RNA–Protein interactions for RNA: ENST00000620197.4

SKP2-209, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 2 BASIC

Gene SKP2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-209ENST00000620197 PCOTHQ58A44 107 aa7.76□□□□□ -1.17
SKP2-209ENST00000620197 MDFIQ99750 246 aa7.76□□□□□ -1.17
SKP2-209ENST00000620197 LINC01558Q9Y6Z2 57 aa7.76□□□□□ -1.17
SKP2-209ENST00000620197 A0A087X002 238 aa7.75□□□□□ -1.17
SKP2-209ENST00000620197 A6NN06 94 aa7.75□□□□□ -1.17
SKP2-209ENST00000620197 NOTCH2NLQ7Z3S9 236 aa7.75□□□□□ -1.17
SKP2-209ENST00000620197 IGLV9-49A0A0B4J1Y8 123 aa7.74□□□□□ -1.17
SKP2-209ENST00000620197 ATP11AUNQ6ZP68 121 aa7.74□□□□□ -1.17
SKP2-209ENST00000620197 ZNF706Q9Y5V0 76 aaPredicted RBP7.74□□□□□ -1.17
SKP2-209ENST00000620197 A0A0A0MQY5 61 aa7.73□□□□□ -1.17
SKP2-209ENST00000620197 MRPL34Q9BQ48 92 aaKnown RBP7.73□□□□□ -1.17
SKP2-209ENST00000620197 KTN1-AS1Q86SY8 53 aa7.73□□□□□ -1.17
SKP2-209ENST00000620197 PSORS1C2Q9UIG4 136 aa7.72□□□□□ -1.17
SKP2-209ENST00000620197 H3BS24 57 aa7.72□□□□□ -1.17
SKP2-209ENST00000620197 HRES1P13985 223 aa7.72□□□□□ -1.17
SKP2-209ENST00000620197 CDC42SE1Q9NRR8 79 aa7.72□□□□□ -1.17
SKP2-209ENST00000620197 A0A087WTM6 91 aa7.71□□□□□ -1.17
SKP2-209ENST00000620197 A6NED7 52 aa7.71□□□□□ -1.18
SKP2-209ENST00000620197 DNAH5Q8TE73 4624 aa7.7□□□□□ -1.18
SKP2-209ENST00000620197 DNAH11Q96DT5 4516 aa7.7□□□□□ -1.18
SKP2-209ENST00000620197 NUPR2A6NF83 97 aa7.7□□□□□ -1.18
SKP2-209ENST00000620197 ZNF861PO60384 105 aa7.69□□□□□ -1.18
SKP2-209ENST00000620197 SPAG11AQ6PDA7 123 aa7.69□□□□□ -1.18
SKP2-209ENST00000620197 IGHV6-1A0A0B4J1U7 121 aa7.69□□□□□ -1.18
SKP2-209ENST00000620197 SPTSSBQ8NFR3 76 aa7.69□□□□□ -1.18
SKP2-209ENST00000620197 PKD1P98161 4303 aa7.68□□□□□ -1.18
SKP2-209ENST00000620197 Q5W150 140 aa7.67□□□□□ -1.18
SKP2-209ENST00000620197 SPINK7P58062 85 aa7.66□□□□□ -1.18
SKP2-209ENST00000620197 RTL8CO15255 209 aa7.64□□□□□ -1.19
SKP2-209ENST00000620197 ANAPC11Q9NYG5 84 aa7.64□□□□□ -1.19
SKP2-209ENST00000620197 RBM12B-AS1Q9P1G2 102 aa7.63□□□□□ -1.19
SKP2-209ENST00000620197 NDUFS5O43920 106 aa7.6□□□□□ -1.19
SKP2-209ENST00000620197 MEGF8Q7Z7M0 2845 aa7.6□□□□□ -1.19
SKP2-209ENST00000620197 IGLV7-43P04211 117 aa7.58□□□□□ -1.2
SKP2-209ENST00000620197 CDK2AP2O75956 126 aa7.57□□□□□ -1.2
SKP2-209ENST00000620197 PRR26Q8N8Z3 221 aa7.56□□□□□ -1.2
SKP2-209ENST00000620197 FAT2Q9NYQ8 4349 aa7.56□□□□□ -1.2
SKP2-209ENST00000620197 C8orf87E5RJ46 101 aa7.56□□□□□ -1.2
SKP2-209ENST00000620197 DMAC1Q96GE9 116 aa7.56□□□□□ -1.2
SKP2-209ENST00000620197 TGP01266 2768 aa7.55□□□□□ -1.2
SKP2-209ENST00000620197 C7orf65Q6ZTY9 151 aa7.55□□□□□ -1.2
SKP2-209ENST00000620197 KRTAP16-1A8MUX0 517 aa7.54□□□□□ -1.2
SKP2-209ENST00000620197 SSBP3-AS1Q7Z2R9 100 aa7.54□□□□□ -1.2
SKP2-209ENST00000620197 LRP1BQ9NZR2 4599 aa7.51□□□□□ -1.21
SKP2-209ENST00000620197 VPS13BQ7Z7G8 4022 aa7.49□□□□□ -1.21
SKP2-209ENST00000620197 ACYP2P14621 99 aa7.49□□□□□ -1.21
SKP2-209ENST00000620197 KRTAP13-2Q52LG2 175 aa7.48□□□□□ -1.21
SKP2-209ENST00000620197 IGKV2-30P06310 120 aa7.48□□□□□ -1.21
SKP2-209ENST00000620197 SPINK6Q6UWN8 80 aa7.48□□□□□ -1.21
SKP2-209ENST00000620197 CIRBP-AS1Q8TBR5 109 aa7.46□□□□□ -1.22
SKP2-209ENST00000620197 FAM229AH3BQW9 127 aa7.45□□□□□ -1.22
SKP2-209ENST00000620197 Q6ZSA8 131 aa7.45□□□□□ -1.22
SKP2-209ENST00000620197 HYDINQ4G0P3 5121 aa7.44□□□□□ -1.22
SKP2-209ENST00000620197 LINC00313P59037 77 aa7.43□□□□□ -1.22
SKP2-209ENST00000620197 RETNLBQ9BQ08 111 aa7.42□□□□□ -1.22
SKP2-209ENST00000620197 KRTAP1-4P0C5Y4 121 aa7.41□□□□□ -1.22
SKP2-209ENST00000620197 C1orf134Q5TEV5 83 aa7.41□□□□□ -1.22
SKP2-209ENST00000620197 SACSQ9NZJ4 4579 aa7.4□□□□□ -1.22
SKP2-209ENST00000620197 KRTAP10-2P60368 255 aa7.38□□□□□ -1.23
SKP2-209ENST00000620197 PLA2G1BP04054 148 aaKnown RBP7.38□□□□□ -1.23
SKP2-209ENST00000620197 SPATA8Q6RVD6 105 aa7.38□□□□□ -1.23
SKP2-209ENST00000620197 ADM2Q7Z4H4 148 aa7.36□□□□□ -1.23
SKP2-209ENST00000620197 PKHD1L1Q86WI1 4243 aa7.36□□□□□ -1.23
SKP2-209ENST00000620197 PRAC1Q96KF2 57 aa7.36□□□□□ -1.23
SKP2-209ENST00000620197 A0A1B0GU69 56 aa7.33□□□□□ -1.24
SKP2-209ENST00000620197 DNHD1Q96M86 4753 aa7.33□□□□□ -1.24
SKP2-209ENST00000620197 IGKV2D-30A0A075B6S6 120 aa7.31□□□□□ -1.24
SKP2-209ENST00000620197 KRTAP10-1P60331 282 aa7.3□□□□□ -1.24
SKP2-209ENST00000620197 PKHD1P08F94 4074 aa7.27□□□□□ -1.25
SKP2-209ENST00000620197 MIR22HGQ0VDD5 57 aa7.26□□□□□ -1.25
SKP2-209ENST00000620197 UQCR11O14957 56 aa7.24□□□□□ -1.25
SKP2-209ENST00000620197 APOBP04114 4563 aaKnown RBP7.23□□□□□ -1.25
SKP2-209ENST00000620197 RPS29P62273 56 aaKnown RBP7.23□□□□□ -1.25
SKP2-209ENST00000620197 LY6G6CO95867 125 aa7.21□□□□□ -1.26
SKP2-209ENST00000620197 SPINK1P00995 79 aa7.2□□□□□ -1.26
SKP2-209ENST00000620197 LINC01554Q52M75 96 aa7.18□□□□□ -1.26
SKP2-209ENST00000620197 KRTAP3-3Q9BYR6 98 aa7.14□□□□□ -1.27
SKP2-209ENST00000620197 KRTAP3-2Q9BYR7 98 aa7.14□□□□□ -1.27
SKP2-209ENST00000620197 TYMSOSQ8TAI1 123 aa7.12□□□□□ -1.27
SKP2-209ENST00000620197 C20orf166-AS1Q96NR2 134 aa7.11□□□□□ -1.27
SKP2-209ENST00000620197 A8MUU9 505 aa7.1□□□□□ -1.27
SKP2-209ENST00000620197 KRTAP3-1Q9BYR8 98 aa7.1□□□□□ -1.27
SKP2-209ENST00000620197 CSAG1Q6PB30 78 aa7.1□□□□□ -1.27
SKP2-209ENST00000620197 DYNC1H1Q14204 4646 aaKnown RBP7.07□□□□□ -1.28
SKP2-209ENST00000620197 Q8N1X5 172 aa7.07□□□□□ -1.28
SKP2-209ENST00000620197 KRTAP10-4P60372 401 aaPredicted RBP7.06□□□□□ -1.28
SKP2-209ENST00000620197 H0YAA0 97 aa7.06□□□□□ -1.28
SKP2-209ENST00000620197 LINC00304Q8N9R0 145 aa7.05□□□□□ -1.28
SKP2-209ENST00000620197 FLG2Q5D862 2391 aaPredicted RBP7.05□□□□□ -1.28
SKP2-209ENST00000620197 DMBT1Q9UGM3 2413 aaPredicted RBP7.05□□□□□ -1.28
SKP2-209ENST00000620197 TNXBP22105 4242 aa7.02□□□□□ -1.29
SKP2-209ENST00000620197 HSPG2P98160 4391 aa6.97□□□□□ -1.29
SKP2-209ENST00000620197 FAT1Q14517 4588 aa6.94□□□□□ -1.3
SKP2-209ENST00000620197 SEC61BP60468 96 aaKnown RBP6.94□□□□□ -1.3
SKP2-209ENST00000620197 FAT3Q8TDW7 4589 aa6.94□□□□□ -1.3
SKP2-209ENST00000620197 A0A1B0GVY2 172 aa6.92□□□□□ -1.3
SKP2-209ENST00000620197 H1FX-AS1Q4G0G2 97 aa6.91□□□□□ -1.3
SKP2-209ENST00000620197 KRTAP25-1Q3LHN0 102 aa6.89□□□□□ -1.31
SKP2-209ENST00000620197 A0A1B0GU33 70 aa6.89□□□□□ -1.31
SKP2-209ENST00000620197 C9orf92A6NGG3 77 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 960.2 ms