RNA–Protein interactions for RNA: ENSMUST00000089332.4

Col8a1-201, Transcript of Collagen alpha-1(VIII) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col8a1, Length 5,108 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1-201ENSMUST00000089332 Prr3Q811B5 190 aaKnown RBP9.69□□□□□ -0.86
Col8a1-201ENSMUST00000089332 ApomQ9Z1R3 190 aa9.69□□□□□ -0.86
Col8a1-201ENSMUST00000089332 Arfgef3Q3UGY8 2170 aa9.69□□□□□ -0.86
Col8a1-201ENSMUST00000089332 Gm45785A0A1B0GT05 94 aa9.69□□□□□ -0.86
Col8a1-201ENSMUST00000089332 P01787 123 aa9.69□□□□□ -0.86
Col8a1-201ENSMUST00000089332 Edn1P22387 202 aa9.69□□□□□ -0.86
Col8a1-201ENSMUST00000089332 Prok1Q14A28 105 aa9.69□□□□□ -0.86
Col8a1-201ENSMUST00000089332 Defa23Q5G866 93 aa9.69□□□□□ -0.86
Col8a1-201ENSMUST00000089332 Fam216bQ8CC14 138 aa9.69□□□□□ -0.86
Col8a1-201ENSMUST00000089332 Ssbp1Q9CYR0 152 aaKnown RBP9.69□□□□□ -0.86
Col8a1-201ENSMUST00000089332 Cend1Q9JKC6 149 aa9.69□□□□□ -0.86
Col8a1-201ENSMUST00000089332 Fhl3Q9R059 289 aa9.69□□□□□ -0.86
Col8a1-201ENSMUST00000089332 Defa4P28311 92 aa9.68□□□□□ -0.86
Col8a1-201ENSMUST00000089332 H2al1nQ497L1 109 aa9.68□□□□□ -0.86
Col8a1-201ENSMUST00000089332 Ube2cQ9D1C1 179 aa9.68□□□□□ -0.86
Col8a1-201ENSMUST00000089332 Dopey1Q8BL99 2399 aa9.68□□□□□ -0.86
Col8a1-201ENSMUST00000089332 Hbb-bsA8DUK4 147 aa9.68□□□□□ -0.86
Col8a1-201ENSMUST00000089332 Eid2bE9Q2Y0 151 aa9.68□□□□□ -0.86
Col8a1-201ENSMUST00000089332 Hbb-b1P02088 147 aa9.68□□□□□ -0.86
Col8a1-201ENSMUST00000089332 Igkv8-24A0A140T8P5 121 aa9.68□□□□□ -0.86
Col8a1-201ENSMUST00000089332 Lgals4Q8K419 326 aa9.68□□□□□ -0.86
Col8a1-201ENSMUST00000089332 Med13lQ6JPI3 2207 aa9.68□□□□□ -0.86
Col8a1-201ENSMUST00000089332 Gm29289A0A087WPY7 166 aa9.68□□□□□ -0.86
Col8a1-201ENSMUST00000089332 LitafQ9JLJ0 161 aa9.68□□□□□ -0.86
Col8a1-201ENSMUST00000089332 Alms1Q8K4E0 3251 aa9.67□□□□□ -0.86
Col8a1-201ENSMUST00000089332 Smim10l1A0A087WNQ7 89 aa9.67□□□□□ -0.86
Col8a1-201ENSMUST00000089332 Vmn1r197Q8R265 298 aa9.67□□□□□ -0.86
Col8a1-201ENSMUST00000089332 Mrpl32Q9DCI9 187 aaKnown RBP9.67□□□□□ -0.86
Col8a1-201ENSMUST00000089332 Znf664Q4VA44 261 aa9.67□□□□□ -0.86
Col8a1-201ENSMUST00000089332 Msrb3Q8BU85 253 aa9.67□□□□□ -0.86
Col8a1-201ENSMUST00000089332 Tm4sf20Q9CQY8 226 aa9.67□□□□□ -0.86
Col8a1-201ENSMUST00000089332 Fancd2osQ9D4K4 178 aa9.67□□□□□ -0.86
Col8a1-201ENSMUST00000089332 MalO09198 153 aa9.67□□□□□ -0.86
Col8a1-201ENSMUST00000089332 Chac1Q8R3J5 223 aa9.67□□□□□ -0.86
Col8a1-201ENSMUST00000089332 FancmQ8BGE5 2021 aa9.67□□□□□ -0.86
Col8a1-201ENSMUST00000089332 Inafm1E9PV59 130 aa9.67□□□□□ -0.86
Col8a1-201ENSMUST00000089332 Zfyve26Q5DU37 2529 aa9.66□□□□□ -0.86
Col8a1-201ENSMUST00000089332 Znf787Q8BIF9 381 aa9.66□□□□□ -0.86
Col8a1-201ENSMUST00000089332 Gm4064A0A087WR82 380 aa9.66□□□□□ -0.86
Col8a1-201ENSMUST00000089332 Gm10352B2RWR6 380 aa9.66□□□□□ -0.86
Col8a1-201ENSMUST00000089332 Gm21693J3QK27 380 aa9.66□□□□□ -0.86
Col8a1-201ENSMUST00000089332 Rbmy1a1O35698 380 aa9.66□□□□□ -0.86
Col8a1-201ENSMUST00000089332 P04945 108 aa9.66□□□□□ -0.86
Col8a1-201ENSMUST00000089332 P06330 118 aa9.66□□□□□ -0.86
Col8a1-201ENSMUST00000089332 Gm5294J3QP53 216 aa9.66□□□□□ -0.86
Col8a1-201ENSMUST00000089332 P03980 138 aa9.66□□□□□ -0.86
Col8a1-201ENSMUST00000089332 Gpx1P11352 201 aa9.66□□□□□ -0.86
Col8a1-201ENSMUST00000089332 Gm9747Q810H1 104 aa9.66□□□□□ -0.86
Col8a1-201ENSMUST00000089332 Igkv8-34A0A0G2JDU0 121 aa9.66□□□□□ -0.86
Col8a1-201ENSMUST00000089332 Foxi3E0CZH3 425 aa9.66□□□□□ -0.86
Col8a1-201ENSMUST00000089332 Hist2h2beQ64524 126 aa9.66□□□□□ -0.86
Col8a1-201ENSMUST00000089332 Olfr984Q8VFN1 314 aa9.66□□□□□ -0.86
Col8a1-201ENSMUST00000089332 8030423J24RikQ9CX45 142 aa9.66□□□□□ -0.86
Col8a1-201ENSMUST00000089332 Ssbp2Q9CYZ8 361 aa9.66□□□□□ -0.86
Col8a1-201ENSMUST00000089332 Igkv3-9A0A140T8P4 119 aa9.65□□□□□ -0.86
Col8a1-201ENSMUST00000089332 Wisp3D3Z5L9 354 aa9.65□□□□□ -0.86
Col8a1-201ENSMUST00000089332 P01811 117 aa9.65□□□□□ -0.86
Col8a1-201ENSMUST00000089332 Id3P41133 119 aa9.65□□□□□ -0.86
Col8a1-201ENSMUST00000089332 Gm815Q3UWS2 115 aa9.65□□□□□ -0.86
Col8a1-201ENSMUST00000089332 Trav7d-3Q5R1I1 112 aa9.65□□□□□ -0.86
Col8a1-201ENSMUST00000089332 Rif1Q6PR54 2419 aaKnown RBP9.65□□□□□ -0.86
Col8a1-201ENSMUST00000089332 Rai1Q61818 1889 aa9.65□□□□□ -0.86
Col8a1-201ENSMUST00000089332 Gm10188Q3V432 135 aa9.65□□□□□ -0.86
Col8a1-201ENSMUST00000089332 Dpm2Q9Z324 84 aa9.65□□□□□ -0.86
Col8a1-201ENSMUST00000089332 SrcapA0A087WQ44 3271 aa9.65□□□□□ -0.86
Col8a1-201ENSMUST00000089332 Anapc1P53995 1944 aaKnown RBP9.65□□□□□ -0.86
Col8a1-201ENSMUST00000089332 Gm16686Q3UMN9 131 aa9.65□□□□□ -0.86
Col8a1-201ENSMUST00000089332 March3Q8BRX9 218 aa9.65□□□□□ -0.86
Col8a1-201ENSMUST00000089332 Timm10bQ9WV96 100 aa9.65□□□□□ -0.86
Col8a1-201ENSMUST00000089332 P01738 130 aa9.65□□□□□ -0.87
Col8a1-201ENSMUST00000089332 Gm9961Q8BNV2 113 aa9.65□□□□□ -0.87
Col8a1-201ENSMUST00000089332 Trip12G5E870 2025 aaKnown RBP9.64□□□□□ -0.87
Col8a1-201ENSMUST00000089332 LbhQ9CX60 105 aa9.64□□□□□ -0.87
Col8a1-201ENSMUST00000089332 Ankrd39Q9D2X0 183 aa9.64□□□□□ -0.87
Col8a1-201ENSMUST00000089332 Supt4h1bQ9Z199 117 aa9.64□□□□□ -0.87
Col8a1-201ENSMUST00000089332 Gm29423A0A087WRM1 55 aa9.64□□□□□ -0.87
Col8a1-201ENSMUST00000089332 Pxt1Q8K459 51 aa9.64□□□□□ -0.87
Col8a1-201ENSMUST00000089332 Znhit3Q9CQK1 151 aa9.64□□□□□ -0.87
Col8a1-201ENSMUST00000089332 Ccl24Q9JKC0 119 aa9.64□□□□□ -0.87
Col8a1-201ENSMUST00000089332 Gm5089A1L3C8 106 aa9.64□□□□□ -0.87
Col8a1-201ENSMUST00000089332 Samd13D3YUG0 102 aa9.64□□□□□ -0.87
Col8a1-201ENSMUST00000089332 Mbd6Q3TY92 1003 aa9.64□□□□□ -0.87
Col8a1-201ENSMUST00000089332 Klhdc3Q8VEM9 382 aa9.64□□□□□ -0.87
Col8a1-201ENSMUST00000089332 Mapk1ip1Q9D7G9 263 aa9.64□□□□□ -0.87
Col8a1-201ENSMUST00000089332 Spg11Q3UHA3 2430 aa9.63□□□□□ -0.87
Col8a1-201ENSMUST00000089332 Gm20517G3UVU6 152 aa9.63□□□□□ -0.87
Col8a1-201ENSMUST00000089332 Reg3gO09049 174 aa9.63□□□□□ -0.87
Col8a1-201ENSMUST00000089332 Defa20Q45VN2 95 aa9.63□□□□□ -0.87
Col8a1-201ENSMUST00000089332 Zc2hc1aQ8BJH1 324 aa9.63□□□□□ -0.87
Col8a1-201ENSMUST00000089332 Notch3Q61982 2318 aa9.63□□□□□ -0.87
Col8a1-201ENSMUST00000089332 Ighv8-4A0A0A6YW26 117 aa9.63□□□□□ -0.87
Col8a1-201ENSMUST00000089332 P01792 123 aa9.63□□□□□ -0.87
Col8a1-201ENSMUST00000089332 9430097D07RikQ8BS47 195 aa9.63□□□□□ -0.87
Col8a1-201ENSMUST00000089332 Sdk2Q6V4S5 2176 aa9.63□□□□□ -0.87
Col8a1-201ENSMUST00000089332 Igkv4-62A0A0G2JDW9 117 aa9.63□□□□□ -0.87
Col8a1-201ENSMUST00000089332 Synj2bpQ9D6K5 145 aa9.63□□□□□ -0.87
Col8a1-201ENSMUST00000089332 Ighv1-74A0A0G2JGK2 117 aa9.62□□□□□ -0.87
Col8a1-201ENSMUST00000089332 Gm21994F6T2D2 329 aa9.62□□□□□ -0.87
Col8a1-201ENSMUST00000089332 Tmem210Q9D2F0 147 aa9.62□□□□□ -0.87
Col8a1-201ENSMUST00000089332 VsirQ9D659 308 aa9.62□□□□□ -0.87
Retrieved 100 of 22,080 RNA–protein pairs in 69.6 ms