RNA–Protein interactions for RNA: ENST00000616973.4

NR1H3-235, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1H3, Length 1,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-235ENST00000616973 H0Y9P7 68 aa9.17□□□□□ -0.94
NR1H3-235ENST00000616973 TP53AIP1Q9HCN2 124 aa9.17□□□□□ -0.94
NR1H3-235ENST00000616973 LINC00208Q96KT6 92 aa9.15□□□□□ -0.94
NR1H3-235ENST00000616973 LRP1BQ9NZR2 4599 aa9.15□□□□□ -0.94
NR1H3-235ENST00000616973 FP248Q71RG6 208 aaPredicted RBP9.15□□□□□ -0.95
NR1H3-235ENST00000616973 TRAV22A0A0B4J277 110 aa9.14□□□□□ -0.95
NR1H3-235ENST00000616973 A0A1B0GVY2 172 aa9.13□□□□□ -0.95
NR1H3-235ENST00000616973 MRPL34Q9BQ48 92 aaKnown RBP9.13□□□□□ -0.95
NR1H3-235ENST00000616973 SPINK6Q6UWN8 80 aa9.12□□□□□ -0.95
NR1H3-235ENST00000616973 NOTCH2NLQ7Z3S9 236 aa9.1□□□□□ -0.95
NR1H3-235ENST00000616973 KMT2CQ8NEZ4 4911 aaKnown RBP9.1□□□□□ -0.95
NR1H3-235ENST00000616973 C1orf64Q8NEQ6 169 aa9.09□□□□□ -0.95
NR1H3-235ENST00000616973 C8orf87E5RJ46 101 aa9.09□□□□□ -0.95
NR1H3-235ENST00000616973 PLA2G1BP04054 148 aaKnown RBP9.07□□□□□ -0.96
NR1H3-235ENST00000616973 CYP4F30PQ9H0H9 118 aa9.07□□□□□ -0.96
NR1H3-235ENST00000616973 LIMD2Q9BT23 127 aa9.07□□□□□ -0.96
NR1H3-235ENST00000616973 C1orf195Q5TG92 126 aa9.06□□□□□ -0.96
NR1H3-235ENST00000616973 SPANXA2-OT1Q8N9U9 137 aa9.05□□□□□ -0.96
NR1H3-235ENST00000616973 NDUFS5O43920 106 aa9.05□□□□□ -0.96
NR1H3-235ENST00000616973 TYMSOSQ8TAI1 123 aa9.03□□□□□ -0.96
NR1H3-235ENST00000616973 RYR2Q92736 4967 aa9□□□□□ -0.97
NR1H3-235ENST00000616973 VPS13BQ7Z7G8 4022 aa9□□□□□ -0.97
NR1H3-235ENST00000616973 PKHD1P08F94 4074 aa9□□□□□ -0.97
NR1H3-235ENST00000616973 SPINK1P00995 79 aa9□□□□□ -0.97
NR1H3-235ENST00000616973 C4orf48Q5BLP8 95 aa9□□□□□ -0.97
NR1H3-235ENST00000616973 LINC00313P59037 77 aa8.99□□□□□ -0.97
NR1H3-235ENST00000616973 BRK1Q8WUW1 75 aa8.98□□□□□ -0.97
NR1H3-235ENST00000616973 SMR3BP02814 79 aaPredicted RBP8.97□□□□□ -0.97
NR1H3-235ENST00000616973 KRTAP10-4P60372 401 aaPredicted RBP8.96□□□□□ -0.97
NR1H3-235ENST00000616973 RPS29P62273 56 aaKnown RBP8.96□□□□□ -0.97
NR1H3-235ENST00000616973 KRTAP13-3Q3SY46 172 aa8.95□□□□□ -0.98
NR1H3-235ENST00000616973 PRR4Q16378 134 aa8.95□□□□□ -0.98
NR1H3-235ENST00000616973 SPAG11AQ6PDA7 123 aa8.94□□□□□ -0.98
NR1H3-235ENST00000616973 Q8N9P0 234 aaPredicted RBP8.94□□□□□ -0.98
NR1H3-235ENST00000616973 DYNC1H1Q14204 4646 aaKnown RBP8.94□□□□□ -0.98
NR1H3-235ENST00000616973 IGLV7-46A0A075B6I9 117 aa8.93□□□□□ -0.98
NR1H3-235ENST00000616973 PRR26Q8N8Z3 221 aa8.93□□□□□ -0.98
NR1H3-235ENST00000616973 V9GYY9 64 aa8.93□□□□□ -0.98
NR1H3-235ENST00000616973 LOC101927531A0A1B0GV80 90 aa8.92□□□□□ -0.98
NR1H3-235ENST00000616973 Q5W150 140 aa8.92□□□□□ -0.98
NR1H3-235ENST00000616973 LINC00304Q8N9R0 145 aa8.92□□□□□ -0.98
NR1H3-235ENST00000616973 KRTAP16-1A8MUX0 517 aa8.91□□□□□ -0.98
NR1H3-235ENST00000616973 PCOTHQ58A44 107 aa8.89□□□□□ -0.99
NR1H3-235ENST00000616973 MPLKIPQ8TAP9 179 aa8.89□□□□□ -0.99
NR1H3-235ENST00000616973 RYR3Q15413 4870 aa8.88□□□□□ -0.99
NR1H3-235ENST00000616973 FAM229AH3BQW9 127 aa8.88□□□□□ -0.99
NR1H3-235ENST00000616973 Q1T7F1 81 aa8.88□□□□□ -0.99
NR1H3-235ENST00000616973 APOBP04114 4563 aaKnown RBP8.86□□□□□ -0.99
NR1H3-235ENST00000616973 SEC61GP60059 68 aa8.82□□□□□ -1
NR1H3-235ENST00000616973 COA5Q86WW8 74 aa8.78□□□□□ -1
NR1H3-235ENST00000616973 IGKV2-30P06310 120 aa8.76□□□□□ -1.01
NR1H3-235ENST00000616973 FAT1Q14517 4588 aa8.74□□□□□ -1.01
NR1H3-235ENST00000616973 PMAIP1Q13794 54 aa8.74□□□□□ -1.01
NR1H3-235ENST00000616973 PKHD1L1Q86WI1 4243 aa8.73□□□□□ -1.01
NR1H3-235ENST00000616973 RETNLBQ9BQ08 111 aa8.73□□□□□ -1.01
NR1H3-235ENST00000616973 HRES1P13985 223 aa8.7□□□□□ -1.02
NR1H3-235ENST00000616973 DMAC1Q96GE9 116 aa8.66□□□□□ -1.02
NR1H3-235ENST00000616973 Q5VSD8 79 aa8.65□□□□□ -1.02
NR1H3-235ENST00000616973 ACYP2P14621 99 aa8.64□□□□□ -1.03
NR1H3-235ENST00000616973 A8MUU9 505 aa8.62□□□□□ -1.03
NR1H3-235ENST00000616973 KRTAP10-8P60410 259 aa8.62□□□□□ -1.03
NR1H3-235ENST00000616973 C20orf166-AS1Q96NR2 134 aa8.62□□□□□ -1.03
NR1H3-235ENST00000616973 IGKV2D-30A0A075B6S6 120 aa8.61□□□□□ -1.03
NR1H3-235ENST00000616973 PSPHP1O15172 72 aa8.61□□□□□ -1.03
NR1H3-235ENST00000616973 Q8N1X5 172 aa8.59□□□□□ -1.03
NR1H3-235ENST00000616973 C9orf92A6NGG3 77 aa8.58□□□□□ -1.04
NR1H3-235ENST00000616973 A8MUN3 132 aa8.58□□□□□ -1.04
NR1H3-235ENST00000616973 C7orf65Q6ZTY9 151 aa8.57□□□□□ -1.04
NR1H3-235ENST00000616973 FLG2Q5D862 2391 aaPredicted RBP8.57□□□□□ -1.04
NR1H3-235ENST00000616973 EPPK1P58107 5090 aaKnown RBP8.57□□□□□ -1.04
NR1H3-235ENST00000616973 Q5VV11 94 aa8.56□□□□□ -1.04
NR1H3-235ENST00000616973 HSPG2P98160 4391 aa8.55□□□□□ -1.04
NR1H3-235ENST00000616973 LINC01558Q9Y6Z2 57 aa8.55□□□□□ -1.04
NR1H3-235ENST00000616973 PRR15LQ9BU68 103 aa8.52□□□□□ -1.04
NR1H3-235ENST00000616973 CHKB-CPT1BH3BT56 60 aa8.49□□□□□ -1.05
NR1H3-235ENST00000616973 Q75L30 129 aa8.49□□□□□ -1.05
NR1H3-235ENST00000616973 KRTAP17-1Q9BYP8 105 aa8.49□□□□□ -1.05
NR1H3-235ENST00000616973 ATP11AUNQ6ZP68 121 aa8.48□□□□□ -1.05
NR1H3-235ENST00000616973 KTN1-AS1Q86SY8 53 aa8.48□□□□□ -1.05
NR1H3-235ENST00000616973 RYR1P21817 5038 aa8.46□□□□□ -1.05
NR1H3-235ENST00000616973 TNXBP22105 4242 aa8.46□□□□□ -1.06
NR1H3-235ENST00000616973 KIAA1109Q2LD37 5005 aa8.45□□□□□ -1.06
NR1H3-235ENST00000616973 FAT3Q8TDW7 4589 aa8.42□□□□□ -1.06
NR1H3-235ENST00000616973 LRP1Q07954 4544 aaKnown RBP8.39□□□□□ -1.07
NR1H3-235ENST00000616973 MT1HL1P0DM35 61 aa8.39□□□□□ -1.07
NR1H3-235ENST00000616973 CDC42SE1Q9NRR8 79 aa8.39□□□□□ -1.07
NR1H3-235ENST00000616973 SPINK7P58062 85 aa8.38□□□□□ -1.07
NR1H3-235ENST00000616973 A6NED7 52 aa8.37□□□□□ -1.07
NR1H3-235ENST00000616973 A8MU10 97 aa8.35□□□□□ -1.07
NR1H3-235ENST00000616973 LCA10Q71F78 164 aa8.35□□□□□ -1.07
NR1H3-235ENST00000616973 A6NN06 94 aa8.35□□□□□ -1.07
NR1H3-235ENST00000616973 SPTSSBQ8NFR3 76 aa8.33□□□□□ -1.08
NR1H3-235ENST00000616973 RPL37P61927 97 aaKnown RBP8.33□□□□□ -1.08
NR1H3-235ENST00000616973 RBM12B-AS1Q9P1G2 102 aa8.32□□□□□ -1.08
NR1H3-235ENST00000616973 XP32Q5T750 250 aa8.29□□□□□ -1.08
NR1H3-235ENST00000616973 KRTAP3-1Q9BYR8 98 aa8.29□□□□□ -1.08
NR1H3-235ENST00000616973 A0A1B0GU69 56 aa8.28□□□□□ -1.08
NR1H3-235ENST00000616973 DMBT1Q9UGM3 2413 aaPredicted RBP8.28□□□□□ -1.08
NR1H3-235ENST00000616973 MYCBP2O75592 4640 aa8.25□□□□□ -1.09
NR1H3-235ENST00000616973 COX6B2Q6YFQ2 88 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms