RNA–Protein interactions for RNA: ENST00000625402.1

SCARNA4-202, small Cajal body-specific RNA 4, humanhuman

BASIC

Gene SCARNA4, Length 129 nt, Biotype scaRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA4-202ENST00000625402 THOC2Q8NI27 1593 aaKnown RBP-0.79□□□□□ -2.54
SCARNA4-202ENST00000625402 EPRSP07814 1512 aaKnown RBP-0.79□□□□□ -2.54
SCARNA4-202ENST00000625402 CCNB3Q8WWL7 1395 aa-0.79□□□□□ -2.54
SCARNA4-202ENST00000625402 DEFB131BA0A096LNP1 70 aa-0.79□□□□□ -2.54
SCARNA4-202ENST00000625402 LINC01546A6NGU7 62 aa-0.79□□□□□ -2.54
SCARNA4-202ENST00000625402 TOGARAM1Q9Y4F4 1720 aa-0.79□□□□□ -2.54
SCARNA4-202ENST00000625402 MGAQ8IWI9 3026 aa-0.79□□□□□ -2.54
SCARNA4-202ENST00000625402 NESP48681 1621 aa-0.79□□□□□ -2.54
SCARNA4-202ENST00000625402 NEXMIFQ5QGS0 1516 aa-0.79□□□□□ -2.54
SCARNA4-202ENST00000625402 FANCAO15360 1455 aa-0.8□□□□□ -2.54
SCARNA4-202ENST00000625402 ATP10BO94823 1461 aa-0.8□□□□□ -2.54
SCARNA4-202ENST00000625402 VPS8Q8N3P4 1428 aa-0.8□□□□□ -2.54
SCARNA4-202ENST00000625402 LTN1O94822 1766 aa-0.8□□□□□ -2.54
SCARNA4-202ENST00000625402 ANKRD36CQ5JPF3 1778 aa-0.8□□□□□ -2.54
SCARNA4-202ENST00000625402 RGPD1P0DJD0 1748 aa-0.8□□□□□ -2.54
SCARNA4-202ENST00000625402 ZFHX4Q86UP3 3567 aa-0.8□□□□□ -2.54
SCARNA4-202ENST00000625402 A8MTW9 85 aa-0.8□□□□□ -2.54
SCARNA4-202ENST00000625402 UMAD1C9J7I0 102 aa-0.8□□□□□ -2.54
SCARNA4-202ENST00000625402 PKIAP61925 76 aa-0.8□□□□□ -2.54
SCARNA4-202ENST00000625402 BAZ1AQ9NRL2 1556 aaPredicted RBP-0.8□□□□□ -2.54
SCARNA4-202ENST00000625402 BOD1L1Q8NFC6 3051 aa-0.8□□□□□ -2.54
SCARNA4-202ENST00000625402 GYPAP02724 150 aa-0.81□□□□□ -2.54
SCARNA4-202ENST00000625402 SPART-AS1P0CW21 52 aa-0.81□□□□□ -2.54
SCARNA4-202ENST00000625402 CCDC88BA6NC98 1476 aa-0.81□□□□□ -2.54
SCARNA4-202ENST00000625402 SUPT6HQ7KZ85 1726 aaKnown RBP-0.81□□□□□ -2.54
SCARNA4-202ENST00000625402 ANKRD26Q9UPS8 1709 aa-0.81□□□□□ -2.54
SCARNA4-202ENST00000625402 ZNF831Q5JPB2 1677 aa-0.81□□□□□ -2.54
SCARNA4-202ENST00000625402 FREM2Q5SZK8 3169 aa-0.82□□□□□ -2.54
SCARNA4-202ENST00000625402 PRUNE2Q8WUY3 3088 aa-0.82□□□□□ -2.54
SCARNA4-202ENST00000625402 MYMXA0A1B0GTQ4 84 aa-0.82□□□□□ -2.54
SCARNA4-202ENST00000625402 NDUFA4O00483 81 aa-0.82□□□□□ -2.54
SCARNA4-202ENST00000625402 S100A8P05109 93 aa-0.82□□□□□ -2.54
SCARNA4-202ENST00000625402 DDX60LQ5H9U9 1706 aaKnown RBP-0.82□□□□□ -2.54
SCARNA4-202ENST00000625402 UBR1Q8IWV7 1749 aa-0.82□□□□□ -2.54
SCARNA4-202ENST00000625402 VPS13CQ709C8 3753 aa-0.83□□□□□ -2.54
SCARNA4-202ENST00000625402 KIAA0586Q9BVV6 1533 aa-0.83□□□□□ -2.54
SCARNA4-202ENST00000625402 POLR1AO95602 1720 aaPredicted RBP-0.83□□□□□ -2.54
SCARNA4-202ENST00000625402 CEBPZOSA8MTT3 80 aa-0.83□□□□□ -2.54
SCARNA4-202ENST00000625402 M0QY20 66 aa-0.83□□□□□ -2.54
SCARNA4-202ENST00000625402 DEFB4AO15263 64 aa-0.83□□□□□ -2.54
SCARNA4-202ENST00000625402 MINOS1Q5TGZ0 78 aa-0.83□□□□□ -2.54
SCARNA4-202ENST00000625402 RABAC1Q9UI14 185 aa-0.83□□□□□ -2.54
SCARNA4-202ENST00000625402 LY75O60449 1722 aa-0.84□□□□□ -2.54
SCARNA4-202ENST00000625402 PARP4Q9UKK3 1724 aaKnown RBP-0.84□□□□□ -2.54
SCARNA4-202ENST00000625402 URB2Q14146 1524 aaKnown RBP-0.84□□□□□ -2.54
SCARNA4-202ENST00000625402 ZC3H13Q5T200 1668 aaKnown RBP-0.84□□□□□ -2.54
SCARNA4-202ENST00000625402 TMEM131LA2VDJ0 1609 aa-0.84□□□□□ -2.54
SCARNA4-202ENST00000625402 RPS27P42677 84 aaKnown RBP-0.84□□□□□ -2.54
SCARNA4-202ENST00000625402 RPS29P62273 56 aaKnown RBP-0.84□□□□□ -2.54
SCARNA4-202ENST00000625402 SNRPFP62306 86 aaKnown RBP-0.84□□□□□ -2.54
SCARNA4-202ENST00000625402 RPS27LQ71UM5 84 aaKnown RBP-0.84□□□□□ -2.54
SCARNA4-202ENST00000625402 LINC00643Q86TS7 51 aa-0.84□□□□□ -2.54
SCARNA4-202ENST00000625402 UBL5Q9BZL1 73 aa-0.84□□□□□ -2.54
SCARNA4-202ENST00000625402 AKAP12Q02952 1782 aa-0.84□□□□□ -2.54
SCARNA4-202ENST00000625402 MAST1Q9Y2H9 1570 aa-0.84□□□□□ -2.54
SCARNA4-202ENST00000625402 ITSN1Q15811 1721 aa-0.84□□□□□ -2.54
SCARNA4-202ENST00000625402 DOT1LQ8TEK3 1739 aa-0.84□□□□□ -2.54
SCARNA4-202ENST00000625402 PVALEFA0A1B0GWK0 134 aa-0.85□□□□□ -2.55
SCARNA4-202ENST00000625402 CFAP54Q96N23 3096 aa-0.85□□□□□ -2.55
SCARNA4-202ENST00000625402 DIP2BQ9P265 1576 aa-0.85□□□□□ -2.55
SCARNA4-202ENST00000625402 NCOA2Q15596 1464 aa-0.86□□□□□ -2.55
SCARNA4-202ENST00000625402 MT1FP04733 61 aa-0.86□□□□□ -2.55
SCARNA4-202ENST00000625402 CRIP1P50238 77 aa-0.86□□□□□ -2.55
SCARNA4-202ENST00000625402 DEFB136Q30KP8 78 aa-0.86□□□□□ -2.55
SCARNA4-202ENST00000625402 PYY3Q5JQD4 70 aa-0.86□□□□□ -2.55
SCARNA4-202ENST00000625402 KCNQ1DNQ9H478 68 aa-0.86□□□□□ -2.55
SCARNA4-202ENST00000625402 C6orf48Q9UBA6 75 aa-0.86□□□□□ -2.55
SCARNA4-202ENST00000625402 KIF1AQ12756 1690 aa-0.86□□□□□ -2.55
SCARNA4-202ENST00000625402 ARFGEF2Q9Y6D5 1785 aa-0.86□□□□□ -2.55
SCARNA4-202ENST00000625402 CD163L1Q9NR16 1453 aa-0.86□□□□□ -2.55
SCARNA4-202ENST00000625402 HFM1A2PYH4 1435 aa-0.87□□□□□ -2.55
SCARNA4-202ENST00000625402 CEP162Q5TB80 1403 aa-0.87□□□□□ -2.55
SCARNA4-202ENST00000625402 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-0.87□□□□□ -2.55
SCARNA4-202ENST00000625402 KANTRA0A1W2PQU2 76 aa-0.87□□□□□ -2.55
SCARNA4-202ENST00000625402 FCER1GP30273 86 aa-0.87□□□□□ -2.55
SCARNA4-202ENST00000625402 NREPQ16612 68 aa-0.87□□□□□ -2.55
SCARNA4-202ENST00000625402 KRTAP19-6Q3LI70 58 aa-0.87□□□□□ -2.55
SCARNA4-202ENST00000625402 ATP5EP2Q5VTU8 51 aa-0.87□□□□□ -2.55
SCARNA4-202ENST00000625402 MYO15AQ9UKN7 3530 aa-0.88□□□□□ -2.55
SCARNA4-202ENST00000625402 ITSN2Q9NZM3 1697 aa-0.88□□□□□ -2.55
SCARNA4-202ENST00000625402 PPLO60437 1756 aa-0.88□□□□□ -2.55
SCARNA4-202ENST00000625402 A0A087WXM4 84 aa-0.88□□□□□ -2.55
SCARNA4-202ENST00000625402 ETDCA0A1B0GVM5 59 aa-0.88□□□□□ -2.55
SCARNA4-202ENST00000625402 RALGAPBQ86X10 1494 aa-0.88□□□□□ -2.55
SCARNA4-202ENST00000625402 CRYBG3Q68DQ2 2970 aa-0.88□□□□□ -2.55
SCARNA4-202ENST00000625402 MYO3AQ8NEV4 1616 aa-0.89□□□□□ -2.55
SCARNA4-202ENST00000625402 LRRIQ1Q96JM4 1722 aa-0.89□□□□□ -2.55
SCARNA4-202ENST00000625402 DMDP11532 3685 aa-0.89□□□□□ -2.55
SCARNA4-202ENST00000625402 ABRACLQ9P1F3 81 aa-0.89□□□□□ -2.55
SCARNA4-202ENST00000625402 ARHGAP35Q9NRY4 1499 aa-0.89□□□□□ -2.55
SCARNA4-202ENST00000625402 SMARCA2P51531 1590 aa-0.89□□□□□ -2.55
SCARNA4-202ENST00000625402 A0A1B0GUL6 1792 aa-0.89□□□□□ -2.55
SCARNA4-202ENST00000625402 NRAPQ86VF7 1730 aa-0.89□□□□□ -2.55
SCARNA4-202ENST00000625402 INO80Q9ULG1 1556 aaPredicted RBP-0.9□□□□□ -2.55
SCARNA4-202ENST00000625402 SFTA3P0C7M3 94 aa-0.9□□□□□ -2.55
SCARNA4-202ENST00000625402 S100A16Q96FQ6 103 aaKnown RBP-0.9□□□□□ -2.55
SCARNA4-202ENST00000625402 TJP1Q07157 1748 aa-0.9□□□□□ -2.55
SCARNA4-202ENST00000625402 PLCH1Q4KWH8 1693 aa-0.91□□□□□ -2.55
SCARNA4-202ENST00000625402 DEFB114Q30KQ6 69 aa-0.91□□□□□ -2.56
SCARNA4-202ENST00000625402 LEAP2Q969E1 77 aa-0.91□□□□□ -2.56
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms