RNA–Protein interactions for RNA: ENST00000622383.1

NKX2-3-202, Transcript of NK2 homeobox 3, humanhuman

TSL 5 BASIC

Gene NKX2-3, Length 1,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3-202ENST00000622383 NOTCH2NLQ7Z3S9 236 aa13.35□□□□□ -0.27
NKX2-3-202ENST00000622383 C1orf64Q8NEQ6 169 aa13.32□□□□□ -0.28
NKX2-3-202ENST00000622383 KRTAP13-2Q52LG2 175 aa13.32□□□□□ -0.28
NKX2-3-202ENST00000622383 CYP4F30PQ9H0H9 118 aa13.31□□□□□ -0.28
NKX2-3-202ENST00000622383 TP53AIP1Q9HCN2 124 aa13.31□□□□□ -0.28
NKX2-3-202ENST00000622383 SPINK6Q6UWN8 80 aa13.31□□□□□ -0.28
NKX2-3-202ENST00000622383 PRR4Q16378 134 aa13.29□□□□□ -0.28
NKX2-3-202ENST00000622383 MRPL34Q9BQ48 92 aaKnown RBP13.29□□□□□ -0.28
NKX2-3-202ENST00000622383 SACSQ9NZJ4 4579 aa13.27□□□□□ -0.28
NKX2-3-202ENST00000622383 VPS13BQ7Z7G8 4022 aa13.26□□□□□ -0.29
NKX2-3-202ENST00000622383 KRTAP1-4P0C5Y4 121 aa13.25□□□□□ -0.29
NKX2-3-202ENST00000622383 NDUFS5O43920 106 aa13.23□□□□□ -0.29
NKX2-3-202ENST00000622383 SPANXA2-OT1Q8N9U9 137 aa13.23□□□□□ -0.29
NKX2-3-202ENST00000622383 PKHD1P08F94 4074 aa13.18□□□□□ -0.3
NKX2-3-202ENST00000622383 MPLKIPQ8TAP9 179 aa13.14□□□□□ -0.31
NKX2-3-202ENST00000622383 C1orf195Q5TG92 126 aa13.14□□□□□ -0.31
NKX2-3-202ENST00000622383 C8orf87E5RJ46 101 aa13.11□□□□□ -0.31
NKX2-3-202ENST00000622383 PCOTHQ58A44 107 aa13.1□□□□□ -0.31
NKX2-3-202ENST00000622383 IGLV7-46A0A075B6I9 117 aa13.09□□□□□ -0.31
NKX2-3-202ENST00000622383 PLA2G1BP04054 148 aaKnown RBP13.09□□□□□ -0.31
NKX2-3-202ENST00000622383 KRTAP13-3Q3SY46 172 aa13.07□□□□□ -0.32
NKX2-3-202ENST00000622383 Q5W150 140 aa13.07□□□□□ -0.32
NKX2-3-202ENST00000622383 LINC00336Q6ZUF6 198 aa13.06□□□□□ -0.32
NKX2-3-202ENST00000622383 DYNC1H1Q14204 4646 aaKnown RBP13.05□□□□□ -0.32
NKX2-3-202ENST00000622383 LINC00313P59037 77 aa13.05□□□□□ -0.32
NKX2-3-202ENST00000622383 LIMD2Q9BT23 127 aa13.02□□□□□ -0.32
NKX2-3-202ENST00000622383 TYMSOSQ8TAI1 123 aa13.01□□□□□ -0.33
NKX2-3-202ENST00000622383 A0A1B0GVY2 172 aa13.01□□□□□ -0.33
NKX2-3-202ENST00000622383 Q1T7F1 81 aa13□□□□□ -0.33
NKX2-3-202ENST00000622383 KMT2CQ8NEZ4 4911 aaKnown RBP12.97□□□□□ -0.33
NKX2-3-202ENST00000622383 LOC101927531A0A1B0GV80 90 aa12.97□□□□□ -0.33
NKX2-3-202ENST00000622383 Q8N9P0 234 aaPredicted RBP12.97□□□□□ -0.33
NKX2-3-202ENST00000622383 C4orf48Q5BLP8 95 aa12.95□□□□□ -0.34
NKX2-3-202ENST00000622383 KRTAP16-1A8MUX0 517 aa12.94□□□□□ -0.34
NKX2-3-202ENST00000622383 SMR3BP02814 79 aaPredicted RBP12.94□□□□□ -0.34
NKX2-3-202ENST00000622383 SPINK1P00995 79 aa12.94□□□□□ -0.34
NKX2-3-202ENST00000622383 RYR2Q92736 4967 aa12.93□□□□□ -0.34
NKX2-3-202ENST00000622383 COA5Q86WW8 74 aa12.91□□□□□ -0.34
NKX2-3-202ENST00000622383 PRR26Q8N8Z3 221 aa12.91□□□□□ -0.34
NKX2-3-202ENST00000622383 APOBP04114 4563 aaKnown RBP12.9□□□□□ -0.34
NKX2-3-202ENST00000622383 FAM229AH3BQW9 127 aa12.87□□□□□ -0.35
NKX2-3-202ENST00000622383 KRTAP10-4P60372 401 aaPredicted RBP12.85□□□□□ -0.35
NKX2-3-202ENST00000622383 FAT1Q14517 4588 aa12.85□□□□□ -0.35
NKX2-3-202ENST00000622383 LINC00304Q8N9R0 145 aa12.84□□□□□ -0.35
NKX2-3-202ENST00000622383 RETNLBQ9BQ08 111 aa12.83□□□□□ -0.36
NKX2-3-202ENST00000622383 PSPHP1O15172 72 aa12.81□□□□□ -0.36
NKX2-3-202ENST00000622383 RPS29P62273 56 aaKnown RBP12.81□□□□□ -0.36
NKX2-3-202ENST00000622383 V9GYY9 64 aa12.81□□□□□ -0.36
NKX2-3-202ENST00000622383 HRES1P13985 223 aa12.8□□□□□ -0.36
NKX2-3-202ENST00000622383 SPAG11AQ6PDA7 123 aa12.77□□□□□ -0.37
NKX2-3-202ENST00000622383 PRO0628Q9UI54 55 aa12.77□□□□□ -0.37
NKX2-3-202ENST00000622383 IGKV2-30P06310 120 aa12.76□□□□□ -0.37
NKX2-3-202ENST00000622383 A8MUN3 132 aa12.74□□□□□ -0.37
NKX2-3-202ENST00000622383 BRK1Q8WUW1 75 aa12.74□□□□□ -0.37
NKX2-3-202ENST00000622383 PKHD1L1Q86WI1 4243 aa12.72□□□□□ -0.37
NKX2-3-202ENST00000622383 Q5VV11 94 aa12.67□□□□□ -0.38
NKX2-3-202ENST00000622383 RYR3Q15413 4870 aa12.66□□□□□ -0.38
NKX2-3-202ENST00000622383 DMAC1Q96GE9 116 aa12.63□□□□□ -0.39
NKX2-3-202ENST00000622383 PRR15LQ9BU68 103 aa12.62□□□□□ -0.39
NKX2-3-202ENST00000622383 ACYP2P14621 99 aa12.61□□□□□ -0.39
NKX2-3-202ENST00000622383 IGKV2D-30A0A075B6S6 120 aa12.59□□□□□ -0.39
NKX2-3-202ENST00000622383 LINC01558Q9Y6Z2 57 aa12.58□□□□□ -0.4
NKX2-3-202ENST00000622383 CHKB-CPT1BH3BT56 60 aa12.51□□□□□ -0.41
NKX2-3-202ENST00000622383 Q75L30 129 aa12.51□□□□□ -0.41
NKX2-3-202ENST00000622383 C9orf92A6NGG3 77 aa12.49□□□□□ -0.41
NKX2-3-202ENST00000622383 A8MUU9 505 aa12.45□□□□□ -0.42
