RNA–Protein interactions for RNA: ENST00000615136.4

MMP28-204, Transcript of matrix metallopeptidase 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MMP28, Length 2,033 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-204ENST00000615136 RYR3Q15413 4870 aa11.27□□□□□ -0.61
MMP28-204ENST00000615136 A0A1B0GVY2 172 aa11.26□□□□□ -0.61
MMP28-204ENST00000615136 CYP4F30PQ9H0H9 118 aa11.26□□□□□ -0.61
MMP28-204ENST00000615136 A0A087X002 238 aa11.25□□□□□ -0.61
MMP28-204ENST00000615136 C8orf17Q9NRJ1 99 aa11.23□□□□□ -0.61
MMP28-204ENST00000615136 A0A1B0GVX0 72 aa11.22□□□□□ -0.61
MMP28-204ENST00000615136 KRTAP13-2Q52LG2 175 aa11.21□□□□□ -0.62
MMP28-204ENST00000615136 C1orf64Q8NEQ6 169 aa11.21□□□□□ -0.62
MMP28-204ENST00000615136 APOBP04114 4563 aaKnown RBP11.2□□□□□ -0.62
MMP28-204ENST00000615136 KRTAP1-4P0C5Y4 121 aa11.19□□□□□ -0.62
MMP28-204ENST00000615136 SPANXA2-OT1Q8N9U9 137 aa11.18□□□□□ -0.62
MMP28-204ENST00000615136 TP53AIP1Q9HCN2 124 aa11.18□□□□□ -0.62
MMP28-204ENST00000615136 IGHV6-1A0A0B4J1U7 121 aa11.16□□□□□ -0.62
MMP28-204ENST00000615136 CDK2AP2O75956 126 aa11.16□□□□□ -0.62
MMP28-204ENST00000615136 SMR3BP02814 79 aaPredicted RBP11.16□□□□□ -0.62
MMP28-204ENST00000615136 CD164Q04900 197 aa11.15□□□□□ -0.62
MMP28-204ENST00000615136 SSBP3-AS1Q7Z2R9 100 aa11.14□□□□□ -0.63
MMP28-204ENST00000615136 FAT1Q14517 4588 aa11.14□□□□□ -0.63
MMP28-204ENST00000615136 PRR4Q16378 134 aa11.14□□□□□ -0.63
MMP28-204ENST00000615136 MRPL34Q9BQ48 92 aaKnown RBP11.11□□□□□ -0.63
MMP28-204ENST00000615136 MPLKIPQ8TAP9 179 aa11.1□□□□□ -0.63
MMP28-204ENST00000615136 SPINK6Q6UWN8 80 aa11.08□□□□□ -0.64
MMP28-204ENST00000615136 NOTCH2NLQ7Z3S9 236 aa11.08□□□□□ -0.64
MMP28-204ENST00000615136 PLA2G1BP04054 148 aaKnown RBP11.05□□□□□ -0.64
MMP28-204ENST00000615136 NDUFS5O43920 106 aa11.04□□□□□ -0.64
MMP28-204ENST00000615136 Q1T7F1 81 aa11.03□□□□□ -0.64
MMP28-204ENST00000615136 KRTAP10-4P60372 401 aaPredicted RBP11.02□□□□□ -0.65
MMP28-204ENST00000615136 IGLV7-46A0A075B6I9 117 aa11□□□□□ -0.65
MMP28-204ENST00000615136 PRO0628Q9UI54 55 aa10.97□□□□□ -0.65
MMP28-204ENST00000615136 C8orf87E5RJ46 101 aa10.97□□□□□ -0.65
MMP28-204ENST00000615136 PRR26Q8N8Z3 221 aa10.96□□□□□ -0.65
MMP28-204ENST00000615136 PCOTHQ58A44 107 aa10.96□□□□□ -0.66
MMP28-204ENST00000615136 TYMSOSQ8TAI1 123 aa10.96□□□□□ -0.66
MMP28-204ENST00000615136 C1orf195Q5TG92 126 aa10.94□□□□□ -0.66
MMP28-204ENST00000615136 KRTAP13-3Q3SY46 172 aa10.92□□□□□ -0.66
MMP28-204ENST00000615136 LOC101927531A0A1B0GV80 90 aa10.89□□□□□ -0.67
MMP28-204ENST00000615136 Q5W150 140 aa10.89□□□□□ -0.67
MMP28-204ENST00000615136 V9GYY9 64 aa10.89□□□□□ -0.67
MMP28-204ENST00000615136 COA5Q86WW8 74 aa10.88□□□□□ -0.67
MMP28-204ENST00000615136 EPPK1P58107 5090 aaKnown RBP10.87□□□□□ -0.67
MMP28-204ENST00000615136 PKHD1L1Q86WI1 4243 aa10.86□□□□□ -0.67
MMP28-204ENST00000615136 HSPG2P98160 4391 aa10.86□□□□□ -0.67
MMP28-204ENST00000615136 LINC00313P59037 77 aa10.84□□□□□ -0.67
MMP28-204ENST00000615136 C4orf48Q5BLP8 95 aa10.84□□□□□ -0.67
MMP28-204ENST00000615136 Q8N9P0 234 aaPredicted RBP10.84□□□□□ -0.67
MMP28-204ENST00000615136 BRK1Q8WUW1 75 aa10.84□□□□□ -0.67
MMP28-204ENST00000615136 LIMD2Q9BT23 127 aa10.84□□□□□ -0.67
MMP28-204ENST00000615136 SPINK1P00995 79 aa10.82□□□□□ -0.68
MMP28-204ENST00000615136 LINC00304Q8N9R0 145 aa10.82□□□□□ -0.68
MMP28-204ENST00000615136 PSPHP1O15172 72 aa10.81□□□□□ -0.68
MMP28-204ENST00000615136 RYR1P21817 5038 aa10.79□□□□□ -0.68
MMP28-204ENST00000615136 KRTAP16-1A8MUX0 517 aa10.77□□□□□ -0.68
MMP28-204ENST00000615136 A8MUN3 132 aa10.77□□□□□ -0.69
MMP28-204ENST00000615136 FAM229AH3BQW9 127 aa10.77□□□□□ -0.69
MMP28-204ENST00000615136 KRTAP17-1Q9BYP8 105 aa10.75□□□□□ -0.69
MMP28-204ENST00000615136 HRES1P13985 223 aa10.74□□□□□ -0.69
MMP28-204ENST00000615136 LRP1Q07954 4544 aaKnown RBP10.73□□□□□ -0.69
MMP28-204ENST00000615136 Q5VV11 94 aa10.73□□□□□ -0.69
MMP28-204ENST00000615136 KIAA1109Q2LD37 5005 aa10.72□□□□□ -0.69
MMP28-204ENST00000615136 SPAG11AQ6PDA7 123 aa10.7□□□□□ -0.7
MMP28-204ENST00000615136 RPS29P62273 56 aaKnown RBP10.69□□□□□ -0.7
MMP28-204ENST00000615136 Q5VSD8 79 aa10.68□□□□□ -0.7
MMP28-204ENST00000615136 IGKV2-30P06310 120 aa10.67□□□□□ -0.7
MMP28-204ENST00000615136 PRR15LQ9BU68 103 aa10.67□□□□□ -0.7
MMP28-204ENST00000615136 TNXBP22105 4242 aa10.65□□□□□ -0.7
MMP28-204ENST00000615136 RETNLBQ9BQ08 111 aa10.64□□□□□ -0.71
MMP28-204ENST00000615136 LINC01558Q9Y6Z2 57 aa10.63□□□□□ -0.71
MMP28-204ENST00000615136 Q75L30 129 aa10.62□□□□□ -0.71
MMP28-204ENST00000615136 DMAC1Q96GE9 116 aa10.62□□□□□ -0.71
MMP28-204ENST00000615136 SEC61GP60059 68 aa10.61□□□□□ -0.71
MMP28-204ENST00000615136 ACYP2P14621 99 aa10.6□□□□□ -0.71
MMP28-204ENST00000615136 CHKB-CPT1BH3BT56 60 aa10.58□□□□□ -0.72
MMP28-204ENST00000615136 Q8N1X5 172 aa10.57□□□□□ -0.72
MMP28-204ENST00000615136 FLG2Q5D862 2391 aaPredicted RBP10.57□□□□□ -0.72
MMP28-204ENST00000615136 FAT3Q8TDW7 4589 aa10.56□□□□□ -0.72
MMP28-204ENST00000615136 KRTAP10-8P60410 259 aa10.53□□□□□ -0.72
MMP28-204ENST00000615136 C9orf92A6NGG3 77 aa10.51□□□□□ -0.73
MMP28-204ENST00000615136 MYCBP2O75592 4640 aa10.5□□□□□ -0.73
MMP28-204ENST00000615136 IGKV2D-30A0A075B6S6 120 aa10.48□□□□□ -0.73
MMP28-204ENST00000615136 A8MU10 97 aa10.47□□□□□ -0.73
MMP28-204ENST00000615136 A6NED7 52 aa10.45□□□□□ -0.74
MMP28-204ENST00000615136 BIRC6Q9NR09 4857 aa10.43□□□□□ -0.74
MMP28-204ENST00000615136 LCA10Q71F78 164 aa10.41□□□□□ -0.74
MMP28-204ENST00000615136 C7orf65Q6ZTY9 151 aa10.39□□□□□ -0.75
MMP28-204ENST00000615136 DMBT1Q9UGM3 2413 aaPredicted RBP10.38□□□□□ -0.75
MMP28-204ENST00000615136 CDC42SE1Q9NRR8 79 aa10.38□□□□□ -0.75
MMP28-204ENST00000615136 MT1HL1P0DM35 61 aa10.36□□□□□ -0.75
MMP28-204ENST00000615136 PMAIP1Q13794 54 aa10.36□□□□□ -0.75
MMP28-204ENST00000615136 C20orf166-AS1Q96NR2 134 aa10.36□□□□□ -0.75
MMP28-204ENST00000615136 A8MUU9 505 aa10.35□□□□□ -0.75
MMP28-204ENST00000615136 SPINK7P58062 85 aa10.34□□□□□ -0.75
MMP28-204ENST00000615136 KRTAP4-5Q9BYR2 181 aa10.31□□□□□ -0.76
MMP28-204ENST00000615136 ATP11AUNQ6ZP68 121 aa10.3□□□□□ -0.76
MMP28-204ENST00000615136 HERC2O95714 4834 aa10.25□□□□□ -0.77
MMP28-204ENST00000615136 A0A1B0GU69 56 aa10.24□□□□□ -0.77
MMP28-204ENST00000615136 SPTSSBQ8NFR3 76 aa10.24□□□□□ -0.77
MMP28-204ENST00000615136 ABCA13Q86UQ4 5058 aa10.22□□□□□ -0.77
MMP28-204ENST00000615136 A6NN06 94 aa10.14□□□□□ -0.79
MMP28-204ENST00000615136 XP32Q5T750 250 aa10.12□□□□□ -0.79
MMP28-204ENST00000615136 KRTAP3-1Q9BYR8 98 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms