RNA–Protein interactions for RNA: ENSMUST00000225246.1

Ssr1-203, Transcript of Translocon-associated protein subunit alpha, mousemouse

BASIC

Gene Ssr1, Length 1,825 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1-203ENSMUST00000225246 Gnb1lQ9EQ15 326 aa10.17□□□□□ -0.78
Ssr1-203ENSMUST00000225246 OtorQ9JIE3 128 aa10.17□□□□□ -0.78
Ssr1-203ENSMUST00000225246 AtrxQ61687 2476 aaKnown RBP10.16□□□□□ -0.78
Ssr1-203ENSMUST00000225246 Med12A2AGH6 2190 aa10.16□□□□□ -0.78
Ssr1-203ENSMUST00000225246 Ighv3-1A0A075B5S6 116 aa10.16□□□□□ -0.78
Ssr1-203ENSMUST00000225246 Ighv1-31A0A0A6YWK5 117 aa10.16□□□□□ -0.78
Ssr1-203ENSMUST00000225246 Ighv6-7A0A0A6YWU3 119 aa10.16□□□□□ -0.78
Ssr1-203ENSMUST00000225246 Gm15293D3YX02 93 aa10.16□□□□□ -0.78
Ssr1-203ENSMUST00000225246 Fosl1P48755 273 aa10.16□□□□□ -0.78
Ssr1-203ENSMUST00000225246 Gng4P50153 75 aa10.16□□□□□ -0.78
Ssr1-203ENSMUST00000225246 Gm5941Q497P9 117 aa10.16□□□□□ -0.78
Ssr1-203ENSMUST00000225246 Foxc2Q61850 494 aa10.16□□□□□ -0.78
Ssr1-203ENSMUST00000225246 Il22ra1Q80XZ4 581 aa10.16□□□□□ -0.78
Ssr1-203ENSMUST00000225246 Tppp3Q9CRB6 176 aaKnown RBP10.16□□□□□ -0.78
Ssr1-203ENSMUST00000225246 Pla2g2dQ9WVF6 144 aa10.16□□□□□ -0.78
Ssr1-203ENSMUST00000225246 Usp24B1AY13 2617 aaKnown RBP10.16□□□□□ -0.78
Ssr1-203ENSMUST00000225246 Tln2Q71LX4 2375 aa10.15□□□□□ -0.78
Ssr1-203ENSMUST00000225246 Ighv1-4A0A075B5T4 117 aa10.15□□□□□ -0.78
Ssr1-203ENSMUST00000225246 Defa9P50707 93 aa10.15□□□□□ -0.78
Ssr1-203ENSMUST00000225246 Srsf1Q6PDM2 248 aaKnown RBP10.15□□□□□ -0.78
Ssr1-203ENSMUST00000225246 Prima1Q810F0 153 aa10.15□□□□□ -0.78
Ssr1-203ENSMUST00000225246 Trpt1Q8K3A2 249 aa10.15□□□□□ -0.78
Ssr1-203ENSMUST00000225246 Q9CX25 107 aa10.15□□□□□ -0.78
Ssr1-203ENSMUST00000225246 AcacaQ5SWU9 2345 aa10.15□□□□□ -0.78
Ssr1-203ENSMUST00000225246 Gm28038F7BCN9 126 aa10.14□□□□□ -0.79
Ssr1-203ENSMUST00000225246 Cox11Q6P8I6 275 aa10.14□□□□□ -0.79
Ssr1-203ENSMUST00000225246 Snrnp40Q6PE01 358 aa10.14□□□□□ -0.79
Ssr1-203ENSMUST00000225246 Psmb11Q8BG41 302 aa10.14□□□□□ -0.79
Ssr1-203ENSMUST00000225246 Cby1Q9D1C2 127 aa10.14□□□□□ -0.79
Ssr1-203ENSMUST00000225246 Vmn1r63Q9EPT1 300 aa10.14□□□□□ -0.79
Ssr1-203ENSMUST00000225246 Dkk2Q9QYZ8 259 aa10.14□□□□□ -0.79
Ssr1-203ENSMUST00000225246 Zfhx4Q9JJN2 3550 aa10.14□□□□□ -0.79
Ssr1-203ENSMUST00000225246 BptfA2A654 3036 aaKnown RBP10.14□□□□□ -0.79
Ssr1-203ENSMUST00000225246 Ighv1-53A0A075B5W3 117 aa10.14□□□□□ -0.79
Ssr1-203ENSMUST00000225246 Gm5157A0A087WRH8 301 aa10.14□□□□□ -0.79
Ssr1-203ENSMUST00000225246 RbpjP31266 526 aa10.14□□□□□ -0.79
Ssr1-203ENSMUST00000225246 Prrx2Q06348 247 aa10.14□□□□□ -0.79
Ssr1-203ENSMUST00000225246 Tmem88bQ3TYP4 173 aa10.14□□□□□ -0.79
Ssr1-203ENSMUST00000225246 Q3UNZ8 350 aa10.14□□□□□ -0.79
Ssr1-203ENSMUST00000225246 Olfr322Q5NCC8 327 aa10.14□□□□□ -0.79
Ssr1-203ENSMUST00000225246 Olfr317Q5NCD6 327 aa10.14□□□□□ -0.79
Ssr1-203ENSMUST00000225246 FshbQ60687 130 aa10.14□□□□□ -0.79
Ssr1-203ENSMUST00000225246 TctaQ8VEA7 122 aa10.14□□□□□ -0.79
Ssr1-203ENSMUST00000225246 Spcs1Q9D958 161 aa10.14□□□□□ -0.79
Ssr1-203ENSMUST00000225246 Gm26938S4R185 226 aa10.14□□□□□ -0.79
Ssr1-203ENSMUST00000225246 Igkv4-57A0A0A6YYE7 117 aa10.13□□□□□ -0.79
Ssr1-203ENSMUST00000225246 Igkv4-59A0A0B4J1I8 117 aa10.13□□□□□ -0.79
Ssr1-203ENSMUST00000225246 Bak1O08734 209 aa10.13□□□□□ -0.79
Ssr1-203ENSMUST00000225246 Thy1P01831 162 aa10.13□□□□□ -0.79
Ssr1-203ENSMUST00000225246 Cox7cP17665 63 aa10.13□□□□□ -0.79
Ssr1-203ENSMUST00000225246 Khdc1aQ3UWR2 166 aa10.13□□□□□ -0.79
Ssr1-203ENSMUST00000225246 Htr1dQ61224 374 aa10.13□□□□□ -0.79
Ssr1-203ENSMUST00000225246 Smr3aQ61900 147 aa10.13□□□□□ -0.79
Ssr1-203ENSMUST00000225246 Vmn1r62Q8R2C0 300 aa10.13□□□□□ -0.79
Ssr1-203ENSMUST00000225246 PerpQ9JK95 193 aa10.13□□□□□ -0.79
Ssr1-203ENSMUST00000225246 Dopey2Q3UHQ6 2295 aa10.13□□□□□ -0.79
Ssr1-203ENSMUST00000225246 Ros1Q78DX7 2340 aa10.13□□□□□ -0.79
Ssr1-203ENSMUST00000225246 Trav16d-dv11A0A075B617 117 aa10.12□□□□□ -0.79
Ssr1-203ENSMUST00000225246 Gm17359A0A0G2JEB7 487 aa10.12□□□□□ -0.79
Ssr1-203ENSMUST00000225246 Tmem8bB1AWJ5 472 aa10.12□□□□□ -0.79
Ssr1-203ENSMUST00000225246 Zfand3Q497H0 227 aa10.12□□□□□ -0.79
Ssr1-203ENSMUST00000225246 Minos1Q7TNS2 76 aa10.12□□□□□ -0.79
Ssr1-203ENSMUST00000225246 Chac1Q8R3J5 223 aa10.12□□□□□ -0.79
Ssr1-203ENSMUST00000225246 Tmem97Q8VD00 176 aa10.12□□□□□ -0.79
Ssr1-203ENSMUST00000225246 Bub3Q9WVA3 326 aa10.12□□□□□ -0.79
Ssr1-203ENSMUST00000225246 Sptbn4E9PX29 2561 aa10.12□□□□□ -0.79
Ssr1-203ENSMUST00000225246 Map1bP14873 2464 aaKnown RBP10.12□□□□□ -0.79
Ssr1-203ENSMUST00000225246 Esp3J3QN49 87 aa10.12□□□□□ -0.79
Ssr1-203ENSMUST00000225246 P01725 110 aa10.12□□□□□ -0.79
Ssr1-203ENSMUST00000225246 P06330 118 aa10.12□□□□□ -0.79
Ssr1-203ENSMUST00000225246 Gpx1P11352 201 aa10.12□□□□□ -0.79
Ssr1-203ENSMUST00000225246 Fgf6P21658 208 aa10.12□□□□□ -0.79
Ssr1-203ENSMUST00000225246 Hif1anQ8BLR9 349 aa10.12□□□□□ -0.79
Ssr1-203ENSMUST00000225246 A130051J06RikQ8CAU1 227 aa10.12□□□□□ -0.79
Ssr1-203ENSMUST00000225246 NpbQ8K4P1 119 aa10.12□□□□□ -0.79
Ssr1-203ENSMUST00000225246 Olfr976Q8VF15 326 aa10.12□□□□□ -0.79
Ssr1-203ENSMUST00000225246 Erg28Q9ERY9 140 aa10.12□□□□□ -0.79
Ssr1-203ENSMUST00000225246 Trav19A0A0B4J1K4 119 aa10.11□□□□□ -0.79
Ssr1-203ENSMUST00000225246 Hbb-bsA8DUK4 147 aa10.11□□□□□ -0.79
Ssr1-203ENSMUST00000225246 P01801 115 aa10.11□□□□□ -0.79
Ssr1-203ENSMUST00000225246 Hbb-b1P02088 147 aa10.11□□□□□ -0.79
Ssr1-203ENSMUST00000225246 Tcl1b4P56844 120 aa10.11□□□□□ -0.79
Ssr1-203ENSMUST00000225246 Olfr1209Q3SXJ3 310 aa10.11□□□□□ -0.79
Ssr1-203ENSMUST00000225246 RhohQ9D3G9 191 aa10.11□□□□□ -0.79
Ssr1-203ENSMUST00000225246 1700056E22RikF7CNM6 234 aa10.1□□□□□ -0.79
Ssr1-203ENSMUST00000225246 SbpP15501 199 aa10.1□□□□□ -0.79
Ssr1-203ENSMUST00000225246 Cd24P24807 76 aa10.1□□□□□ -0.79
Ssr1-203ENSMUST00000225246 Tal2Q62282 108 aa10.1□□□□□ -0.79
Ssr1-203ENSMUST00000225246 Odf3l1Q810P2 275 aa10.1□□□□□ -0.79
Ssr1-203ENSMUST00000225246 Aqp6Q8C4A0 293 aa10.1□□□□□ -0.79
Ssr1-203ENSMUST00000225246 Gpx7Q99LJ6 186 aa10.1□□□□□ -0.79
Ssr1-203ENSMUST00000225246 Dnajb12Q9QYI4 376 aaKnown RBP10.1□□□□□ -0.79
Ssr1-203ENSMUST00000225246 Npc2Q9Z0J0 149 aa10.1□□□□□ -0.79
Ssr1-203ENSMUST00000225246 P06334 169 aa10.1□□□□□ -0.79
Ssr1-203ENSMUST00000225246 F930015N05RikQ8C3A3 210 aa10.1□□□□□ -0.79
Ssr1-203ENSMUST00000225246 Parm1Q923D3 296 aa10.1□□□□□ -0.79
Ssr1-203ENSMUST00000225246 Mrpl16Q99N93 251 aa10.1□□□□□ -0.79
Ssr1-203ENSMUST00000225246 Map1aQ9QYR6 2776 aa10.1□□□□□ -0.79
Ssr1-203ENSMUST00000225246 AcacbE9Q4Z2 2448 aa10.09□□□□□ -0.79
Ssr1-203ENSMUST00000225246 Gm9242J3QNY1 357 aa10.09□□□□□ -0.79
Retrieved 100 of 22,080 RNA–protein pairs in 119.5 ms