NKX2-3-202ENST00000622383 C20orf166-AS1Q96NR2 134 aa12.45□□□□□ -0.42
NKX2-3-202ENST00000622383 C7orf65Q6ZTY9 151 aa12.43□□□□□ -0.42
NKX2-3-202ENST00000622383 HSPG2P98160 4391 aa12.42□□□□□ -0.42
NKX2-3-202ENST00000622383 A8MU10 97 aa12.41□□□□□ -0.42
NKX2-3-202ENST00000622383 Q8N1X5 172 aa12.37□□□□□ -0.43
NKX2-3-202ENST00000622383 TNXBP22105 4242 aa12.36□□□□□ -0.43
NKX2-3-202ENST00000622383 LRP1Q07954 4544 aaKnown RBP12.35□□□□□ -0.43
NKX2-3-202ENST00000622383 Q5VSD8 79 aa12.35□□□□□ -0.43
NKX2-3-202ENST00000622383 FLG2Q5D862 2391 aaPredicted RBP12.34□□□□□ -0.43
NKX2-3-202ENST00000622383 A6NED7 52 aa12.34□□□□□ -0.43
NKX2-3-202ENST00000622383 KRTAP10-8P60410 259 aa12.34□□□□□ -0.43
NKX2-3-202ENST00000622383 LCA10Q71F78 164 aa12.32□□□□□ -0.44
NKX2-3-202ENST00000622383 FAT3Q8TDW7 4589 aa12.3□□□□□ -0.44
NKX2-3-202ENST00000622383 RYR1P21817 5038 aa12.29□□□□□ -0.44
NKX2-3-202ENST00000622383 SPINK7P58062 85 aa12.27□□□□□ -0.45
NKX2-3-202ENST00000622383 KRTAP17-1Q9BYP8 105 aa12.26□□□□□ -0.45
NKX2-3-202ENST00000622383 EPPK1P58107 5090 aaKnown RBP12.21□□□□□ -0.45
NKX2-3-202ENST00000622383 CDC42SE1Q9NRR8 79 aa12.21□□□□□ -0.45
NKX2-3-202ENST00000622383 A0A1B0GU69 56 aa12.16□□□□□ -0.46
NKX2-3-202ENST00000622383 KRTAP3-1Q9BYR8 98 aa12.12□□□□□ -0.47
NKX2-3-202ENST00000622383 KIAA1109Q2LD37 5005 aa12.12□□□□□ -0.47
NKX2-3-202ENST00000622383 ATP11AUNQ6ZP68 121 aa12.1□□□□□ -0.47
NKX2-3-202ENST00000622383 SPTSSBQ8NFR3 76 aa12.09□□□□□ -0.47
NKX2-3-202ENST00000622383 PMAIP1Q13794 54 aa12.04□□□□□ -0.48
NKX2-3-202ENST00000622383 MT1HL1P0DM35 61 aa12.02□□□□□ -0.49
NKX2-3-202ENST00000622383 MYCBP2O75592 4640 aa12.01□□□□□ -0.49
NKX2-3-202ENST00000622383 DMBT1Q9UGM3 2413 aaPredicted RBP11.99□□□□□ -0.49
NKX2-3-202ENST00000622383 RPL37P61927 97 aaKnown RBP11.97□□□□□ -0.49
NKX2-3-202ENST00000622383 XP32Q5T750 250 aa11.96□□□□□ -0.5
NKX2-3-202ENST00000622383 COX6B2Q6YFQ2 88 aa11.94□□□□□ -0.5
NKX2-3-202ENST00000622383 A6NN06 94 aa11.91□□□□□ -0.5
NKX2-3-202ENST00000622383 SPATA8Q6RVD6 105 aa11.91□□□□□ -0.5
NKX2-3-202ENST00000622383 UQCR11O14957 56 aa11.9□□□□□ -0.5
NKX2-3-202ENST00000622383 MIR22HGQ0VDD5 57 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms