RNA–Protein interactions for RNA: ENST00000637329.1

CLN6-219, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,204 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-219ENST00000637329 Q8N9L7 120 aa8.79□□□□□ -1
CLN6-219ENST00000637329 FAM236AA0A1B0GUQ0 79 aa8.78□□□□□ -1
CLN6-219ENST00000637329 FAM236BA0A1B0GV22 79 aa8.78□□□□□ -1
CLN6-219ENST00000637329 FAT3Q8TDW7 4589 aa8.77□□□□□ -1.01
CLN6-219ENST00000637329 OXTP01178 125 aa8.77□□□□□ -1.01
CLN6-219ENST00000637329 PRR15Q8IV56 129 aa8.77□□□□□ -1.01
CLN6-219ENST00000637329 C1orf195Q5TG92 126 aa8.76□□□□□ -1.01
CLN6-219ENST00000637329 TNXBP22105 4242 aa8.76□□□□□ -1.01
CLN6-219ENST00000637329 A0A1B0GVX0 72 aa8.74□□□□□ -1.01
CLN6-219ENST00000637329 LRP1Q07954 4544 aaKnown RBP8.72□□□□□ -1.01
CLN6-219ENST00000637329 HCG22E2RYF7 251 aa8.72□□□□□ -1.01
CLN6-219ENST00000637329 ATOX1O00244 68 aa8.71□□□□□ -1.02
CLN6-219ENST00000637329 MT1HL1P0DM35 61 aa8.7□□□□□ -1.02
CLN6-219ENST00000637329 MMP24-AS1A0A0U1RRL7 71 aa8.68□□□□□ -1.02
CLN6-219ENST00000637329 C8orf87E5RJ46 101 aa8.68□□□□□ -1.02
CLN6-219ENST00000637329 IGHV6-1A0A0B4J1U7 121 aa8.67□□□□□ -1.02
CLN6-219ENST00000637329 C8orf17Q9NRJ1 99 aa8.66□□□□□ -1.02
CLN6-219ENST00000637329 CASC2Q6XLA1 102 aa8.65□□□□□ -1.02
CLN6-219ENST00000637329 SMIM20Q8N5G0 67 aa8.65□□□□□ -1.02
CLN6-219ENST00000637329 RNF213Q63HN8 5207 aa8.64□□□□□ -1.03
CLN6-219ENST00000637329 hDV103S1A0JD37 113 aa8.62□□□□□ -1.03
CLN6-219ENST00000637329 ANAPC13Q9BS18 74 aa8.62□□□□□ -1.03
CLN6-219ENST00000637329 WFDC13Q8IUB5 93 aa8.61□□□□□ -1.03
CLN6-219ENST00000637329 TMEM254Q8TBM7 123 aa8.61□□□□□ -1.03
CLN6-219ENST00000637329 FP248Q71RG6 208 aaPredicted RBP8.6□□□□□ -1.03
CLN6-219ENST00000637329 LINC00313P59037 77 aa8.58□□□□□ -1.04
CLN6-219ENST00000637329 TRAV7A0A075B6U4 112 aa8.57□□□□□ -1.04
CLN6-219ENST00000637329 SERP2Q8N6R1 65 aa8.56□□□□□ -1.04
CLN6-219ENST00000637329 MRPL34Q9BQ48 92 aaKnown RBP8.56□□□□□ -1.04
CLN6-219ENST00000637329 OCR1Q9BZK8 76 aa8.56□□□□□ -1.04
CLN6-219ENST00000637329 PCP4P48539 62 aa8.55□□□□□ -1.04
CLN6-219ENST00000637329 NOTCH2NLQ7Z3S9 236 aa8.55□□□□□ -1.04
CLN6-219ENST00000637329 RETNLBQ9BQ08 111 aa8.55□□□□□ -1.04
CLN6-219ENST00000637329 KRTAP16-1A8MUX0 517 aa8.51□□□□□ -1.05
CLN6-219ENST00000637329 COX7CP15954 63 aa8.51□□□□□ -1.05
CLN6-219ENST00000637329 TP53AIP1Q9HCN2 124 aa8.51□□□□□ -1.05
CLN6-219ENST00000637329 UQCRQO14949 82 aa8.49□□□□□ -1.05
CLN6-219ENST00000637329 Q8N9P0 234 aaPredicted RBP8.49□□□□□ -1.05
CLN6-219ENST00000637329 LRP2P98164 4655 aa8.48□□□□□ -1.05
CLN6-219ENST00000637329 IGLV7-46A0A075B6I9 117 aa8.45□□□□□ -1.06
CLN6-219ENST00000637329 NDUFS5O43920 106 aa8.45□□□□□ -1.06
CLN6-219ENST00000637329 C5orf47Q569G3 176 aa8.43□□□□□ -1.06
CLN6-219ENST00000637329 TRAV22A0A0B4J277 110 aa8.42□□□□□ -1.06
CLN6-219ENST00000637329 KRTAP9-2Q9BYQ4 174 aa8.42□□□□□ -1.06
CLN6-219ENST00000637329 C9orf92A6NGG3 77 aa8.41□□□□□ -1.06
CLN6-219ENST00000637329 C20orf166-AS1Q96NR2 134 aa8.41□□□□□ -1.06
CLN6-219ENST00000637329 H3BPC8 53 aa8.39□□□□□ -1.07
CLN6-219ENST00000637329 CCDC179H3BU77 68 aa8.39□□□□□ -1.07
CLN6-219ENST00000637329 MP68P56378 58 aa8.39□□□□□ -1.07
CLN6-219ENST00000637329 PRR4Q16378 134 aa8.39□□□□□ -1.07
CLN6-219ENST00000637329 KRTAP13-3Q3SY46 172 aa8.39□□□□□ -1.07
CLN6-219ENST00000637329 A8MUU9 505 aa8.38□□□□□ -1.07
CLN6-219ENST00000637329 H0Y9P7 68 aa8.38□□□□□ -1.07
CLN6-219ENST00000637329 TPRXLQ17RH7 258 aa8.38□□□□□ -1.07
CLN6-219ENST00000637329 KRTAP9-6A0A140TA67 174 aa8.37□□□□□ -1.07
CLN6-219ENST00000637329 KLKP1Q107X0 134 aa8.37□□□□□ -1.07
CLN6-219ENST00000637329 C20orf197Q8N268 126 aa8.37□□□□□ -1.07
CLN6-219ENST00000637329 Q75L30 129 aa8.35□□□□□ -1.07
CLN6-219ENST00000637329 A0A0U1RQV1 116 aa8.34□□□□□ -1.07
CLN6-219ENST00000637329 ZCCHC13Q8WW36 166 aaKnown RBP8.31□□□□□ -1.08
CLN6-219ENST00000637329 NDUFC1O43677 76 aa8.3□□□□□ -1.08
CLN6-219ENST00000637329 XP32Q5T750 250 aa8.3□□□□□ -1.08
CLN6-219ENST00000637329 LOC101927531A0A1B0GV80 90 aa8.29□□□□□ -1.08
CLN6-219ENST00000637329 Q5W150 140 aa8.29□□□□□ -1.08
CLN6-219ENST00000637329 LINC00208Q96KT6 92 aa8.29□□□□□ -1.08
CLN6-219ENST00000637329 C1orf64Q8NEQ6 169 aa8.28□□□□□ -1.08
CLN6-219ENST00000637329 SNURFQ9Y675 71 aa8.28□□□□□ -1.08
CLN6-219ENST00000637329 RPL37P61927 97 aaKnown RBP8.27□□□□□ -1.09
CLN6-219ENST00000637329 CYSTM1Q9H1C7 97 aa8.23□□□□□ -1.09
CLN6-219ENST00000637329 H7BZZ5 65 aa8.21□□□□□ -1.1
CLN6-219ENST00000637329 IGKV2-30P06310 120 aa8.2□□□□□ -1.1
CLN6-219ENST00000637329 ATP11AUNQ6ZP68 121 aa8.2□□□□□ -1.1
CLN6-219ENST00000637329 TMEM258P61165 79 aa8.18□□□□□ -1.1
CLN6-219ENST00000637329 C7orf65Q6ZTY9 151 aa8.18□□□□□ -1.1
CLN6-219ENST00000637329 CYP4F30PQ9H0H9 118 aa8.17□□□□□ -1.1
CLN6-219ENST00000637329 IGKV2D-30A0A075B6S6 120 aa8.13□□□□□ -1.11
CLN6-219ENST00000637329 ATP5EP56381 51 aaPredicted RBP8.13□□□□□ -1.11
CLN6-219ENST00000637329 SPANXA2-OT1Q8N9U9 137 aa8.12□□□□□ -1.11
CLN6-219ENST00000637329 FAM236DA0A1B0GTK5 79 aa8.09□□□□□ -1.11
CLN6-219ENST00000637329 FAM236CP0DP71 79 aa8.09□□□□□ -1.11
CLN6-219ENST00000637329 PCOTHQ58A44 107 aa8.09□□□□□ -1.11
CLN6-219ENST00000637329 FAT4Q6V0I7 4981 aa8.08□□□□□ -1.12
CLN6-219ENST00000637329 LPAP08519 4548 aa8.08□□□□□ -1.12
CLN6-219ENST00000637329 SEC61BP60468 96 aaKnown RBP8.07□□□□□ -1.12
CLN6-219ENST00000637329 SPINK7P58062 85 aa8.06□□□□□ -1.12
CLN6-219ENST00000637329 MUC2Q02817 5179 aa8.03□□□□□ -1.12
CLN6-219ENST00000637329 HRES1P13985 223 aa8.03□□□□□ -1.12
CLN6-219ENST00000637329 MUC17Q685J3 4493 aa7.96□□□□□ -1.14
CLN6-219ENST00000637329 DMAC1Q96GE9 116 aa7.95□□□□□ -1.14
CLN6-219ENST00000637329 A8MUN3 132 aa7.94□□□□□ -1.14
CLN6-219ENST00000637329 LCE2AQ5TA79 106 aaPredicted RBP7.94□□□□□ -1.14
CLN6-219ENST00000637329 C4orf26Q17RF5 130 aa7.91□□□□□ -1.14
CLN6-219ENST00000637329 SERP1Q9Y6X1 66 aa7.91□□□□□ -1.14
CLN6-219ENST00000637329 COX6B2Q6YFQ2 88 aa7.88□□□□□ -1.15
CLN6-219ENST00000637329 ACYP2P14621 99 aa7.87□□□□□ -1.15
CLN6-219ENST00000637329 CRCT1Q9UGL9 99 aa7.87□□□□□ -1.15
CLN6-219ENST00000637329 MPLKIPQ8TAP9 179 aa7.86□□□□□ -1.15
CLN6-219ENST00000637329 FSIP2Q5CZC0 6907 aa7.86□□□□□ -1.15
CLN6-219ENST00000637329 RPS28P62857 69 aaKnown RBP7.85□□□□□ -1.15
CLN6-219ENST00000637329 RBM12B-AS1Q9P1G2 102 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms