RNA–Protein interactions for RNA: ENST00000621016.4

CDH1-214, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-214ENST00000621016 PLECQ15149 4684 aaKnown RBP6.5□□□□□ -1.37
CDH1-214ENST00000621016 A0A1B0GW54 56 aa6.5□□□□□ -1.37
CDH1-214ENST00000621016 IGHV6-1A0A0B4J1U7 121 aa6.48□□□□□ -1.37
CDH1-214ENST00000621016 RTL8CO15255 209 aa6.48□□□□□ -1.37
CDH1-214ENST00000621016 DMBT1Q9UGM3 2413 aaPredicted RBP6.48□□□□□ -1.37
CDH1-214ENST00000621016 DNAH1Q9P2D7 4330 aa6.48□□□□□ -1.37
CDH1-214ENST00000621016 PLAC8Q9NZF1 115 aa6.47□□□□□ -1.37
CDH1-214ENST00000621016 A8MWP4 228 aa6.45□□□□□ -1.38
CDH1-214ENST00000621016 KRTAP29-1A8MX34 341 aaPredicted RBP6.45□□□□□ -1.38
CDH1-214ENST00000621016 MIR22HGQ0VDD5 57 aa6.45□□□□□ -1.38
CDH1-214ENST00000621016 LINC00472Q9H8W2 130 aa6.44□□□□□ -1.38
CDH1-214ENST00000621016 ROMO1P60602 79 aa6.44□□□□□ -1.38
CDH1-214ENST00000621016 PSORS1C2Q9UIG4 136 aa6.44□□□□□ -1.38
CDH1-214ENST00000621016 A0A1B0GU69 56 aa6.43□□□□□ -1.38
CDH1-214ENST00000621016 NUPR2A6NF83 97 aa6.43□□□□□ -1.38
CDH1-214ENST00000621016 CDK2AP2O75956 126 aa6.43□□□□□ -1.38
CDH1-214ENST00000621016 A0A087WTM6 91 aa6.42□□□□□ -1.38
CDH1-214ENST00000621016 LY6G6CO95867 125 aa6.42□□□□□ -1.38
CDH1-214ENST00000621016 CIRBP-AS1Q8TBR5 109 aa6.42□□□□□ -1.38
CDH1-214ENST00000621016 Q6ZRN7 208 aaPredicted RBP6.41□□□□□ -1.38
CDH1-214ENST00000621016 KMT2AQ03164 3969 aa6.41□□□□□ -1.38
CDH1-214ENST00000621016 FRAS1Q86XX4 4008 aa6.4□□□□□ -1.38
CDH1-214ENST00000621016 H3BPC8 53 aa6.4□□□□□ -1.38
CDH1-214ENST00000621016 STARD9Q9P2P6 4700 aa6.4□□□□□ -1.39
CDH1-214ENST00000621016 A0A087X002 238 aa6.4□□□□□ -1.39
CDH1-214ENST00000621016 NOTCH2NLQ7Z3S9 236 aa6.4□□□□□ -1.39
CDH1-214ENST00000621016 SPACA4Q8TDM5 124 aa6.4□□□□□ -1.39
CDH1-214ENST00000621016 IGLV5-52A0A0A0MRZ9 124 aa6.39□□□□□ -1.39
CDH1-214ENST00000621016 PRKDCP78527 4128 aaKnown RBP6.38□□□□□ -1.39
CDH1-214ENST00000621016 MMP24-AS1A0A0U1RRL7 71 aa6.38□□□□□ -1.39
CDH1-214ENST00000621016 SPRR1BP22528 89 aa6.37□□□□□ -1.39
CDH1-214ENST00000621016 P0C880 135 aa6.35□□□□□ -1.39
CDH1-214ENST00000621016 KRTAP13-1Q8IUC0 172 aa6.35□□□□□ -1.39
CDH1-214ENST00000621016 C8orf17Q9NRJ1 99 aa6.34□□□□□ -1.39
CDH1-214ENST00000621016 WWC2-AS2Q96NR7 200 aa6.33□□□□□ -1.4
CDH1-214ENST00000621016 ZNF861PO60384 105 aa6.32□□□□□ -1.4
CDH1-214ENST00000621016 Q96NJ1 140 aa6.32□□□□□ -1.4
CDH1-214ENST00000621016 UQCR11O14957 56 aa6.32□□□□□ -1.4
CDH1-214ENST00000621016 SPATA8Q6RVD6 105 aa6.31□□□□□ -1.4
CDH1-214ENST00000621016 A0A1B0GVX0 72 aa6.3□□□□□ -1.4
CDH1-214ENST00000621016 DNHD1Q96M86 4753 aa6.3□□□□□ -1.4
CDH1-214ENST00000621016 NDUFAF8A1L188 74 aa6.27□□□□□ -1.41
CDH1-214ENST00000621016 KRTAP10-2P60368 255 aa6.27□□□□□ -1.41
CDH1-214ENST00000621016 SPINK1P00995 79 aa6.27□□□□□ -1.41
CDH1-214ENST00000621016 MRPL34Q9BQ48 92 aaKnown RBP6.27□□□□□ -1.41
CDH1-214ENST00000621016 DNAH2Q9P225 4427 aa6.26□□□□□ -1.41
CDH1-214ENST00000621016 IGLV7-43P04211 117 aa6.25□□□□□ -1.41
CDH1-214ENST00000621016 KRTAP25-1Q3LHN0 102 aa6.25□□□□□ -1.41
CDH1-214ENST00000621016 A8MUU9 505 aa6.25□□□□□ -1.41
CDH1-214ENST00000621016 DNAH6Q9C0G6 4158 aa6.25□□□□□ -1.41
CDH1-214ENST00000621016 VPS13DQ5THJ4 4388 aa6.25□□□□□ -1.41
CDH1-214ENST00000621016 Q5W150 140 aa6.25□□□□□ -1.41
CDH1-214ENST00000621016 SSBP3-AS1Q7Z2R9 100 aa6.25□□□□□ -1.41
CDH1-214ENST00000621016 DNAH8Q96JB1 4490 aa6.25□□□□□ -1.41
CDH1-214ENST00000621016 HECTD4Q9Y4D8 3996 aa6.24□□□□□ -1.41
CDH1-214ENST00000621016 ACYP2P14621 99 aa6.24□□□□□ -1.41
CDH1-214ENST00000621016 LINC00483Q53H64 154 aa6.23□□□□□ -1.41
CDH1-214ENST00000621016 SPINT4Q6UDR6 99 aa6.23□□□□□ -1.41
CDH1-214ENST00000621016 DNAH17Q9UFH2 4485 aa6.23□□□□□ -1.41
CDH1-214ENST00000621016 TP53AIP1Q9HCN2 124 aa6.22□□□□□ -1.41
CDH1-214ENST00000621016 DNAH11Q96DT5 4516 aa6.22□□□□□ -1.41
CDH1-214ENST00000621016 ASB16-AS1Q495Z4 193 aa6.21□□□□□ -1.41
CDH1-214ENST00000621016 KRTAP10-1P60331 282 aa6.16□□□□□ -1.42
CDH1-214ENST00000621016 IGKV2D-30A0A075B6S6 120 aa6.15□□□□□ -1.42
CDH1-214ENST00000621016 IGKV2-30P06310 120 aa6.15□□□□□ -1.42
CDH1-214ENST00000621016 KRTAP16-1A8MUX0 517 aa6.14□□□□□ -1.43
CDH1-214ENST00000621016 DYNC2H1Q8NCM8 4307 aaKnown RBP6.13□□□□□ -1.43
CDH1-214ENST00000621016 LRP1BQ9NZR2 4599 aa6.13□□□□□ -1.43
CDH1-214ENST00000621016 LINC00304Q8N9R0 145 aa6.13□□□□□ -1.43
CDH1-214ENST00000621016 SMR3BP02814 79 aaPredicted RBP6.12□□□□□ -1.43
CDH1-214ENST00000621016 KRTAP13-2Q52LG2 175 aa6.12□□□□□ -1.43
CDH1-214ENST00000621016 DMAC1Q96GE9 116 aa6.11□□□□□ -1.43
CDH1-214ENST00000621016 HYDINQ4G0P3 5121 aa6.07□□□□□ -1.44
CDH1-214ENST00000621016 C20orf166-AS1Q96NR2 134 aa6.07□□□□□ -1.44
CDH1-214ENST00000621016 TYMSOSQ8TAI1 123 aa6.05□□□□□ -1.44
CDH1-214ENST00000621016 DNAH5Q8TE73 4624 aa6.04□□□□□ -1.44
CDH1-214ENST00000621016 ALMS1Q8TCU4 4167 aa6.03□□□□□ -1.44
CDH1-214ENST00000621016 FAM229AH3BQW9 127 aa6.02□□□□□ -1.45
CDH1-214ENST00000621016 C9orf92A6NGG3 77 aa6.01□□□□□ -1.45
CDH1-214ENST00000621016 Q8N1X5 172 aa6.01□□□□□ -1.45
CDH1-214ENST00000621016 VPS13BQ7Z7G8 4022 aa6.01□□□□□ -1.45
CDH1-214ENST00000621016 KRTAP13-3Q3SY46 172 aa6□□□□□ -1.45
CDH1-214ENST00000621016 FAT2Q9NYQ8 4349 aa6□□□□□ -1.45
CDH1-214ENST00000621016 PKHD1P08F94 4074 aa6□□□□□ -1.45
CDH1-214ENST00000621016 H0YAA0 97 aa6□□□□□ -1.45
CDH1-214ENST00000621016 C10orf95Q9H7T3 257 aa5.99□□□□□ -1.45
CDH1-214ENST00000621016 KRTAP1-4P0C5Y4 121 aa5.99□□□□□ -1.45
CDH1-214ENST00000621016 Q6ZSA8 131 aa5.96□□□□□ -1.45
CDH1-214ENST00000621016 LUZP6Q538Z0 58 aa5.95□□□□□ -1.46
CDH1-214ENST00000621016 FAT1Q14517 4588 aa5.94□□□□□ -1.46
CDH1-214ENST00000621016 PKD1P98161 4303 aa5.89□□□□□ -1.47
CDH1-214ENST00000621016 A0A1B0GU33 70 aa5.87□□□□□ -1.47
CDH1-214ENST00000621016 TPRXLQ17RH7 258 aa5.87□□□□□ -1.47
CDH1-214ENST00000621016 K7ERS5 55 aa5.85□□□□□ -1.47
CDH1-214ENST00000621016 A0A0D9SG42 100 aa5.84□□□□□ -1.47
CDH1-214ENST00000621016 KRTAP15-1Q3LI76 137 aa5.81□□□□□ -1.48
CDH1-214ENST00000621016 DYNC1H1Q14204 4646 aaKnown RBP5.78□□□□□ -1.48
CDH1-214ENST00000621016 MYCBP2O75592 4640 aa5.75□□□□□ -1.49
CDH1-214ENST00000621016 H1FX-AS1Q4G0G2 97 aa5.74□□□□□ -1.49
CDH1-214ENST00000621016 SACSQ9NZJ4 4579 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 159.1 ms