RNA–Protein interactions for RNA: ENST00000628124.2

GABRB3-216, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2 BASIC

Gene GABRB3, Length 5,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-216ENST00000628124 LAMA1P25391 3075 aa4.07□□□□□ -1.76
GABRB3-216ENST00000628124 KRTAP10-6P60371 365 aaPredicted RBP4.06□□□□□ -1.76
GABRB3-216ENST00000628124 KALRNO60229 2985 aa4.04□□□□□ -1.76
GABRB3-216ENST00000628124 KRTAP23-1A1A580 65 aa4.01□□□□□ -1.77
GABRB3-216ENST00000628124 DSPP15924 2871 aaKnown RBP4□□□□□ -1.77
GABRB3-216ENST00000628124 CFAP54Q96N23 3096 aa4□□□□□ -1.77
GABRB3-216ENST00000628124 TENM2Q9NT68 2774 aa3.99□□□□□ -1.77
GABRB3-216ENST00000628124 KRTAP12-3P60328 96 aa3.99□□□□□ -1.77
GABRB3-216ENST00000628124 DNAH12Q6ZR08 3092 aa3.98□□□□□ -1.77
GABRB3-216ENST00000628124 PDZD2O15018 2839 aa3.98□□□□□ -1.77
GABRB3-216ENST00000628124 TRANK1O15050 2925 aa3.98□□□□□ -1.77
GABRB3-216ENST00000628124 REV3LO60673 3130 aa3.97□□□□□ -1.77
GABRB3-216ENST00000628124 ASH1LQ9NR48 2969 aaKnown RBP3.96□□□□□ -1.78
GABRB3-216ENST00000628124 CRYBG3Q68DQ2 2970 aa3.95□□□□□ -1.78
GABRB3-216ENST00000628124 TACC2O95359 2948 aa3.94□□□□□ -1.78
GABRB3-216ENST00000628124 NF1P21359 2839 aa3.94□□□□□ -1.78
GABRB3-216ENST00000628124 CHD7Q9P2D1 2997 aa3.92□□□□□ -1.78
GABRB3-216ENST00000628124 CELSR2Q9HCU4 2923 aa3.9□□□□□ -1.78
GABRB3-216ENST00000628124 LRBAP50851 2863 aa3.9□□□□□ -1.79
GABRB3-216ENST00000628124 PCNTO95613 3336 aa3.89□□□□□ -1.79
GABRB3-216ENST00000628124 UTRNP46939 3433 aa3.88□□□□□ -1.79
GABRB3-216ENST00000628124 DMXL2Q8TDJ6 3036 aa3.88□□□□□ -1.79
GABRB3-216ENST00000628124 KRTAP10-5P60370 271 aa3.87□□□□□ -1.79
GABRB3-216ENST00000628124 TRIOO75962 3097 aa3.86□□□□□ -1.79
GABRB3-216ENST00000628124 DCHS2Q6V1P9 2916 aa3.86□□□□□ -1.79
GABRB3-216ENST00000628124 KRTAP3-2Q9BYR7 98 aa3.85□□□□□ -1.79
GABRB3-216ENST00000628124 LCE3AQ5TA76 89 aa3.83□□□□□ -1.8
GABRB3-216ENST00000628124 USP34Q70CQ2 3546 aa3.82□□□□□ -1.8
GABRB3-216ENST00000628124 LAMA2P24043 3122 aaKnown RBP3.81□□□□□ -1.8
GABRB3-216ENST00000628124 MT1HL1P0DM35 61 aa3.81□□□□□ -1.8
GABRB3-216ENST00000628124 PRUNE2Q8WUY3 3088 aa3.8□□□□□ -1.8
GABRB3-216ENST00000628124 KRTAP8-1Q8IUC2 63 aa3.8□□□□□ -1.8
GABRB3-216ENST00000628124 KRTAP3-3Q9BYR6 98 aa3.8□□□□□ -1.8
GABRB3-216ENST00000628124 WDFY4Q6ZS81 3184 aa3.79□□□□□ -1.8
GABRB3-216ENST00000628124 FBN3Q75N90 2809 aa3.78□□□□□ -1.8
GABRB3-216ENST00000628124 GOLGB1Q14789 3259 aaKnown RBP3.75□□□□□ -1.81
GABRB3-216ENST00000628124 FRYLO94915 3013 aa3.74□□□□□ -1.81
GABRB3-216ENST00000628124 COL12A1Q99715 3063 aa3.73□□□□□ -1.81
GABRB3-216ENST00000628124 PKD1L1Q8TDX9 2849 aa3.71□□□□□ -1.81
GABRB3-216ENST00000628124 ATMQ13315 3056 aa3.71□□□□□ -1.82
GABRB3-216ENST00000628124 FREM2Q5SZK8 3169 aa3.7□□□□□ -1.82
GABRB3-216ENST00000628124 ZANQ9Y493 2812 aa3.68□□□□□ -1.82
GABRB3-216ENST00000628124 VWFP04275 2813 aa3.66□□□□□ -1.82
GABRB3-216ENST00000628124 BRCA2P51587 3418 aa3.65□□□□□ -1.82
GABRB3-216ENST00000628124 TNRC18O15417 2968 aaPredicted RBP3.63□□□□□ -1.83
GABRB3-216ENST00000628124 ZZEF1O43149 2961 aa3.63□□□□□ -1.83
GABRB3-216ENST00000628124 CELSR1Q9NYQ6 3014 aa3.62□□□□□ -1.83
GABRB3-216ENST00000628124 UNC80Q8N2C7 3258 aa3.6□□□□□ -1.83
GABRB3-216ENST00000628124 LORP23490 312 aaPredicted RBP3.59□□□□□ -1.83
GABRB3-216ENST00000628124 KRTAP10-7P60409 375 aaPredicted RBP3.59□□□□□ -1.83
GABRB3-216ENST00000628124 SRRM2Q9UQ35 2752 aaKnown RBP3.58□□□□□ -1.84
GABRB3-216ENST00000628124 WDFY3Q8IZQ1 3526 aa3.58□□□□□ -1.84
GABRB3-216ENST00000628124 KRTAP19-4Q3LI73 84 aa3.57□□□□□ -1.84
GABRB3-216ENST00000628124 VPS13AQ96RL7 3174 aa3.56□□□□□ -1.84
GABRB3-216ENST00000628124 MXRA5Q9NR99 2828 aa3.55□□□□□ -1.84
GABRB3-216ENST00000628124 KRTAP10-4P60372 401 aaPredicted RBP3.55□□□□□ -1.84
GABRB3-216ENST00000628124 RANBP2P49792 3224 aaKnown RBP3.55□□□□□ -1.84
GABRB3-216ENST00000628124 SPTBN5Q9NRC6 3674 aaKnown RBP3.54□□□□□ -1.84
GABRB3-216ENST00000628124 ADGRG4Q8IZF6 3080 aa3.54□□□□□ -1.84
GABRB3-216ENST00000628124 BOD1L1Q8NFC6 3051 aa3.52□□□□□ -1.85
GABRB3-216ENST00000628124 SPENQ96T58 3664 aaKnown RBP3.51□□□□□ -1.85
GABRB3-216ENST00000628124 MEGF8Q7Z7M0 2845 aa3.51□□□□□ -1.85
GABRB3-216ENST00000628124 KRTAP4-5Q9BYR2 181 aa3.51□□□□□ -1.85
GABRB3-216ENST00000628124 DMXL1Q9Y485 3027 aa3.51□□□□□ -1.85
GABRB3-216ENST00000628124 NBEAQ8NFP9 2946 aa3.51□□□□□ -1.85
GABRB3-216ENST00000628124 CDH23Q9H251 3354 aa3.49□□□□□ -1.85
GABRB3-216ENST00000628124 EYSQ5T1H1 3165 aa3.49□□□□□ -1.85
GABRB3-216ENST00000628124 MYO15AQ9UKN7 3530 aa3.49□□□□□ -1.85
GABRB3-216ENST00000628124 FBN2P35556 2912 aa3.49□□□□□ -1.85
GABRB3-216ENST00000628124 LAMA3Q16787 3333 aa3.48□□□□□ -1.85
GABRB3-216ENST00000628124 HTTP42858 3142 aa3.46□□□□□ -1.86
GABRB3-216ENST00000628124 SPRR2FQ96RM1 72 aa3.46□□□□□ -1.86
GABRB3-216ENST00000628124 MKI67P46013 3256 aaKnown RBP3.46□□□□□ -1.86
GABRB3-216ENST00000628124 DMDP11532 3685 aa3.42□□□□□ -1.86
GABRB3-216ENST00000628124 DNAH14Q0VDD8 3507 aa3.41□□□□□ -1.86
GABRB3-216ENST00000628124 LCE3CQ5T5A8 94 aa3.41□□□□□ -1.86
GABRB3-216ENST00000628124 COL7A1Q02388 2944 aa3.41□□□□□ -1.86
GABRB3-216ENST00000628124 SPRR2GQ9BYE4 73 aa3.41□□□□□ -1.86
GABRB3-216ENST00000628124 HRNRQ86YZ3 2850 aaPredicted RBP3.41□□□□□ -1.86
GABRB3-216ENST00000628124 CFAP47Q6ZTR5 3102 aa3.4□□□□□ -1.86
GABRB3-216ENST00000628124 XIRP2A4UGR9 3374 aa3.39□□□□□ -1.87
GABRB3-216ENST00000628124 MT1HP80294 61 aa3.38□□□□□ -1.87
GABRB3-216ENST00000628124 KRTAP19-5Q3LI72 72 aa3.38□□□□□ -1.87
GABRB3-216ENST00000628124 SZT2Q5T011 3432 aa3.38□□□□□ -1.87
GABRB3-216ENST00000628124 VCANP13611 3396 aa3.37□□□□□ -1.87
GABRB3-216ENST00000628124 MT2AP02795 61 aa3.36□□□□□ -1.87
GABRB3-216ENST00000628124 MUC3AQ02505 3323 aa3.34□□□□□ -1.88
GABRB3-216ENST00000628124 CELSR3Q9NYQ7 3312 aa3.33□□□□□ -1.88
GABRB3-216ENST00000628124 HUWE1Q7Z6Z7 4374 aaKnown RBP3.3□□□□□ -1.88
GABRB3-216ENST00000628124 COL6A3P12111 3177 aa3.3□□□□□ -1.88
GABRB3-216ENST00000628124 SPEGQ15772 3267 aa3.3□□□□□ -1.88
GABRB3-216ENST00000628124 ZFHX3Q15911 3703 aa3.28□□□□□ -1.88
GABRB3-216ENST00000628124 SPRR2EP22531 72 aa3.26□□□□□ -1.89
GABRB3-216ENST00000628124 SPRR2BP35325 72 aa3.26□□□□□ -1.89
GABRB3-216ENST00000628124 SPRR2AP35326 72 aa3.26□□□□□ -1.89
GABRB3-216ENST00000628124 KRTAP12-4P60329 112 aa3.25□□□□□ -1.89
GABRB3-216ENST00000628124 MT1FP04733 61 aa3.24□□□□□ -1.89
GABRB3-216ENST00000628124 KRTAP4-1Q9BYQ7 146 aa3.23□□□□□ -1.89
GABRB3-216ENST00000628124 BSNQ9UPA5 3926 aa3.23□□□□□ -1.89
GABRB3-216ENST00000628124 ZFHX4Q86UP3 3567 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms