RNA–Protein interactions for RNA: ENST00000630482.2

SOX2-OT-256, SOX2 overlapping transcript, human

TSL 5

Gene SOX2-OT, Length 1,012 nt, Biotype sense overlapping.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SOX2-OT-256	ENST00000630482	KRTAP23-1	A1A580	65 aa		6.31	□□□□□ -1.4
SOX2-OT-256	ENST00000630482	PDE6G	P18545	87 aa		6.31	□□□□□ -1.4
SOX2-OT-256	ENST00000630482	VPS25	Q9BRG1	176 aa		6.31	□□□□□ -1.4
SOX2-OT-256	ENST00000630482	TRBV7-7	A0A0K0K1E9	115 aa		6.3	□□□□□ -1.4
SOX2-OT-256	ENST00000630482	CCK	P06307	115 aa		6.3	□□□□□ -1.4
SOX2-OT-256	ENST00000630482	MTURN	Q8N3F0	131 aa		6.3	□□□□□ -1.4
SOX2-OT-256	ENST00000630482	OBSCN-AS1	Q96MR7	158 aa		6.3	□□□□□ -1.4
SOX2-OT-256	ENST00000630482	KRTAP4-8	Q9BYQ9	185 aa		6.3	□□□□□ -1.4
SOX2-OT-256	ENST00000630482	SS18L2	Q9UHA2	77 aa		6.3	□□□□□ -1.4
SOX2-OT-256	ENST00000630482		Q6Q795	121 aa		6.29	□□□□□ -1.4
SOX2-OT-256	ENST00000630482		F8W1H4	67 aa		6.28	□□□□□ -1.4
SOX2-OT-256	ENST00000630482	TRBV7-4	A0A0J9YYF1	115 aa		6.27	□□□□□ -1.41
SOX2-OT-256	ENST00000630482	KRTAP9-1	A8MXZ3	250 aa	Predicted RBP	6.27	□□□□□ -1.41
SOX2-OT-256	ENST00000630482		Q75L30	129 aa		6.26	□□□□□ -1.41
SOX2-OT-256	ENST00000630482		A0A087WSZ3	146 aa		6.25	□□□□□ -1.41
SOX2-OT-256	ENST00000630482		A0A0A0MQY5	61 aa		6.25	□□□□□ -1.41
SOX2-OT-256	ENST00000630482	C14orf132	Q9NPU4	83 aa		6.25	□□□□□ -1.41
SOX2-OT-256	ENST00000630482		A0A1W2PNM2	257 aa		6.24	□□□□□ -1.41
SOX2-OT-256	ENST00000630482	ATP11AUN	Q6ZP68	121 aa		6.24	□□□□□ -1.41
SOX2-OT-256	ENST00000630482	LOC110117498	A0A087WWA1	95 aa		6.23	□□□□□ -1.41
SOX2-OT-256	ENST00000630482		A0A1B0GW54	56 aa		6.23	□□□□□ -1.41
SOX2-OT-256	ENST00000630482		Q6ZQT0	140 aa		6.22	□□□□□ -1.41
SOX2-OT-256	ENST00000630482		Q96NJ1	140 aa		6.22	□□□□□ -1.41
SOX2-OT-256	ENST00000630482	PRO0461	Q9UI25	63 aa		6.2	□□□□□ -1.42
SOX2-OT-256	ENST00000630482		A0A1B0GV90	55 aa		6.19	□□□□□ -1.42
SOX2-OT-256	ENST00000630482	KRTAP9-8	Q9BYQ0	159 aa		6.19	□□□□□ -1.42
SOX2-OT-256	ENST00000630482	NREP	Q16612	68 aa		6.18	□□□□□ -1.42
SOX2-OT-256	ENST00000630482	ETDB	Q3ZM63	59 aa		6.17	□□□□□ -1.42
SOX2-OT-256	ENST00000630482	C20orf166-AS1	Q96NR2	134 aa		6.17	□□□□□ -1.42
SOX2-OT-256	ENST00000630482		A8MUU9	505 aa		6.16	□□□□□ -1.42
SOX2-OT-256	ENST00000630482	IGKV4-1	P06312	121 aa		6.16	□□□□□ -1.42
SOX2-OT-256	ENST00000630482	SIGMAR1	Q99720	223 aa		6.15	□□□□□ -1.42
SOX2-OT-256	ENST00000630482	USH2A	O75445	5202 aa		6.15	□□□□□ -1.43
SOX2-OT-256	ENST00000630482	SSPO	A2VEC9	5147 aa		6.14	□□□□□ -1.43
SOX2-OT-256	ENST00000630482		J3KT08	172 aa		6.14	□□□□□ -1.43
SOX2-OT-256	ENST00000630482	DSCR10	P59022	87 aa		6.14	□□□□□ -1.43
SOX2-OT-256	ENST00000630482	KRTAP9-7	A8MTY7	169 aa		6.13	□□□□□ -1.43
SOX2-OT-256	ENST00000630482	NDUFB1	O75438	58 aa		6.13	□□□□□ -1.43
SOX2-OT-256	ENST00000630482	DEFB116	Q30KQ4	102 aa		6.13	□□□□□ -1.43
SOX2-OT-256	ENST00000630482	KRTAP16-1	A8MUX0	517 aa		6.12	□□□□□ -1.43
SOX2-OT-256	ENST00000630482	UBL5	Q9BZL1	73 aa		6.11	□□□□□ -1.43
SOX2-OT-256	ENST00000630482	LINC00472	Q9H8W2	130 aa		6.11	□□□□□ -1.43
SOX2-OT-256	ENST00000630482	MT2A	P02795	61 aa		6.09	□□□□□ -1.43
SOX2-OT-256	ENST00000630482	LINC00313	P59037	77 aa		6.08	□□□□□ -1.44
SOX2-OT-256	ENST00000630482	IGHV6-1	A0A0B4J1U7	121 aa		6.07	□□□□□ -1.44
SOX2-OT-256	ENST00000630482	BPY2	O14599	106 aa		6.07	□□□□□ -1.44
SOX2-OT-256	ENST00000630482	ACYP1	P07311	99 aa		6.07	□□□□□ -1.44
SOX2-OT-256	ENST00000630482	FAM236D	A0A1B0GTK5	79 aa		6.06	□□□□□ -1.44
SOX2-OT-256	ENST00000630482		J3QR89	54 aa		6.06	□□□□□ -1.44
SOX2-OT-256	ENST00000630482	MT1F	P04733	61 aa		6.06	□□□□□ -1.44
SOX2-OT-256	ENST00000630482	FAM236C	P0DP71	79 aa		6.06	□□□□□ -1.44
SOX2-OT-256	ENST00000630482	NOTCH2NL	Q7Z3S9	236 aa		6.05	□□□□□ -1.44
SOX2-OT-256	ENST00000630482	C8orf87	E5RJ46	101 aa		6.04	□□□□□ -1.44
SOX2-OT-256	ENST00000630482	HRES1	P13985	223 aa		6.04	□□□□□ -1.44
SOX2-OT-256	ENST00000630482		Q6ZVQ6	151 aa		6.04	□□□□□ -1.44
SOX2-OT-256	ENST00000630482	LINC00846	Q9NV44	126 aa		6.04	□□□□□ -1.44
SOX2-OT-256	ENST00000630482		A0A1B0GVX0	72 aa		6.03	□□□□□ -1.44
SOX2-OT-256	ENST00000630482		A8MWP4	228 aa		6.03	□□□□□ -1.44
SOX2-OT-256	ENST00000630482	MPLKIP	Q8TAP9	179 aa		6.02	□□□□□ -1.45
SOX2-OT-256	ENST00000630482	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	6.01	□□□□□ -1.45
SOX2-OT-256	ENST00000630482	KRTAP19-1	Q8IUB9	90 aa		6.01	□□□□□ -1.45
SOX2-OT-256	ENST00000630482	FAM240A	A0A1B0GVK7	77 aa		5.99	□□□□□ -1.45
SOX2-OT-256	ENST00000630482	LCE3B	Q5TA77	95 aa		5.99	□□□□□ -1.45
SOX2-OT-256	ENST00000630482	PRR15	Q8IV56	129 aa		5.99	□□□□□ -1.45
SOX2-OT-256	ENST00000630482	KRTAP9-3	Q9BYQ3	159 aa		5.99	□□□□□ -1.45
SOX2-OT-256	ENST00000630482	IGKV3D-7	A0A0C4DH55	119 aa		5.97	□□□□□ -1.45
SOX2-OT-256	ENST00000630482	KRTAP10-10	P60014	251 aa		5.97	□□□□□ -1.45
SOX2-OT-256	ENST00000630482	RBM12B-AS1	Q9P1G2	102 aa		5.97	□□□□□ -1.45
SOX2-OT-256	ENST00000630482	C8orf17	Q9NRJ1	99 aa		5.96	□□□□□ -1.46
SOX2-OT-256	ENST00000630482	CXCL6	P80162	114 aa		5.95	□□□□□ -1.46
SOX2-OT-256	ENST00000630482		K7EQZ3	153 aa		5.94	□□□□□ -1.46
SOX2-OT-256	ENST00000630482	KRTAP4-8	A0A0G2JLE6	195 aa		5.93	□□□□□ -1.46
SOX2-OT-256	ENST00000630482	hDV103S1	A0JD37	113 aa		5.92	□□□□□ -1.46
SOX2-OT-256	ENST00000630482		K7ERU9	68 aa		5.92	□□□□□ -1.46
SOX2-OT-256	ENST00000630482	NDUFS5	O43920	106 aa		5.92	□□□□□ -1.46
SOX2-OT-256	ENST00000630482	ATP5EP2	Q5VTU8	51 aa		5.91	□□□□□ -1.46
SOX2-OT-256	ENST00000630482	LINC00643	Q86TS7	51 aa		5.91	□□□□□ -1.46
SOX2-OT-256	ENST00000630482		Q8N9L7	120 aa		5.91	□□□□□ -1.46
SOX2-OT-256	ENST00000630482	KRTAP9-9	Q9BYP9	154 aa		5.91	□□□□□ -1.46
SOX2-OT-256	ENST00000630482	KRTAP9-4	Q9BYQ2	154 aa		5.91	□□□□□ -1.46
SOX2-OT-256	ENST00000630482	CASC2	Q6XLA1	102 aa		5.9	□□□□□ -1.46
SOX2-OT-256	ENST00000630482	TMEM254	Q8TBM7	123 aa		5.9	□□□□□ -1.46
SOX2-OT-256	ENST00000630482	MRPL34	Q9BQ48	92 aa	Known RBP	5.9	□□□□□ -1.46
SOX2-OT-256	ENST00000630482	HIST1H4A	P62805	103 aa	Known RBP	5.89	□□□□□ -1.47
SOX2-OT-256	ENST00000630482	WFDC13	Q8IUB5	93 aa		5.89	□□□□□ -1.47
SOX2-OT-256	ENST00000630482	MMP24-AS1	A0A0U1RRL7	71 aa		5.87	□□□□□ -1.47
SOX2-OT-256	ENST00000630482	HCG22	E2RYF7	251 aa		5.87	□□□□□ -1.47
SOX2-OT-256	ENST00000630482	ZCCHC13	Q8WW36	166 aa	Known RBP	5.87	□□□□□ -1.47
SOX2-OT-256	ENST00000630482		Q8N9P0	234 aa	Predicted RBP	5.86	□□□□□ -1.47
SOX2-OT-256	ENST00000630482	KRTAP3-1	Q9BYR8	98 aa		5.86	□□□□□ -1.47
SOX2-OT-256	ENST00000630482	MACF1	Q9UPN3	7388 aa	Known RBP	5.85	□□□□□ -1.47
SOX2-OT-256	ENST00000630482	SPINK7	P58062	85 aa		5.85	□□□□□ -1.47
SOX2-OT-256	ENST00000630482	KRTAP19-6	Q3LI70	58 aa		5.82	□□□□□ -1.48
SOX2-OT-256	ENST00000630482	TP53AIP1	Q9HCN2	124 aa		5.79	□□□□□ -1.48
SOX2-OT-256	ENST00000630482	SYNE2	Q8WXH0	6885 aa	Known RBP	5.78	□□□□□ -1.48
SOX2-OT-256	ENST00000630482	KRTAP4-7	Q9BYR0	210 aa		5.77	□□□□□ -1.49
SOX2-OT-256	ENST00000630482	SCGB1A1	P11684	91 aa		5.76	□□□□□ -1.49
SOX2-OT-256	ENST00000630482		A0A087WVE0	104 aa		5.74	□□□□□ -1.49
SOX2-OT-256	ENST00000630482	KRTAP4-12	Q9BQ66	201 aa		5.74	□□□□□ -1.49
SOX2-OT-256	ENST00000630482	IMUP	Q9GZP8	106 aa		5.74	□□□□□ -1.49

Retrieved 100 of 20,778 RNA–protein pairs in 173.8 ms