RNA–Protein interactions for RNA: ENST00000622633.4

LITAF-221, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-221ENST00000622633 SPRR1BP22528 89 aa7.53□□□□□ -1.2
LITAF-221ENST00000622633 DNAH7Q8WXX0 4024 aa7.51□□□□□ -1.21
LITAF-221ENST00000622633 NBDYA0A0U1RRE5 68 aa7.5□□□□□ -1.21
LITAF-221ENST00000622633 PLECQ15149 4684 aaKnown RBP7.5□□□□□ -1.21
LITAF-221ENST00000622633 LINC00472Q9H8W2 130 aa7.5□□□□□ -1.21
LITAF-221ENST00000622633 DYNC2H1Q8NCM8 4307 aaKnown RBP7.49□□□□□ -1.21
LITAF-221ENST00000622633 A8MWP4 228 aa7.49□□□□□ -1.21
LITAF-221ENST00000622633 ZNF861PO60384 105 aa7.48□□□□□ -1.21
LITAF-221ENST00000622633 MIR22HGQ0VDD5 57 aa7.47□□□□□ -1.21
LITAF-221ENST00000622633 Q6ZRN7 208 aaPredicted RBP7.47□□□□□ -1.21
LITAF-221ENST00000622633 P0C880 135 aa7.46□□□□□ -1.21
LITAF-221ENST00000622633 KRTAP13-1Q8IUC0 172 aa7.46□□□□□ -1.21
LITAF-221ENST00000622633 ALMS1Q8TCU4 4167 aa7.46□□□□□ -1.22
LITAF-221ENST00000622633 MMP24-AS1A0A0U1RRL7 71 aa7.46□□□□□ -1.22
LITAF-221ENST00000622633 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.45□□□□□ -1.22
LITAF-221ENST00000622633 IGLV9-49A0A0B4J1Y8 123 aa7.44□□□□□ -1.22
LITAF-221ENST00000622633 A0A1B0GU69 56 aa7.42□□□□□ -1.22
LITAF-221ENST00000622633 SPACA4Q8TDM5 124 aa7.42□□□□□ -1.22
LITAF-221ENST00000622633 NUPR2A6NF83 97 aa7.41□□□□□ -1.22
LITAF-221ENST00000622633 KRTAP25-1Q3LHN0 102 aa7.41□□□□□ -1.22
LITAF-221ENST00000622633 UQCR11O14957 56 aa7.4□□□□□ -1.22
LITAF-221ENST00000622633 TP53AIP1Q9HCN2 124 aa7.4□□□□□ -1.23
LITAF-221ENST00000622633 A0A087WTM6 91 aa7.38□□□□□ -1.23
LITAF-221ENST00000622633 Q96NJ1 140 aa7.38□□□□□ -1.23
LITAF-221ENST00000622633 ANAPC11Q9NYG5 84 aa7.37□□□□□ -1.23
LITAF-221ENST00000622633 VPS13DQ5THJ4 4388 aa7.36□□□□□ -1.23
LITAF-221ENST00000622633 STARD9Q9P2P6 4700 aa7.35□□□□□ -1.23
LITAF-221ENST00000622633 LINC00483Q53H64 154 aa7.35□□□□□ -1.23
LITAF-221ENST00000622633 PSORS1C2Q9UIG4 136 aa7.35□□□□□ -1.23
LITAF-221ENST00000622633 PRKDCP78527 4128 aaKnown RBP7.34□□□□□ -1.23
LITAF-221ENST00000622633 ACYP2P14621 99 aa7.33□□□□□ -1.24
LITAF-221ENST00000622633 LCE2DQ5TA82 110 aaPredicted RBP7.32□□□□□ -1.24
LITAF-221ENST00000622633 WWC2-AS2Q96NR7 200 aa7.32□□□□□ -1.24
LITAF-221ENST00000622633 DNHD1Q96M86 4753 aa7.32□□□□□ -1.24
LITAF-221ENST00000622633 IGLV5-52A0A0A0MRZ9 124 aa7.32□□□□□ -1.24
LITAF-221ENST00000622633 C8orf17Q9NRJ1 99 aa7.32□□□□□ -1.24
LITAF-221ENST00000622633 DNAH8Q96JB1 4490 aa7.31□□□□□ -1.24
LITAF-221ENST00000622633 NOTCH2NLQ7Z3S9 236 aa7.29□□□□□ -1.24
LITAF-221ENST00000622633 A8MUU9 505 aa7.29□□□□□ -1.24
LITAF-221ENST00000622633 HECTD4Q9Y4D8 3996 aa7.29□□□□□ -1.24
LITAF-221ENST00000622633 DMAC1Q96GE9 116 aa7.28□□□□□ -1.24
LITAF-221ENST00000622633 DNAH2Q9P225 4427 aa7.28□□□□□ -1.24
LITAF-221ENST00000622633 DNAH17Q9UFH2 4485 aa7.27□□□□□ -1.24
LITAF-221ENST00000622633 A0A1B0GVX0 72 aa7.27□□□□□ -1.24
LITAF-221ENST00000622633 CDK2AP2O75956 126 aa7.27□□□□□ -1.25
LITAF-221ENST00000622633 FRAS1Q86XX4 4008 aa7.26□□□□□ -1.25
LITAF-221ENST00000622633 KMT2AQ03164 3969 aa7.25□□□□□ -1.25
LITAF-221ENST00000622633 MRPL34Q9BQ48 92 aaKnown RBP7.23□□□□□ -1.25
LITAF-221ENST00000622633 SPINK6Q6UWN8 80 aa7.22□□□□□ -1.25
LITAF-221ENST00000622633 TGP01266 2768 aa7.22□□□□□ -1.25
LITAF-221ENST00000622633 MEGF8Q7Z7M0 2845 aa7.2□□□□□ -1.26
LITAF-221ENST00000622633 FBN3Q75N90 2809 aa7.2□□□□□ -1.26
LITAF-221ENST00000622633 IGLV7-43P04211 117 aa7.2□□□□□ -1.26
LITAF-221ENST00000622633 CIRBP-AS1Q8TBR5 109 aa7.2□□□□□ -1.26
LITAF-221ENST00000622633 LINC00304Q8N9R0 145 aa7.19□□□□□ -1.26
LITAF-221ENST00000622633 KRTAP16-1A8MUX0 517 aa7.18□□□□□ -1.26
LITAF-221ENST00000622633 Q5W150 140 aa7.17□□□□□ -1.26
LITAF-221ENST00000622633 KRTAP13-3Q3SY46 172 aa7.16□□□□□ -1.26
LITAF-221ENST00000622633 LY6G6CO95867 125 aa7.15□□□□□ -1.27
LITAF-221ENST00000622633 NDUFAF8A1L188 74 aa7.14□□□□□ -1.27
LITAF-221ENST00000622633 KRTAP3-3Q9BYR6 98 aa7.14□□□□□ -1.27
LITAF-221ENST00000622633 KRTAP3-2Q9BYR7 98 aa7.14□□□□□ -1.27
LITAF-221ENST00000622633 C20orf166-AS1Q96NR2 134 aa7.13□□□□□ -1.27
LITAF-221ENST00000622633 DNAH11Q96DT5 4516 aa7.11□□□□□ -1.27
LITAF-221ENST00000622633 KRTAP10-2P60368 255 aa7.11□□□□□ -1.27
LITAF-221ENST00000622633 CRIPTQ9P021 101 aa7.11□□□□□ -1.27
LITAF-221ENST00000622633 DNAH6Q9C0G6 4158 aa7.1□□□□□ -1.27
LITAF-221ENST00000622633 SSBP3-AS1Q7Z2R9 100 aa7.1□□□□□ -1.27
LITAF-221ENST00000622633 FLG2Q5D862 2391 aaPredicted RBP7.08□□□□□ -1.28
LITAF-221ENST00000622633 DNAH5Q8TE73 4624 aa7.08□□□□□ -1.28
LITAF-221ENST00000622633 KRTAP13-2Q52LG2 175 aa7.04□□□□□ -1.28
LITAF-221ENST00000622633 H0YAA0 97 aa7.04□□□□□ -1.28
LITAF-221ENST00000622633 LRP1BQ9NZR2 4599 aa7.03□□□□□ -1.28
LITAF-221ENST00000622633 KRTAP10-1P60331 282 aa7.02□□□□□ -1.29
LITAF-221ENST00000622633 SPINT4Q6UDR6 99 aa7.01□□□□□ -1.29
LITAF-221ENST00000622633 KRTAP15-1Q3LI76 137 aa7□□□□□ -1.29
LITAF-221ENST00000622633 Q6ZSA8 131 aa6.99□□□□□ -1.29
LITAF-221ENST00000622633 FAM229AH3BQW9 127 aa6.97□□□□□ -1.29
LITAF-221ENST00000622633 PKD1P98161 4303 aa6.95□□□□□ -1.3
LITAF-221ENST00000622633 HYDINQ4G0P3 5121 aa6.94□□□□□ -1.3
LITAF-221ENST00000622633 KRTAP1-4P0C5Y4 121 aa6.94□□□□□ -1.3
LITAF-221ENST00000622633 IGKV2-30P06310 120 aa6.93□□□□□ -1.3
LITAF-221ENST00000622633 FAT2Q9NYQ8 4349 aa6.92□□□□□ -1.3
LITAF-221ENST00000622633 VPS13BQ7Z7G8 4022 aa6.89□□□□□ -1.31
LITAF-221ENST00000622633 IGKV2D-30A0A075B6S6 120 aa6.88□□□□□ -1.31
LITAF-221ENST00000622633 LUZP6Q538Z0 58 aa6.87□□□□□ -1.31
LITAF-221ENST00000622633 TYMSOSQ8TAI1 123 aa6.87□□□□□ -1.31
LITAF-221ENST00000622633 TPRXLQ17RH7 258 aa6.85□□□□□ -1.31
LITAF-221ENST00000622633 SPINK1P00995 79 aa6.84□□□□□ -1.32
LITAF-221ENST00000622633 A0A1B0GU33 70 aa6.81□□□□□ -1.32
LITAF-221ENST00000622633 SACSQ9NZJ4 4579 aa6.79□□□□□ -1.32
LITAF-221ENST00000622633 J3QL48 77 aa6.78□□□□□ -1.32
LITAF-221ENST00000622633 H1FX-AS1Q4G0G2 97 aa6.75□□□□□ -1.33
LITAF-221ENST00000622633 K7ERS5 55 aa6.75□□□□□ -1.33
LITAF-221ENST00000622633 PKHD1P08F94 4074 aa6.75□□□□□ -1.33
LITAF-221ENST00000622633 SMR3BP02814 79 aaPredicted RBP6.74□□□□□ -1.33
LITAF-221ENST00000622633 Q8N1X5 172 aa6.73□□□□□ -1.33
LITAF-221ENST00000622633 C10orf95Q9H7T3 257 aa6.71□□□□□ -1.34
LITAF-221ENST00000622633 DYNC1H1Q14204 4646 aaKnown RBP6.7□□□□□ -1.34
LITAF-221ENST00000622633 C9orf92A6NGG3 77 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms