RNA–Protein interactions for RNA: ENST00000617546.4

CUL4A-212, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 5,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-212ENST00000617546 P0C880 135 aa5.51□□□□□ -1.53
CUL4A-212ENST00000617546 SETXQ7Z333 2677 aaKnown RBP5.5□□□□□ -1.53
CUL4A-212ENST00000617546 GCN1Q92616 2671 aaKnown RBP5.5□□□□□ -1.53
CUL4A-212ENST00000617546 KMT2BQ9UMN6 2715 aaPredicted RBP5.49□□□□□ -1.53
CUL4A-212ENST00000617546 CELSR3Q9NYQ7 3312 aa5.48□□□□□ -1.53
CUL4A-212ENST00000617546 TNP1P09430 55 aa5.47□□□□□ -1.53
CUL4A-212ENST00000617546 M0R2T5 61 aa5.47□□□□□ -1.53
CUL4A-212ENST00000617546 KRTAP1-4P0C5Y4 121 aa5.46□□□□□ -1.53
CUL4A-212ENST00000617546 LAMA5O15230 3695 aa5.45□□□□□ -1.54
CUL4A-212ENST00000617546 ITPR2Q14571 2701 aa5.44□□□□□ -1.54
CUL4A-212ENST00000617546 CFAP47Q6ZTR5 3102 aa5.43□□□□□ -1.54
CUL4A-212ENST00000617546 FLNCQ14315 2725 aa5.43□□□□□ -1.54
CUL4A-212ENST00000617546 NOTCH1P46531 2555 aa5.41□□□□□ -1.54
CUL4A-212ENST00000617546 C10orf95Q9H7T3 257 aa5.41□□□□□ -1.54
CUL4A-212ENST00000617546 FRYQ5TBA9 3013 aa5.38□□□□□ -1.55
CUL4A-212ENST00000617546 NSD1Q96L73 2696 aaPredicted RBP5.37□□□□□ -1.55
CUL4A-212ENST00000617546 DMBT1Q9UGM3 2413 aaPredicted RBP5.37□□□□□ -1.55
CUL4A-212ENST00000617546 FREM2Q5SZK8 3169 aa5.36□□□□□ -1.55
CUL4A-212ENST00000617546 UBR5O95071 2799 aaPredicted RBP5.36□□□□□ -1.55
CUL4A-212ENST00000617546 NBEAL1Q6ZS30 2694 aa5.36□□□□□ -1.55
CUL4A-212ENST00000617546 HIVEP1P15822 2718 aa5.35□□□□□ -1.55
CUL4A-212ENST00000617546 ITPR1Q14643 2758 aa5.34□□□□□ -1.55
CUL4A-212ENST00000617546 LOC400499M0QZD8 3231 aa5.34□□□□□ -1.56
CUL4A-212ENST00000617546 NBEAQ8NFP9 2946 aa5.33□□□□□ -1.56
CUL4A-212ENST00000617546 NBEAL2Q6ZNJ1 2754 aa5.33□□□□□ -1.56
CUL4A-212ENST00000617546 ZZEF1O43149 2961 aa5.32□□□□□ -1.56
CUL4A-212ENST00000617546 SMG1Q96Q15 3661 aaKnown RBP5.31□□□□□ -1.56
CUL4A-212ENST00000617546 XP32Q5T750 250 aa5.31□□□□□ -1.56
CUL4A-212ENST00000617546 APCP25054 2843 aa5.31□□□□□ -1.56
CUL4A-212ENST00000617546 UTP20O75691 2785 aaKnown RBP5.3□□□□□ -1.56
CUL4A-212ENST00000617546 MAP1AP78559 2803 aaPredicted RBP5.28□□□□□ -1.56
CUL4A-212ENST00000617546 DMXL2Q8TDJ6 3036 aa5.28□□□□□ -1.56
CUL4A-212ENST00000617546 ATMQ13315 3056 aa5.28□□□□□ -1.56
CUL4A-212ENST00000617546 COL12A1Q99715 3063 aa5.26□□□□□ -1.57
CUL4A-212ENST00000617546 TPRXLQ17RH7 258 aa5.21□□□□□ -1.58
CUL4A-212ENST00000617546 KALRNO60229 2985 aa5.2□□□□□ -1.58
CUL4A-212ENST00000617546 KRTAP10-8P60410 259 aa5.19□□□□□ -1.58
CUL4A-212ENST00000617546 STAB2Q8WWQ8 2551 aa5.19□□□□□ -1.58
CUL4A-212ENST00000617546 FLG2Q5D862 2391 aaPredicted RBP5.18□□□□□ -1.58
CUL4A-212ENST00000617546 NIPBLQ6KC79 2804 aaeCLIP5.17□□□□□ -1.58
CUL4A-212ENST00000617546 BOD1L1Q8NFC6 3051 aa5.16□□□□□ -1.58
CUL4A-212ENST00000617546 ADGRG4Q8IZF6 3080 aa5.16□□□□□ -1.58
CUL4A-212ENST00000617546 KRTAP12-2P59991 146 aa5.16□□□□□ -1.58
CUL4A-212ENST00000617546 TENM4Q6N022 2769 aa5.16□□□□□ -1.58
CUL4A-212ENST00000617546 TACC2O95359 2948 aa5.15□□□□□ -1.59
CUL4A-212ENST00000617546 LRBAP50851 2863 aa5.14□□□□□ -1.59
CUL4A-212ENST00000617546 NBPF19A0A087WUL8 3843 aa5.14□□□□□ -1.59
CUL4A-212ENST00000617546 KRTAP13-4Q3LI77 160 aa5.13□□□□□ -1.59
CUL4A-212ENST00000617546 KRTAP12-1P59990 96 aa5.13□□□□□ -1.59
CUL4A-212ENST00000617546 KRTAP3-1Q9BYR8 98 aa5.1□□□□□ -1.59
CUL4A-212ENST00000617546 RELNP78509 3460 aa5.09□□□□□ -1.59
CUL4A-212ENST00000617546 HRNRQ86YZ3 2850 aaPredicted RBP5.08□□□□□ -1.6
CUL4A-212ENST00000617546 AKAP9Q99996 3911 aa5.07□□□□□ -1.6
CUL4A-212ENST00000617546 KRTAP15-1Q3LI76 137 aa5.07□□□□□ -1.6
CUL4A-212ENST00000617546 ZANQ9Y493 2812 aa5.04□□□□□ -1.6
CUL4A-212ENST00000617546 VPS13CQ709C8 3753 aa5.04□□□□□ -1.6
CUL4A-212ENST00000617546 KRTAP10-6P60371 365 aaPredicted RBP5.03□□□□□ -1.6
CUL4A-212ENST00000617546 CSMD1Q96PZ7 3565 aa5.01□□□□□ -1.61
CUL4A-212ENST00000617546 CSMD2Q7Z408 3487 aa4.97□□□□□ -1.61
CUL4A-212ENST00000617546 ASH1LQ9NR48 2969 aaKnown RBP4.97□□□□□ -1.61
CUL4A-212ENST00000617546 CELSR2Q9HCU4 2923 aa4.96□□□□□ -1.61
CUL4A-212ENST00000617546 ZNF469Q96JG9 3925 aaPredicted RBP4.96□□□□□ -1.61
CUL4A-212ENST00000617546 INE1O15225 51 aa4.94□□□□□ -1.62
CUL4A-212ENST00000617546 CRYBG3Q68DQ2 2970 aa4.94□□□□□ -1.62
CUL4A-212ENST00000617546 DCHS2Q6V1P9 2916 aa4.94□□□□□ -1.62
CUL4A-212ENST00000617546 ZFHX3Q15911 3703 aa4.93□□□□□ -1.62
CUL4A-212ENST00000617546 PRO2289Q9P1D8 64 aa4.93□□□□□ -1.62
CUL4A-212ENST00000617546 A0A1B0GVY2 172 aa4.92□□□□□ -1.62
CUL4A-212ENST00000617546 MXRA5Q9NR99 2828 aa4.92□□□□□ -1.62
CUL4A-212ENST00000617546 PDZD2O15018 2839 aa4.91□□□□□ -1.62
CUL4A-212ENST00000617546 NF1P21359 2839 aa4.91□□□□□ -1.62
CUL4A-212ENST00000617546 FBN2P35556 2912 aa4.89□□□□□ -1.63
CUL4A-212ENST00000617546 KRTAP3-2Q9BYR7 98 aa4.87□□□□□ -1.63
CUL4A-212ENST00000617546 TGP01266 2768 aa4.86□□□□□ -1.63
CUL4A-212ENST00000617546 KRTAP23-1A1A580 65 aa4.84□□□□□ -1.63
CUL4A-212ENST00000617546 CUBNO60494 3623 aa4.84□□□□□ -1.63
CUL4A-212ENST00000617546 KRTAP3-3Q9BYR6 98 aa4.81□□□□□ -1.64
CUL4A-212ENST00000617546 CELSR1Q9NYQ6 3014 aa4.8□□□□□ -1.64
CUL4A-212ENST00000617546 KRTAP10-10P60014 251 aa4.8□□□□□ -1.64
CUL4A-212ENST00000617546 OTOGQ6ZRI0 2925 aa4.77□□□□□ -1.65
CUL4A-212ENST00000617546 SVEP1Q4LDE5 3571 aa4.77□□□□□ -1.65
CUL4A-212ENST00000617546 TENM2Q9NT68 2774 aa4.75□□□□□ -1.65
CUL4A-212ENST00000617546 TENM1Q9UKZ4 2725 aa4.74□□□□□ -1.65
CUL4A-212ENST00000617546 TENM3Q9P273 2699 aa4.72□□□□□ -1.65
CUL4A-212ENST00000617546 ANK3Q12955 4377 aaKnown RBP4.72□□□□□ -1.65
CUL4A-212ENST00000617546 ANK2Q01484 3957 aa4.69□□□□□ -1.66
CUL4A-212ENST00000617546 CMYA5Q8N3K9 4069 aa4.68□□□□□ -1.66
CUL4A-212ENST00000617546 VWFP04275 2813 aa4.58□□□□□ -1.68
CUL4A-212ENST00000617546 FBN1P35555 2871 aaKnown RBP4.55□□□□□ -1.68
CUL4A-212ENST00000617546 DNAH3Q8TD57 4116 aa4.54□□□□□ -1.68
CUL4A-212ENST00000617546 PKD1L1Q8TDX9 2849 aa4.54□□□□□ -1.68
CUL4A-212ENST00000617546 KRTAP10-4P60372 401 aaPredicted RBP4.54□□□□□ -1.68
CUL4A-212ENST00000617546 DNHD1Q96M86 4753 aa4.54□□□□□ -1.68
CUL4A-212ENST00000617546 MT1HL1P0DM35 61 aa4.5□□□□□ -1.69
CUL4A-212ENST00000617546 KRTAP10-12P60413 245 aa4.45□□□□□ -1.7
CUL4A-212ENST00000617546 TRRAPQ9Y4A5 3859 aa4.42□□□□□ -1.7
CUL4A-212ENST00000617546 ALMS1Q8TCU4 4167 aa4.41□□□□□ -1.7
CUL4A-212ENST00000617546 KRTAP12-3P60328 96 aa4.4□□□□□ -1.7
CUL4A-212ENST00000617546 FBN3Q75N90 2809 aa4.38□□□□□ -1.71
CUL4A-212ENST00000617546 HUWE1Q7Z6Z7 4374 aaKnown RBP4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms