RNA–Protein interactions for RNA: ENSMUST00000027988.7

Ccdc3-201, Transcript of Coiled-coil domain-containing protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc3, Length 2,670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3-201ENSMUST00000027988 Trdv2-1A0A0G2JGB9 116 aa14.17□□□□□ -0.14
Ccdc3-201ENSMUST00000027988 Gm17727E9Q4V7 109 aa14.17□□□□□ -0.14
Ccdc3-201ENSMUST00000027988 Sub1P11031 127 aaKnown RBP14.17□□□□□ -0.14
Ccdc3-201ENSMUST00000027988 Nbl1Q61477 178 aa14.17□□□□□ -0.14
Ccdc3-201ENSMUST00000027988 Prima1Q810F0 153 aa14.17□□□□□ -0.14
Ccdc3-201ENSMUST00000027988 Rnf24Q8BGI1 148 aa14.17□□□□□ -0.14
Ccdc3-201ENSMUST00000027988 Vps25Q9CQ80 176 aa14.17□□□□□ -0.14
Ccdc3-201ENSMUST00000027988 Q9CX25 107 aa14.17□□□□□ -0.14
Ccdc3-201ENSMUST00000027988 Tmem89Q9DA04 169 aa14.17□□□□□ -0.14
Ccdc3-201ENSMUST00000027988 Pgpep1lQ9CWB5 130 aa14.17□□□□□ -0.14
Ccdc3-201ENSMUST00000027988 ManfQ9CXI5 179 aaKnown RBP14.17□□□□□ -0.14
Ccdc3-201ENSMUST00000027988 Dkk2Q9QYZ8 259 aa14.17□□□□□ -0.14
Ccdc3-201ENSMUST00000027988 Ighv2-6A0A075B6A7 116 aa14.16□□□□□ -0.14
Ccdc3-201ENSMUST00000027988 Ceacam15A0A0B4J1L0 234 aa14.16□□□□□ -0.14
Ccdc3-201ENSMUST00000027988 Igkv4-81A0A0G2JEY5 119 aa14.16□□□□□ -0.14
Ccdc3-201ENSMUST00000027988 Sh3bgrl2Q8BG73 107 aa14.16□□□□□ -0.14
Ccdc3-201ENSMUST00000027988 Bub3Q9WVA3 326 aa14.16□□□□□ -0.14
Ccdc3-201ENSMUST00000027988 Defa6P50704 93 aa14.16□□□□□ -0.14
Ccdc3-201ENSMUST00000027988 Tspo2Q9CRZ8 162 aa14.16□□□□□ -0.14
Ccdc3-201ENSMUST00000027988 P01725 110 aa14.15□□□□□ -0.14
Ccdc3-201ENSMUST00000027988 NpsP0C0P8 89 aa14.15□□□□□ -0.14
Ccdc3-201ENSMUST00000027988 Igkv4-59A0A0B4J1I8 117 aa14.15□□□□□ -0.14
Ccdc3-201ENSMUST00000027988 Gm10036E9PYL9 178 aaKnown RBP14.15□□□□□ -0.14
Ccdc3-201ENSMUST00000027988 Defa30E9QPZ2 93 aa14.15□□□□□ -0.14
Ccdc3-201ENSMUST00000027988 Defb33Q30KN3 62 aa14.15□□□□□ -0.14
Ccdc3-201ENSMUST00000027988 Gm5941Q497P9 117 aa14.15□□□□□ -0.14
Ccdc3-201ENSMUST00000027988 Gm6040Q4QY32 63 aa14.15□□□□□ -0.14
Ccdc3-201ENSMUST00000027988 Ang2Q64438 145 aa14.15□□□□□ -0.14
Ccdc3-201ENSMUST00000027988 ApomQ9Z1R3 190 aa14.15□□□□□ -0.14
Ccdc3-201ENSMUST00000027988 Gm45521A0A1B0GRK0 198 aa14.14□□□□□ -0.15
Ccdc3-201ENSMUST00000027988 Ins1P01325 108 aa14.14□□□□□ -0.15
Ccdc3-201ENSMUST00000027988 Cox8bP48772 70 aa14.14□□□□□ -0.15
Ccdc3-201ENSMUST00000027988 Olfr553Q7TRS6 326 aa14.14□□□□□ -0.15
Ccdc3-201ENSMUST00000027988 4930474N05RikQ8BVR5 218 aa14.14□□□□□ -0.15
Ccdc3-201ENSMUST00000027988 D630044L22RikQ8C701 164 aa14.14□□□□□ -0.15
Ccdc3-201ENSMUST00000027988 Gm10118Q8C8J5 116 aa14.14□□□□□ -0.15
Ccdc3-201ENSMUST00000027988 Malsu1Q9CWV0 228 aa14.14□□□□□ -0.15
Ccdc3-201ENSMUST00000027988 1700056E22RikF7CNM6 234 aa14.13□□□□□ -0.15
Ccdc3-201ENSMUST00000027988 Prrx2Q06348 247 aa14.13□□□□□ -0.15
Ccdc3-201ENSMUST00000027988 Zfp493E9Q1L8 384 aa14.13□□□□□ -0.15
Ccdc3-201ENSMUST00000027988 Ly6lH3BJG9 140 aa14.13□□□□□ -0.15
Ccdc3-201ENSMUST00000027988 Gm26727M0QWT1 121 aa14.13□□□□□ -0.15
Ccdc3-201ENSMUST00000027988 Q3UNZ8 350 aa14.13□□□□□ -0.15
Ccdc3-201ENSMUST00000027988 Olfr365Q8VFT2 312 aa14.13□□□□□ -0.15
Ccdc3-201ENSMUST00000027988 PpdpfQ9CR37 115 aa14.13□□□□□ -0.15
Ccdc3-201ENSMUST00000027988 Gm5294J3QP53 216 aa14.12□□□□□ -0.15
Ccdc3-201ENSMUST00000027988 Gtsf1lQ9CWD0 151 aa14.12□□□□□ -0.15
Ccdc3-201ENSMUST00000027988 Rabac1Q9Z0S9 185 aa14.12□□□□□ -0.15
Ccdc3-201ENSMUST00000027988 Edn3P48299 214 aa14.12□□□□□ -0.15
Ccdc3-201ENSMUST00000027988 Aqp6Q8C4A0 293 aa14.12□□□□□ -0.15
Ccdc3-201ENSMUST00000027988 MturnQ8CGA4 131 aa14.12□□□□□ -0.15
Ccdc3-201ENSMUST00000027988 Ubtd1Q91WB7 227 aa14.12□□□□□ -0.15
Ccdc3-201ENSMUST00000027988 Ighv3-1A0A075B5S6 116 aa14.11□□□□□ -0.15
Ccdc3-201ENSMUST00000027988 Msrb2Q78J03 175 aa14.11□□□□□ -0.15
Ccdc3-201ENSMUST00000027988 Gm45213A0A0U1RNZ6 101 aa14.11□□□□□ -0.15
Ccdc3-201ENSMUST00000027988 Gm10604Q3V0X7 143 aa14.11□□□□□ -0.15
Ccdc3-201ENSMUST00000027988 Ndufa4l2Q4FZG9 87 aa14.11□□□□□ -0.15
Ccdc3-201ENSMUST00000027988 G0s2Q61585 103 aa14.11□□□□□ -0.15
Ccdc3-201ENSMUST00000027988 Sdk1Q3UH53 2193 aa14.11□□□□□ -0.15
Ccdc3-201ENSMUST00000027988 Prrc2aQ7TSC1 2158 aaKnown RBP14.11□□□□□ -0.15
Ccdc3-201ENSMUST00000027988 Fam208bQ5DTT3 2382 aa14.1□□□□□ -0.15
Ccdc3-201ENSMUST00000027988 Pkd1l2Q7TN88 2461 aa14.1□□□□□ -0.15
Ccdc3-201ENSMUST00000027988 Ttc28Q80XJ3 2450 aa14.1□□□□□ -0.15
Ccdc3-201ENSMUST00000027988 Ncor2Q9WU42 2472 aaKnown RBP14.1□□□□□ -0.15
Ccdc3-201ENSMUST00000027988 Ly6g5bQ8K1T4 194 aa14.1□□□□□ -0.15
Ccdc3-201ENSMUST00000027988 Gnb1lQ9EQ15 326 aa14.1□□□□□ -0.15
Ccdc3-201ENSMUST00000027988 Mfge8P21956 463 aaKnown RBP14.1□□□□□ -0.15
Ccdc3-201ENSMUST00000027988 AW146154Q3TPQ7 468 aa14.1□□□□□ -0.15
Ccdc3-201ENSMUST00000027988 Vsig8Q6P3A4 417 aa14.1□□□□□ -0.15
Ccdc3-201ENSMUST00000027988 Obox8V9GWY9 217 aa14.1□□□□□ -0.15
Ccdc3-201ENSMUST00000027988 Tmem141A2AJB2 108 aa14.09□□□□□ -0.15
Ccdc3-201ENSMUST00000027988 Foxc2Q61850 494 aa14.09□□□□□ -0.15
Ccdc3-201ENSMUST00000027988 Olfr1437Q7TQR7 312 aa14.09□□□□□ -0.15
Ccdc3-201ENSMUST00000027988 Odf3l1Q810P2 275 aa14.09□□□□□ -0.15
Ccdc3-201ENSMUST00000027988 Gm20517G3UVU6 152 aa14.09□□□□□ -0.15
Ccdc3-201ENSMUST00000027988 7420426K07RikQ3UX66 186 aa14.09□□□□□ -0.15
Ccdc3-201ENSMUST00000027988 Tmem11Q8BK08 190 aa14.09□□□□□ -0.15
Ccdc3-201ENSMUST00000027988 Trav14-2A0A075B694 121 aa14.08□□□□□ -0.15
Ccdc3-201ENSMUST00000027988 A130051J06RikQ8CAU1 227 aa14.08□□□□□ -0.15
Ccdc3-201ENSMUST00000027988 OtoglF7A4A7 2325 aa14.08□□□□□ -0.16
Ccdc3-201ENSMUST00000027988 Itgb1bp1O35671 200 aa14.08□□□□□ -0.16
Ccdc3-201ENSMUST00000027988 Lmo4P61969 165 aa14.08□□□□□ -0.16
Ccdc3-201ENSMUST00000027988 Olfr1209Q3SXJ3 310 aa14.08□□□□□ -0.16
Ccdc3-201ENSMUST00000027988 Ube2e1P52482 193 aa14.08□□□□□ -0.16
Ccdc3-201ENSMUST00000027988 CnfnQ6PCW6 111 aa14.08□□□□□ -0.16
Ccdc3-201ENSMUST00000027988 Mrpl20Q9CQL4 149 aa14.08□□□□□ -0.16
Ccdc3-201ENSMUST00000027988 Dusp14Q9JLY7 198 aa14.08□□□□□ -0.16
Ccdc3-201ENSMUST00000027988 Thy1P01831 162 aa14.07□□□□□ -0.16
Ccdc3-201ENSMUST00000027988 Lelp1Q9DAE3 120 aa14.07□□□□□ -0.16
Ccdc3-201ENSMUST00000027988 CtrlQ9ER05 264 aa14.07□□□□□ -0.16
Ccdc3-201ENSMUST00000027988 Dido1Q8C9B9 2256 aaKnown RBP14.07□□□□□ -0.16
Ccdc3-201ENSMUST00000027988 Sertad4A7DTG3 377 aa14.07□□□□□ -0.16
Ccdc3-201ENSMUST00000027988 Ccdc71lE9Q4T4 218 aa14.07□□□□□ -0.16
Ccdc3-201ENSMUST00000027988 Vsig4F6TUL9 280 aa14.07□□□□□ -0.16
Ccdc3-201ENSMUST00000027988 Smad7O35253 426 aa14.07□□□□□ -0.16
Ccdc3-201ENSMUST00000027988 P01801 115 aa14.07□□□□□ -0.16
Ccdc3-201ENSMUST00000027988 Defa9P50707 93 aa14.07□□□□□ -0.16
Ccdc3-201ENSMUST00000027988 Rps20P60867 119 aaKnown RBP14.07□□□□□ -0.16
Ccdc3-201ENSMUST00000027988 Gm5150Q1AN92 299 aa14.07□□□□□ -0.16
Ccdc3-201ENSMUST00000027988 Gm12888Q3UW77 119 aa14.07□□□□□ -0.16
Retrieved 100 of 22,080 RNA–protein pairs in 83.4 ms