUC2 63 aa7.3□□□□□ -1.24
RSPO4-201ENST00000217260 KRTAP9-3Q9BYQ3 159 aa7.27□□□□□ -1.25
RSPO4-201ENST00000217260 KRTAP10-12P60413 245 aa7.21□□□□□ -1.26
RSPO4-201ENST00000217260 KRTAP10-7P60409 375 aaPredicted RBP7.14□□□□□ -1.27
RSPO4-201ENST00000217260 KRTAP12-3P60328 96 aa7.14□□□□□ -1.27
RSPO4-201ENST00000217260 LCE2BO14633 110 aa6.98□□□□□ -1.29
RSPO4-201ENST00000217260 KRTAP19-5Q3LI72 72 aa6.85□□□□□ -1.31
RSPO4-201ENST00000217260 LCE2AQ5TA79 106 aaPredicted RBP6.84□□□□□ -1.32
RSPO4-201ENST00000217260 USH2AO75445 5202 aa6.8□□□□□ -1.32
RSPO4-201ENST00000217260 LCE3CQ5T5A8 94 aa6.72□□□□□ -1.33
RSPO4-201ENST00000217260 KRTAP4-8A0A0G2JLE6 195 aa6.71□□□□□ -1.34
RSPO4-201ENST00000217260 KRTAP4-8Q9BYQ9 185 aa6.71□□□□□ -1.34
RSPO4-201ENST00000217260 KMT2DO14686 5537 aa6.7□□□□□ -1.34
RSPO4-201ENST00000217260 KRTAP19-7Q3SYF9 63 aa6.54□□□□□ -1.36
RSPO4-201ENST00000217260 KRTAP9-6A8MVA2 160 aa6.48□□□□□ -1.37
RSPO4-201ENST00000217260 KRTAP4-7Q9BYR0 210 aa6.42□□□□□ -1.38
RSPO4-201ENST00000217260 KRTAP2-3P0C7H8 128 aa6.36□□□□□ -1.39
RSPO4-201ENST00000217260 KRTAP2-4Q9BYR9 128 aa6.36□□□□□ -1.39
RSPO4-201ENST00000217260 KRTAP2-1Q9BYU5 128 aa6.36□□□□□ -1.39
RSPO4-201ENST00000217260 MT1LQ93083 61 aa6.35□□□□□ -1.39
RSPO4-201ENST00000217260 MT1EP04732 61 aa6.35□□□□□ -1.39
RSPO4-201ENST00000217260 KRTAP19-4Q3LI73 84 aa6.34□□□□□ -1.4
RSPO4-201ENST00000217260 SSPOA2VEC9 5147 aa6.33□□□□□ -1.4
RSPO4-201ENST00000217260 LCE2DQ5TA82 110 aaPredicted RBP6.27□□□□□ -1.41
RSPO4-201ENST00000217260 KRTAP19-6Q3LI70 58 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms