RNA–Protein interactions for RNA: ENST00000622309.4

VPS11-209, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 3,352 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-209ENST00000622309 DNAH10OSP0CZ25 163 aa4.81□□□□□ -1.64
VPS11-209ENST00000622309 ZNF861PO60384 105 aa4.8□□□□□ -1.64
VPS11-209ENST00000622309 CRIPTQ9P021 101 aa4.8□□□□□ -1.64
VPS11-209ENST00000622309 KRTAP10-11P60412 298 aa4.79□□□□□ -1.64
VPS11-209ENST00000622309 KRTAP7-1Q8IUC3 87 aa4.79□□□□□ -1.64
VPS11-209ENST00000622309 NOTCH2NLQ7Z3S9 236 aa4.79□□□□□ -1.64
VPS11-209ENST00000622309 MRPL34Q9BQ48 92 aaKnown RBP4.79□□□□□ -1.64
VPS11-209ENST00000622309 PRKDCP78527 4128 aaKnown RBP4.79□□□□□ -1.64
VPS11-209ENST00000622309 KRTAP25-1Q3LHN0 102 aa4.77□□□□□ -1.65
VPS11-209ENST00000622309 A0A1B0GVX0 72 aa4.76□□□□□ -1.65
VPS11-209ENST00000622309 K7EIL1 84 aa4.75□□□□□ -1.65
VPS11-209ENST00000622309 WWC2-AS2Q96NR7 200 aa4.75□□□□□ -1.65
VPS11-209ENST00000622309 CMYA5Q8N3K9 4069 aa4.75□□□□□ -1.65
VPS11-209ENST00000622309 DMAC1Q96GE9 116 aa4.74□□□□□ -1.65
VPS11-209ENST00000622309 C20orf166-AS1Q96NR2 134 aa4.74□□□□□ -1.65
VPS11-209ENST00000622309 LINC01556Q5JQF7 62 aa4.74□□□□□ -1.65
VPS11-209ENST00000622309 SPRR1BP22528 89 aa4.73□□□□□ -1.65
VPS11-209ENST00000622309 SPINT4Q6UDR6 99 aa4.72□□□□□ -1.65
VPS11-209ENST00000622309 Q96NJ1 140 aa4.71□□□□□ -1.65
VPS11-209ENST00000622309 KMT2CQ8NEZ4 4911 aaKnown RBP4.71□□□□□ -1.66
VPS11-209ENST00000622309 H3BNG1 76 aa4.7□□□□□ -1.66
VPS11-209ENST00000622309 CASC10Q5T4H9 136 aa4.7□□□□□ -1.66
VPS11-209ENST00000622309 Q5W150 140 aa4.7□□□□□ -1.66
VPS11-209ENST00000622309 RYR3Q15413 4870 aa4.7□□□□□ -1.66
VPS11-209ENST00000622309 CIRBP-AS1Q8TBR5 109 aa4.7□□□□□ -1.66
VPS11-209ENST00000622309 LINC00483Q53H64 154 aa4.69□□□□□ -1.66
VPS11-209ENST00000622309 CSMD3Q7Z407 3707 aa4.69□□□□□ -1.66
VPS11-209ENST00000622309 LYSTQ99698 3801 aa4.69□□□□□ -1.66
VPS11-209ENST00000622309 IGLV7-43P04211 117 aa4.69□□□□□ -1.66
VPS11-209ENST00000622309 STAB2Q8WWQ8 2551 aa4.68□□□□□ -1.66
VPS11-209ENST00000622309 IGLV5-52A0A0A0MRZ9 124 aa4.68□□□□□ -1.66
VPS11-209ENST00000622309 TENM2Q9NT68 2774 aa4.67□□□□□ -1.66
VPS11-209ENST00000622309 A8MUU9 505 aa4.67□□□□□ -1.66
VPS11-209ENST00000622309 K7ERS5 55 aa4.66□□□□□ -1.66
VPS11-209ENST00000622309 COL7A1Q02388 2944 aa4.65□□□□□ -1.66
VPS11-209ENST00000622309 SRRM2Q9UQ35 2752 aaKnown RBP4.64□□□□□ -1.67
VPS11-209ENST00000622309 BIRC6Q9NR09 4857 aa4.64□□□□□ -1.67
VPS11-209ENST00000622309 KRTAP13-3Q3SY46 172 aa4.64□□□□□ -1.67
VPS11-209ENST00000622309 SPINK6Q6UWN8 80 aa4.64□□□□□ -1.67
VPS11-209ENST00000622309 LINC00304Q8N9R0 145 aa4.64□□□□□ -1.67
VPS11-209ENST00000622309 HUWE1Q7Z6Z7 4374 aaKnown RBP4.63□□□□□ -1.67
VPS11-209ENST00000622309 DNAH3Q8TD57 4116 aa4.62□□□□□ -1.67
VPS11-209ENST00000622309 KRTAP17-1Q9BYP8 105 aa4.61□□□□□ -1.67
VPS11-209ENST00000622309 DNAH10Q8IVF4 4471 aa4.61□□□□□ -1.67
VPS11-209ENST00000622309 SSBP3-AS1Q7Z2R9 100 aa4.61□□□□□ -1.67
VPS11-209ENST00000622309 KRTAP11-1Q8IUC1 163 aa4.61□□□□□ -1.67
VPS11-209ENST00000622309 ALMS1Q8TCU4 4167 aa4.6□□□□□ -1.67
VPS11-209ENST00000622309 SPINK1P00995 79 aa4.6□□□□□ -1.67
VPS11-209ENST00000622309 UBE2DNLQ8IWF7 75 aa4.59□□□□□ -1.67
VPS11-209ENST00000622309 LY6G6CO95867 125 aa4.58□□□□□ -1.68
VPS11-209ENST00000622309 IGKV2-30P06310 120 aa4.58□□□□□ -1.68
VPS11-209ENST00000622309 DYNC2H1Q8NCM8 4307 aaKnown RBP4.57□□□□□ -1.68
VPS11-209ENST00000622309 DNAH7Q8WXX0 4024 aa4.56□□□□□ -1.68
VPS11-209ENST00000622309 H0YAA0 97 aa4.55□□□□□ -1.68
VPS11-209ENST00000622309 RYR2Q92736 4967 aa4.55□□□□□ -1.68
VPS11-209ENST00000622309 DNAH9Q9NYC9 4486 aa4.55□□□□□ -1.68
VPS11-209ENST00000622309 EPPK1P58107 5090 aaKnown RBP4.55□□□□□ -1.68
VPS11-209ENST00000622309 IGKV2D-30A0A075B6S6 120 aa4.54□□□□□ -1.68
VPS11-209ENST00000622309 DMBT1Q9UGM3 2413 aaPredicted RBP4.54□□□□□ -1.68
VPS11-209ENST00000622309 Q6ZSA8 131 aa4.54□□□□□ -1.68
VPS11-209ENST00000622309 NUPR2A6NF83 97 aa4.53□□□□□ -1.68
VPS11-209ENST00000622309 PANO1I0J062 215 aa4.53□□□□□ -1.68
VPS11-209ENST00000622309 KRTAP1-5Q9BYS1 174 aa4.53□□□□□ -1.68
VPS11-209ENST00000622309 C14orf177Q52M58 125 aa4.51□□□□□ -1.69
VPS11-209ENST00000622309 PLECQ15149 4684 aaKnown RBP4.51□□□□□ -1.69
VPS11-209ENST00000622309 DNAH1Q9P2D7 4330 aa4.51□□□□□ -1.69
VPS11-209ENST00000622309 A0A1B0GU33 70 aa4.51□□□□□ -1.69
VPS11-209ENST00000622309 KRTAP13-1Q8IUC0 172 aa4.51□□□□□ -1.69
VPS11-209ENST00000622309 PSORS1C2Q9UIG4 136 aa4.51□□□□□ -1.69
VPS11-209ENST00000622309 ANAPC11Q9NYG5 84 aa4.5□□□□□ -1.69
VPS11-209ENST00000622309 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.5□□□□□ -1.69
VPS11-209ENST00000622309 SACSQ9NZJ4 4579 aa4.49□□□□□ -1.69
VPS11-209ENST00000622309 A0A087WTM6 91 aa4.48□□□□□ -1.69
VPS11-209ENST00000622309 STARD9Q9P2P6 4700 aa4.46□□□□□ -1.7
VPS11-209ENST00000622309 Q8N1X5 172 aa4.45□□□□□ -1.7
VPS11-209ENST00000622309 APLNQ9ULZ1 77 aa4.45□□□□□ -1.7
VPS11-209ENST00000622309 H1FX-AS1Q4G0G2 97 aa4.45□□□□□ -1.7
VPS11-209ENST00000622309 KMT2AQ03164 3969 aa4.43□□□□□ -1.7
VPS11-209ENST00000622309 TYMSOSQ8TAI1 123 aa4.43□□□□□ -1.7
VPS11-209ENST00000622309 KRTAP15-1Q3LI76 137 aa4.42□□□□□ -1.7
VPS11-209ENST00000622309 HERC2O95714 4834 aa4.42□□□□□ -1.7
VPS11-209ENST00000622309 NBDYA0A0U1RRE5 68 aa4.4□□□□□ -1.7
VPS11-209ENST00000622309 HYDINQ4G0P3 5121 aa4.39□□□□□ -1.71
VPS11-209ENST00000622309 TPRXLQ17RH7 258 aa4.38□□□□□ -1.71
VPS11-209ENST00000622309 FRAS1Q86XX4 4008 aa4.36□□□□□ -1.71
VPS11-209ENST00000622309 DNAH2Q9P225 4427 aa4.35□□□□□ -1.71
VPS11-209ENST00000622309 VPS13DQ5THJ4 4388 aa4.34□□□□□ -1.71
VPS11-209ENST00000622309 PCLOQ9Y6V0 5065 aa4.34□□□□□ -1.71
VPS11-209ENST00000622309 Q6ZRN7 208 aaPredicted RBP4.34□□□□□ -1.72
VPS11-209ENST00000622309 SPACA4Q8TDM5 124 aa4.34□□□□□ -1.72
VPS11-209ENST00000622309 C10orf95Q9H7T3 257 aa4.34□□□□□ -1.72
VPS11-209ENST00000622309 RPL37P61927 97 aaKnown RBP4.33□□□□□ -1.72
VPS11-209ENST00000622309 HECTD4Q9Y4D8 3996 aa4.32□□□□□ -1.72
VPS11-209ENST00000622309 COX6B2Q6YFQ2 88 aa4.32□□□□□ -1.72
VPS11-209ENST00000622309 CAMK2N1Q7Z7J9 78 aa4.3□□□□□ -1.72
VPS11-209ENST00000622309 DNAH6Q9C0G6 4158 aa4.29□□□□□ -1.72
VPS11-209ENST00000622309 RYR1P21817 5038 aa4.28□□□□□ -1.72
VPS11-209ENST00000622309 A0A0D9SG42 100 aa4.28□□□□□ -1.72
VPS11-209ENST00000622309 DNAH17Q9UFH2 4485 aa4.27□□□□□ -1.73
VPS11-209ENST00000622309 DNAH8Q96JB1 4490 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms