RNA–Protein interactions for RNA: ENST00000216840.10

RABGGTA-201, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RABGGTA, Length 2,088 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-201ENST00000216840 A6NED7 52 aa8.79□□□□□ -1
RABGGTA-201ENST00000216840 PMAIP1Q13794 54 aa8.76□□□□□ -1.01
RABGGTA-201ENST00000216840 A8MU10 97 aa8.73□□□□□ -1.01
RABGGTA-201ENST00000216840 LCA10Q71F78 164 aa8.71□□□□□ -1.01
RABGGTA-201ENST00000216840 PCLOQ9Y6V0 5065 aa8.71□□□□□ -1.02
RABGGTA-201ENST00000216840 SEC61BP60468 96 aaKnown RBP8.7□□□□□ -1.02
RABGGTA-201ENST00000216840 KRTAP3-3Q9BYR6 98 aa8.67□□□□□ -1.02
RABGGTA-201ENST00000216840 CDC42SE1Q9NRR8 79 aa8.67□□□□□ -1.02
RABGGTA-201ENST00000216840 H1FX-AS1Q4G0G2 97 aa8.65□□□□□ -1.02
RABGGTA-201ENST00000216840 S4R3F8 94 aa8.65□□□□□ -1.02
RABGGTA-201ENST00000216840 RBM12B-AS1Q9P1G2 102 aa8.64□□□□□ -1.03
RABGGTA-201ENST00000216840 UQCR11O14957 56 aa8.58□□□□□ -1.04
RABGGTA-201ENST00000216840 MUC17Q685J3 4493 aa8.58□□□□□ -1.04
RABGGTA-201ENST00000216840 KRTAP4-1Q9BYQ7 146 aa8.58□□□□□ -1.04
RABGGTA-201ENST00000216840 SPATA8Q6RVD6 105 aa8.55□□□□□ -1.04
RABGGTA-201ENST00000216840 MIR22HGQ0VDD5 57 aa8.52□□□□□ -1.05
RABGGTA-201ENST00000216840 HERC1Q15751 4861 aa8.48□□□□□ -1.05
RABGGTA-201ENST00000216840 A0A1B0GU33 70 aa8.47□□□□□ -1.05
RABGGTA-201ENST00000216840 KTN1-AS1Q86SY8 53 aa8.47□□□□□ -1.05
RABGGTA-201ENST00000216840 HMCN2Q8NDA2 5059 aa8.44□□□□□ -1.06
RABGGTA-201ENST00000216840 KRTAP10-6P60371 365 aaPredicted RBP8.44□□□□□ -1.06
RABGGTA-201ENST00000216840 KRTAP3-2Q9BYR7 98 aa8.44□□□□□ -1.06
RABGGTA-201ENST00000216840 CSAG1Q6PB30 78 aa8.42□□□□□ -1.06
RABGGTA-201ENST00000216840 H0YAA0 97 aa8.41□□□□□ -1.06
RABGGTA-201ENST00000216840 KRTAP19-2Q3LHN2 52 aa8.39□□□□□ -1.07
RABGGTA-201ENST00000216840 A6NN06 94 aa8.34□□□□□ -1.07
RABGGTA-201ENST00000216840 P0C880 135 aa8.33□□□□□ -1.08
RABGGTA-201ENST00000216840 ADM2Q7Z4H4 148 aa8.32□□□□□ -1.08
RABGGTA-201ENST00000216840 KRTAP13-4Q3LI77 160 aa8.26□□□□□ -1.09
RABGGTA-201ENST00000216840 MUC2Q02817 5179 aa8.23□□□□□ -1.09
RABGGTA-201ENST00000216840 FLGP20930 4061 aaPredicted RBP8.18□□□□□ -1.1
RABGGTA-201ENST00000216840 A0A0D9SG42 100 aa8.12□□□□□ -1.11
RABGGTA-201ENST00000216840 M0QZ58 72 aa8.09□□□□□ -1.11
RABGGTA-201ENST00000216840 LCE2CQ5TA81 110 aa8.08□□□□□ -1.12
RABGGTA-201ENST00000216840 K7ERS5 55 aa8.04□□□□□ -1.12
RABGGTA-201ENST00000216840 RNF213Q63HN8 5207 aa8.03□□□□□ -1.12
RABGGTA-201ENST00000216840 UBR4Q5T4S7 5183 aa8.01□□□□□ -1.13
RABGGTA-201ENST00000216840 LORP23490 312 aaPredicted RBP8.01□□□□□ -1.13
RABGGTA-201ENST00000216840 R4GN34 69 aa7.98□□□□□ -1.13
RABGGTA-201ENST00000216840 KRTAP12-2P59991 146 aa7.94□□□□□ -1.14
RABGGTA-201ENST00000216840 KRTAP12-1P59990 96 aa7.94□□□□□ -1.14
RABGGTA-201ENST00000216840 LINC01554Q52M75 96 aa7.9□□□□□ -1.14
RABGGTA-201ENST00000216840 PRAC1Q96KF2 57 aa7.9□□□□□ -1.15
RABGGTA-201ENST00000216840 SPINT4Q6UDR6 99 aa7.89□□□□□ -1.15
RABGGTA-201ENST00000216840 MT1HP80294 61 aa7.88□□□□□ -1.15
RABGGTA-201ENST00000216840 FAT4Q6V0I7 4981 aa7.88□□□□□ -1.15
RABGGTA-201ENST00000216840 H3BS24 57 aa7.82□□□□□ -1.16
RABGGTA-201ENST00000216840 M0R2T5 61 aa7.81□□□□□ -1.16
RABGGTA-201ENST00000216840 ROMO1P60602 79 aa7.8□□□□□ -1.16
RABGGTA-201ENST00000216840 CRIPTQ9P021 101 aa7.79□□□□□ -1.16
RABGGTA-201ENST00000216840 MT2AP02795 61 aa7.64□□□□□ -1.19
RABGGTA-201ENST00000216840 KRTAP9-8Q9BYQ0 159 aa7.64□□□□□ -1.19
RABGGTA-201ENST00000216840 KRTAP25-1Q3LHN0 102 aa7.61□□□□□ -1.19
RABGGTA-201ENST00000216840 MT1FP04733 61 aa7.61□□□□□ -1.19
RABGGTA-201ENST00000216840 SPRR2GQ9BYE4 73 aa7.59□□□□□ -1.19
RABGGTA-201ENST00000216840 KRTAP10-10P60014 251 aa7.58□□□□□ -1.2
RABGGTA-201ENST00000216840 KRTAP19-1Q8IUB9 90 aa7.58□□□□□ -1.2
RABGGTA-201ENST00000216840 C10orf95Q9H7T3 257 aa7.51□□□□□ -1.21
RABGGTA-201ENST00000216840 CAMK2N1Q7Z7J9 78 aa7.5□□□□□ -1.21
RABGGTA-201ENST00000216840 LCE2AQ5TA79 106 aaPredicted RBP7.43□□□□□ -1.22
RABGGTA-201ENST00000216840 PLAC4Q8WY50 150 aa7.39□□□□□ -1.23
RABGGTA-201ENST00000216840 KRTAP19-8Q3LI54 63 aa7.36□□□□□ -1.23
RABGGTA-201ENST00000216840 KRTAP9-3Q9BYQ3 159 aa7.35□□□□□ -1.23
RABGGTA-201ENST00000216840 MT1BP07438 61 aa7.26□□□□□ -1.25
RABGGTA-201ENST00000216840 TNP1P09430 55 aa7.18□□□□□ -1.26
RABGGTA-201ENST00000216840 LCE2BO14633 110 aa7.12□□□□□ -1.27
RABGGTA-201ENST00000216840 PP632Q6XCG6 107 aa7.09□□□□□ -1.27
RABGGTA-201ENST00000216840 MT1XP80297 61 aa7.08□□□□□ -1.28
RABGGTA-201ENST00000216840 KRTAP10-5P60370 271 aa7.08□□□□□ -1.28
RABGGTA-201ENST00000216840 KRTAP23-1A1A580 65 aa7.02□□□□□ -1.29
RABGGTA-201ENST00000216840 PRO2289Q9P1D8 64 aa6.91□□□□□ -1.3
RABGGTA-201ENST00000216840 LCE3AQ5TA76 89 aa6.87□□□□□ -1.31
RABGGTA-201ENST00000216840 LCE2DQ5TA82 110 aaPredicted RBP6.86□□□□□ -1.31
RABGGTA-201ENST00000216840 USH2AO75445 5202 aa6.86□□□□□ -1.31
RABGGTA-201ENST00000216840 KRTAP15-1Q3LI76 137 aa6.84□□□□□ -1.31
RABGGTA-201ENST00000216840 KRTAP10-7P60409 375 aaPredicted RBP6.83□□□□□ -1.32
RABGGTA-201ENST00000216840 NDUFAF8A1L188 74 aa6.81□□□□□ -1.32
RABGGTA-201ENST00000216840 KRTAP10-12P60413 245 aa6.78□□□□□ -1.32
RABGGTA-201ENST00000216840 KRTAP8-1Q8IUC2 63 aa6.72□□□□□ -1.33
RABGGTA-201ENST00000216840 KRTAP9-2Q9BYQ4 174 aa6.67□□□□□ -1.34
RABGGTA-201ENST00000216840 A0A0A0MQY5 61 aa6.65□□□□□ -1.34
RABGGTA-201ENST00000216840 SSPOA2VEC9 5147 aa6.63□□□□□ -1.35
RABGGTA-201ENST00000216840 KRTAP19-6Q3LI70 58 aa6.58□□□□□ -1.36
RABGGTA-201ENST00000216840 KRTAP12-3P60328 96 aa6.57□□□□□ -1.36
RABGGTA-201ENST00000216840 KRTAP4-8A0A0G2JLE6 195 aa6.51□□□□□ -1.37
RABGGTA-201ENST00000216840 KRTAP4-8Q9BYQ9 185 aa6.51□□□□□ -1.37
RABGGTA-201ENST00000216840 KRTAP19-5Q3LI72 72 aa6.47□□□□□ -1.37
RABGGTA-201ENST00000216840 LUZP6Q538Z0 58 aa6.46□□□□□ -1.38
RABGGTA-201ENST00000216840 KMT2DO14686 5537 aa6.46□□□□□ -1.38
RABGGTA-201ENST00000216840 FSIP2Q5CZC0 6907 aa6.46□□□□□ -1.38
RABGGTA-201ENST00000216840 SPRR5A0A1B0GTR4 108 aa6.44□□□□□ -1.38
RABGGTA-201ENST00000216840 CRCT1Q9UGL9 99 aa6.41□□□□□ -1.38
RABGGTA-201ENST00000216840 KRTAP19-7Q3SYF9 63 aa6.32□□□□□ -1.4
RABGGTA-201ENST00000216840 FCGBPQ9Y6R7 5405 aaPredicted RBP6.26□□□□□ -1.41
RABGGTA-201ENST00000216840 KRTAP9-6A0A140TA67 174 aa6.24□□□□□ -1.41
RABGGTA-201ENST00000216840 MT1EP04732 61 aa6.18□□□□□ -1.42
RABGGTA-201ENST00000216840 LCE3CQ5T5A8 94 aa6.16□□□□□ -1.42
RABGGTA-201ENST00000216840 MT1LQ93083 61 aa6.1□□□□□ -1.43
RABGGTA-201ENST00000216840 KRTAP19-4Q3LI73 84 aa6.04□□□□□ -1.44
RABGGTA-201ENST00000216840 KRTAP4-7Q9BYR0 210 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms