RNA–Protein interactions for RNA: ENST00000641513.1

PHGDH-219, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-219ENST00000641513 A0A087WSZ3 146 aa5.28□□□□□ -1.56
PHGDH-219ENST00000641513 H3BPC8 53 aa5.28□□□□□ -1.56
PHGDH-219ENST00000641513 OXTP01178 125 aa5.28□□□□□ -1.56
PHGDH-219ENST00000641513 DYNC1H1Q14204 4646 aaKnown RBP5.28□□□□□ -1.56
PHGDH-219ENST00000641513 A8MWP4 228 aa5.27□□□□□ -1.57
PHGDH-219ENST00000641513 LINC00472Q9H8W2 130 aa5.27□□□□□ -1.57
PHGDH-219ENST00000641513 LRP1BQ9NZR2 4599 aa5.27□□□□□ -1.57
PHGDH-219ENST00000641513 SMIM26A0A096LP01 95 aa5.26□□□□□ -1.57
PHGDH-219ENST00000641513 KRTAP29-1A8MX34 341 aaPredicted RBP5.26□□□□□ -1.57
PHGDH-219ENST00000641513 NDUFB1O75438 58 aa5.26□□□□□ -1.57
PHGDH-219ENST00000641513 SPINK6Q6UWN8 80 aa5.26□□□□□ -1.57
PHGDH-219ENST00000641513 PRR15Q8IV56 129 aa5.26□□□□□ -1.57
PHGDH-219ENST00000641513 ABCA13Q86UQ4 5058 aa5.25□□□□□ -1.57
PHGDH-219ENST00000641513 FAM229BQ4G0N7 80 aa5.25□□□□□ -1.57
PHGDH-219ENST00000641513 FAM229AH3BQW9 127 aa5.24□□□□□ -1.57
PHGDH-219ENST00000641513 PLA2G1BP04054 148 aaKnown RBP5.24□□□□□ -1.57
PHGDH-219ENST00000641513 Q5XG85 94 aa5.24□□□□□ -1.57
PHGDH-219ENST00000641513 A0A087X002 238 aa5.23□□□□□ -1.57
PHGDH-219ENST00000641513 SSBP3-AS1Q7Z2R9 100 aa5.23□□□□□ -1.57
PHGDH-219ENST00000641513 MP68P56378 58 aa5.22□□□□□ -1.57
PHGDH-219ENST00000641513 DEFB116Q30KQ4 102 aa5.22□□□□□ -1.57
PHGDH-219ENST00000641513 CYP4F30PQ9H0H9 118 aa5.22□□□□□ -1.57
PHGDH-219ENST00000641513 APOBP04114 4563 aaKnown RBP5.22□□□□□ -1.57
PHGDH-219ENST00000641513 CDK2AP2O75956 126 aa5.21□□□□□ -1.58
PHGDH-219ENST00000641513 KRTAP1-4P0C5Y4 121 aa5.21□□□□□ -1.58
PHGDH-219ENST00000641513 ASB16-AS1Q495Z4 193 aa5.21□□□□□ -1.58
PHGDH-219ENST00000641513 KRTAP13-2Q52LG2 175 aa5.21□□□□□ -1.58
PHGDH-219ENST00000641513 KIAA1109Q2LD37 5005 aa5.2□□□□□ -1.58
PHGDH-219ENST00000641513 hDV103S1A0JD37 113 aa5.2□□□□□ -1.58
PHGDH-219ENST00000641513 LCE3BQ5TA77 95 aa5.2□□□□□ -1.58
PHGDH-219ENST00000641513 CASC2Q6XLA1 102 aa5.2□□□□□ -1.58
PHGDH-219ENST00000641513 TYMSOSQ8TAI1 123 aa5.2□□□□□ -1.58
PHGDH-219ENST00000641513 VPS13BQ7Z7G8 4022 aa5.19□□□□□ -1.58
PHGDH-219ENST00000641513 Q5VSD8 79 aa5.19□□□□□ -1.58
PHGDH-219ENST00000641513 SPANXA2-OT1Q8N9U9 137 aa5.19□□□□□ -1.58
PHGDH-219ENST00000641513 TP53AIP1Q9HCN2 124 aa5.19□□□□□ -1.58
PHGDH-219ENST00000641513 MMP24-AS1A0A0U1RRL7 71 aa5.18□□□□□ -1.58
PHGDH-219ENST00000641513 KRTAP10-4P60372 401 aaPredicted RBP5.18□□□□□ -1.58
PHGDH-219ENST00000641513 CD164Q04900 197 aa5.18□□□□□ -1.58
PHGDH-219ENST00000641513 PRR26Q8N8Z3 221 aa5.18□□□□□ -1.58
PHGDH-219ENST00000641513 Q96NJ1 140 aa5.18□□□□□ -1.58
PHGDH-219ENST00000641513 TRAV22A0A0B4J277 110 aa5.17□□□□□ -1.58
PHGDH-219ENST00000641513 WFDC13Q8IUB5 93 aa5.17□□□□□ -1.58
PHGDH-219ENST00000641513 HERC1Q15751 4861 aa5.16□□□□□ -1.58
PHGDH-219ENST00000641513 FP248Q71RG6 208 aaPredicted RBP5.16□□□□□ -1.58
PHGDH-219ENST00000641513 H0Y9P7 68 aa5.14□□□□□ -1.59
PHGDH-219ENST00000641513 A0A1B0GVX0 72 aa5.13□□□□□ -1.59
PHGDH-219ENST00000641513 C4orf26Q17RF5 130 aa5.13□□□□□ -1.59
PHGDH-219ENST00000641513 LINC00304Q8N9R0 145 aa5.13□□□□□ -1.59
PHGDH-219ENST00000641513 KRTAP4-12Q9BQ66 201 aa5.13□□□□□ -1.59
PHGDH-219ENST00000641513 LIMD2Q9BT23 127 aa5.13□□□□□ -1.59
PHGDH-219ENST00000641513 C8orf17Q9NRJ1 99 aa5.12□□□□□ -1.59
PHGDH-219ENST00000641513 FAT1Q14517 4588 aa5.12□□□□□ -1.59
PHGDH-219ENST00000641513 LINC00208Q96KT6 92 aa5.11□□□□□ -1.59
PHGDH-219ENST00000641513 KRTAP9-9Q9BYP9 154 aa5.11□□□□□ -1.59
PHGDH-219ENST00000641513 KRTAP9-4Q9BYQ2 154 aa5.11□□□□□ -1.59
PHGDH-219ENST00000641513 PKHD1L1Q86WI1 4243 aa5.11□□□□□ -1.59
PHGDH-219ENST00000641513 SPINK1P00995 79 aa5.1□□□□□ -1.59
PHGDH-219ENST00000641513 Q1T7F1 81 aa5.1□□□□□ -1.59
PHGDH-219ENST00000641513 SPAG11AQ6PDA7 123 aa5.1□□□□□ -1.59
PHGDH-219ENST00000641513 Q8N1X5 172 aa5.1□□□□□ -1.59
PHGDH-219ENST00000641513 C1orf64Q8NEQ6 169 aa5.1□□□□□ -1.59
PHGDH-219ENST00000641513 V9GYY9 64 aa5.1□□□□□ -1.59
PHGDH-219ENST00000641513 HSPG2P98160 4391 aa5.09□□□□□ -1.59
PHGDH-219ENST00000641513 IGHV6-1A0A0B4J1U7 121 aa5.09□□□□□ -1.59
PHGDH-219ENST00000641513 C8orf87E5RJ46 101 aa5.09□□□□□ -1.59
PHGDH-219ENST00000641513 C1orf195Q5TG92 126 aa5.08□□□□□ -1.6
PHGDH-219ENST00000641513 MRPL34Q9BQ48 92 aaKnown RBP5.08□□□□□ -1.6
PHGDH-219ENST00000641513 IGLV7-46A0A075B6I9 117 aa5.06□□□□□ -1.6
PHGDH-219ENST00000641513 KRTAP4-8A0A0G2JLE6 195 aa5.06□□□□□ -1.6
PHGDH-219ENST00000641513 PRO0628Q9UI54 55 aa5.06□□□□□ -1.6
PHGDH-219ENST00000641513 RPS29P62273 56 aaKnown RBP5.04□□□□□ -1.6
PHGDH-219ENST00000641513 LOC101927531A0A1B0GV80 90 aa5.03□□□□□ -1.6
PHGDH-219ENST00000641513 NDUFS5O43920 106 aa5.01□□□□□ -1.61
PHGDH-219ENST00000641513 KRTAP10-8P60410 259 aa5.01□□□□□ -1.61
PHGDH-219ENST00000641513 KRTAP13-3Q3SY46 172 aa5.01□□□□□ -1.61
PHGDH-219ENST00000641513 NOTCH2NLQ7Z3S9 236 aa5.01□□□□□ -1.61
PHGDH-219ENST00000641513 LINC00313P59037 77 aa5□□□□□ -1.61
PHGDH-219ENST00000641513 MPLKIPQ8TAP9 179 aa4.99□□□□□ -1.61
PHGDH-219ENST00000641513 RETNLBQ9BQ08 111 aa4.99□□□□□ -1.61
PHGDH-219ENST00000641513 KRTAP19-1Q8IUB9 90 aa4.98□□□□□ -1.61
PHGDH-219ENST00000641513 KRTAP4-5Q9BYR2 181 aa4.98□□□□□ -1.61
PHGDH-219ENST00000641513 Q8N9P0 234 aaPredicted RBP4.97□□□□□ -1.61
PHGDH-219ENST00000641513 PRR4Q16378 134 aa4.96□□□□□ -1.62
PHGDH-219ENST00000641513 FLG2Q5D862 2391 aaPredicted RBP4.96□□□□□ -1.62
PHGDH-219ENST00000641513 COA5Q86WW8 74 aa4.95□□□□□ -1.62
PHGDH-219ENST00000641513 C9orf92A6NGG3 77 aa4.94□□□□□ -1.62
PHGDH-219ENST00000641513 MT1HL1P0DM35 61 aa4.93□□□□□ -1.62
PHGDH-219ENST00000641513 FAT3Q8TDW7 4589 aa4.93□□□□□ -1.62
PHGDH-219ENST00000641513 LRP1Q07954 4544 aaKnown RBP4.93□□□□□ -1.62
PHGDH-219ENST00000641513 PCOTHQ58A44 107 aa4.92□□□□□ -1.62
PHGDH-219ENST00000641513 BRK1Q8WUW1 75 aa4.92□□□□□ -1.62
PHGDH-219ENST00000641513 KRTAP16-1A8MUX0 517 aa4.91□□□□□ -1.62
PHGDH-219ENST00000641513 Q75L30 129 aa4.91□□□□□ -1.62
PHGDH-219ENST00000641513 LINC01558Q9Y6Z2 57 aa4.91□□□□□ -1.62
PHGDH-219ENST00000641513 TNXBP22105 4242 aa4.91□□□□□ -1.62
PHGDH-219ENST00000641513 Q5W150 140 aa4.9□□□□□ -1.63
PHGDH-219ENST00000641513 KRTAP4-7Q9BYR0 210 aa4.9□□□□□ -1.63
PHGDH-219ENST00000641513 IGKV2-30P06310 120 aa4.89□□□□□ -1.63
PHGDH-219ENST00000641513 HRES1P13985 223 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms