RNA–Protein interactions for RNA: ENST00000619438.4

SGMS1-210, Transcript of sphingomyelin synthase 1, humanhuman

TSL 5 BASIC

Gene SGMS1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-210ENST00000619438 KRTAP10-8P60410 259 aa12.7□□□□□ -0.38
SGMS1-210ENST00000619438 A8MWP4 228 aa12.7□□□□□ -0.38
SGMS1-210ENST00000619438 SNURFQ9Y675 71 aa12.7□□□□□ -0.38
SGMS1-210ENST00000619438 PRR15Q8IV56 129 aa12.69□□□□□ -0.38
SGMS1-210ENST00000619438 TNXBP22105 4242 aa12.68□□□□□ -0.38
SGMS1-210ENST00000619438 A0A0U1RQV1 116 aa12.67□□□□□ -0.38
SGMS1-210ENST00000619438 PRR26Q8N8Z3 221 aa12.65□□□□□ -0.38
SGMS1-210ENST00000619438 MOBPQ13875 183 aa12.64□□□□□ -0.39
SGMS1-210ENST00000619438 HMCN2Q8NDA2 5059 aa12.64□□□□□ -0.39
SGMS1-210ENST00000619438 FAM236DA0A1B0GTK5 79 aa12.63□□□□□ -0.39
SGMS1-210ENST00000619438 FAM236CP0DP71 79 aa12.63□□□□□ -0.39
SGMS1-210ENST00000619438 Q96NJ1 140 aa12.62□□□□□ -0.39
SGMS1-210ENST00000619438 KRTAP1-4P0C5Y4 121 aa12.61□□□□□ -0.39
SGMS1-210ENST00000619438 C5orf47Q569G3 176 aa12.59□□□□□ -0.39
SGMS1-210ENST00000619438 ANAPC11Q9NYG5 84 aa12.59□□□□□ -0.39
SGMS1-210ENST00000619438 WFDC13Q8IUB5 93 aa12.57□□□□□ -0.4
SGMS1-210ENST00000619438 NDUFB1O75438 58 aa12.57□□□□□ -0.4
SGMS1-210ENST00000619438 ATP5EP56381 51 aaPredicted RBP12.57□□□□□ -0.4
SGMS1-210ENST00000619438 CASC2Q6XLA1 102 aa12.57□□□□□ -0.4
SGMS1-210ENST00000619438 CD164Q04900 197 aa12.54□□□□□ -0.4
SGMS1-210ENST00000619438 SSBP3-AS1Q7Z2R9 100 aa12.54□□□□□ -0.4
SGMS1-210ENST00000619438 HRCT1Q6UXD1 115 aa12.53□□□□□ -0.4
SGMS1-210ENST00000619438 ZCCHC13Q8WW36 166 aaKnown RBP12.53□□□□□ -0.4
SGMS1-210ENST00000619438 MMP24-AS1A0A0U1RRL7 71 aa12.51□□□□□ -0.41
SGMS1-210ENST00000619438 ASB16-AS1Q495Z4 193 aa12.49□□□□□ -0.41
SGMS1-210ENST00000619438 SERP1Q9Y6X1 66 aa12.49□□□□□ -0.41
SGMS1-210ENST00000619438 A0A087X002 238 aa12.46□□□□□ -0.41
SGMS1-210ENST00000619438 FAM229BQ4G0N7 80 aa12.46□□□□□ -0.41
SGMS1-210ENST00000619438 TYMSOSQ8TAI1 123 aa12.45□□□□□ -0.42
SGMS1-210ENST00000619438 hDV103S1A0JD37 113 aa12.45□□□□□ -0.42
SGMS1-210ENST00000619438 A0A1B0GVX0 72 aa12.44□□□□□ -0.42
SGMS1-210ENST00000619438 H3BPC8 53 aa12.43□□□□□ -0.42
SGMS1-210ENST00000619438 MP68P56378 58 aa12.43□□□□□ -0.42
SGMS1-210ENST00000619438 C8orf17Q9NRJ1 99 aa12.42□□□□□ -0.42
SGMS1-210ENST00000619438 UBR4Q5T4S7 5183 aa12.42□□□□□ -0.42
SGMS1-210ENST00000619438 TP53AIP1Q9HCN2 124 aa12.37□□□□□ -0.43
SGMS1-210ENST00000619438 KRTAP13-2Q52LG2 175 aa12.36□□□□□ -0.43
SGMS1-210ENST00000619438 Q5XG85 94 aa12.35□□□□□ -0.43
SGMS1-210ENST00000619438 H0Y9P7 68 aa12.35□□□□□ -0.43
SGMS1-210ENST00000619438 IGHV6-1A0A0B4J1U7 121 aa12.34□□□□□ -0.43
SGMS1-210ENST00000619438 LRP2P98164 4655 aa12.32□□□□□ -0.44
SGMS1-210ENST00000619438 TRAV22A0A0B4J277 110 aa12.32□□□□□ -0.44
SGMS1-210ENST00000619438 LINC00208Q96KT6 92 aa12.32□□□□□ -0.44
SGMS1-210ENST00000619438 LINC00304Q8N9R0 145 aa12.29□□□□□ -0.44
SGMS1-210ENST00000619438 MRPL34Q9BQ48 92 aaKnown RBP12.29□□□□□ -0.44
SGMS1-210ENST00000619438 PRR4Q16378 134 aa12.26□□□□□ -0.45
SGMS1-210ENST00000619438 CYP4F30PQ9H0H9 118 aa12.25□□□□□ -0.45
SGMS1-210ENST00000619438 C8orf87E5RJ46 101 aa12.24□□□□□ -0.45
SGMS1-210ENST00000619438 C1orf64Q8NEQ6 169 aa12.24□□□□□ -0.45
SGMS1-210ENST00000619438 SMIM26A0A096LP01 95 aa12.23□□□□□ -0.45
SGMS1-210ENST00000619438 NOTCH2NLQ7Z3S9 236 aa12.23□□□□□ -0.45
SGMS1-210ENST00000619438 SPANXA2-OT1Q8N9U9 137 aa12.22□□□□□ -0.45
SGMS1-210ENST00000619438 C4orf48Q5BLP8 95 aa12.21□□□□□ -0.45
SGMS1-210ENST00000619438 LIMD2Q9BT23 127 aa12.19□□□□□ -0.46
SGMS1-210ENST00000619438 C1orf195Q5TG92 126 aa12.19□□□□□ -0.46
SGMS1-210ENST00000619438 SPAG11AQ6PDA7 123 aa12.18□□□□□ -0.46
SGMS1-210ENST00000619438 LPAP08519 4548 aa12.17□□□□□ -0.46
SGMS1-210ENST00000619438 NDUFS5O43920 106 aa12.16□□□□□ -0.46
SGMS1-210ENST00000619438 RETNLBQ9BQ08 111 aa12.12□□□□□ -0.47
SGMS1-210ENST00000619438 SPINK1P00995 79 aa12.11□□□□□ -0.47
SGMS1-210ENST00000619438 FP248Q71RG6 208 aaPredicted RBP12.11□□□□□ -0.47
SGMS1-210ENST00000619438 RNF213Q63HN8 5207 aa12.11□□□□□ -0.47
SGMS1-210ENST00000619438 LINC00313P59037 77 aa12.1□□□□□ -0.47
SGMS1-210ENST00000619438 RPS29P62273 56 aaKnown RBP12.07□□□□□ -0.48
SGMS1-210ENST00000619438 KRTAP13-3Q3SY46 172 aa12.06□□□□□ -0.48
SGMS1-210ENST00000619438 C4orf26Q17RF5 130 aa12.05□□□□□ -0.48
SGMS1-210ENST00000619438 IGLV7-46A0A075B6I9 117 aa12.04□□□□□ -0.48
SGMS1-210ENST00000619438 Q8N9P0 234 aaPredicted RBP12.04□□□□□ -0.48
SGMS1-210ENST00000619438 LOC101927531A0A1B0GV80 90 aa12.02□□□□□ -0.49
SGMS1-210ENST00000619438 Q5W150 140 aa12□□□□□ -0.49
SGMS1-210ENST00000619438 KRTAP16-1A8MUX0 517 aa11.99□□□□□ -0.49
SGMS1-210ENST00000619438 PCOTHQ58A44 107 aa11.95□□□□□ -0.5
SGMS1-210ENST00000619438 TPRXLQ17RH7 258 aa11.9□□□□□ -0.5
SGMS1-210ENST00000619438 Q1T7F1 81 aa11.89□□□□□ -0.51
SGMS1-210ENST00000619438 MPLKIPQ8TAP9 179 aa11.87□□□□□ -0.51
SGMS1-210ENST00000619438 SVIPQ8NHG7 77 aa11.84□□□□□ -0.51
SGMS1-210ENST00000619438 COA5Q86WW8 74 aa11.81□□□□□ -0.52
SGMS1-210ENST00000619438 IGKV2-30P06310 120 aa11.81□□□□□ -0.52
SGMS1-210ENST00000619438 V9GYY9 64 aa11.8□□□□□ -0.52
SGMS1-210ENST00000619438 MUC2Q02817 5179 aa11.77□□□□□ -0.52
SGMS1-210ENST00000619438 HRES1P13985 223 aa11.71□□□□□ -0.53
SGMS1-210ENST00000619438 DMAC1Q96GE9 116 aa11.66□□□□□ -0.54
SGMS1-210ENST00000619438 ACYP2P14621 99 aa11.65□□□□□ -0.55
SGMS1-210ENST00000619438 C20orf166-AS1Q96NR2 134 aa11.62□□□□□ -0.55
SGMS1-210ENST00000619438 A8MUU9 505 aa11.6□□□□□ -0.55
SGMS1-210ENST00000619438 IGKV2D-30A0A075B6S6 120 aa11.58□□□□□ -0.56
SGMS1-210ENST00000619438 C9orf92A6NGG3 77 aa11.58□□□□□ -0.56
SGMS1-210ENST00000619438 PSPHP1O15172 72 aa11.57□□□□□ -0.56
SGMS1-210ENST00000619438 SEC61BP60468 96 aaKnown RBP11.57□□□□□ -0.56
SGMS1-210ENST00000619438 A8MUN3 132 aa11.55□□□□□ -0.56
SGMS1-210ENST00000619438 XP32Q5T750 250 aa11.55□□□□□ -0.56
SGMS1-210ENST00000619438 PRO0628Q9UI54 55 aa11.55□□□□□ -0.56
SGMS1-210ENST00000619438 MUC17Q685J3 4493 aa11.54□□□□□ -0.56
SGMS1-210ENST00000619438 C7orf65Q6ZTY9 151 aa11.54□□□□□ -0.56
SGMS1-210ENST00000619438 LINC01558Q9Y6Z2 57 aa11.54□□□□□ -0.56
SGMS1-210ENST00000619438 Q5VV11 94 aa11.52□□□□□ -0.56
SGMS1-210ENST00000619438 BRK1Q8WUW1 75 aa11.49□□□□□ -0.57
SGMS1-210ENST00000619438 PRR15LQ9BU68 103 aa11.48□□□□□ -0.57
SGMS1-210ENST00000619438 Q75L30 129 aa11.45□□□□□ -0.58
SGMS1-210ENST00000619438 CHKB-CPT1BH3BT56 60 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms