RNA–Protein interactions for RNA: ENST00000614526.1

LIG4-205, Transcript of DNA ligase 4, humanhuman

TSL 2 BASIC

Gene LIG4, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-205ENST00000614526 DMBT1Q9UGM3 2413 aaPredicted RBP1.99□□□□□ -2.09
LIG4-205ENST00000614526 MMP24-AS1A0A0U1RRL7 71 aa1.98□□□□□ -2.09
LIG4-205ENST00000614526 hDV103S1A0JD37 113 aa1.98□□□□□ -2.09
LIG4-205ENST00000614526 RETNLBQ9BQ08 111 aa1.98□□□□□ -2.09
LIG4-205ENST00000614526 LRP1Q07954 4544 aaKnown RBP1.98□□□□□ -2.09
LIG4-205ENST00000614526 EPPK1P58107 5090 aaKnown RBP1.98□□□□□ -2.09
LIG4-205ENST00000614526 PRR4Q16378 134 aa1.98□□□□□ -2.09
LIG4-205ENST00000614526 SMIM20Q8N5G0 67 aa1.98□□□□□ -2.09
LIG4-205ENST00000614526 MUC5BQ9HC84 5762 aaPredicted RBP1.98□□□□□ -2.09
LIG4-205ENST00000614526 A0A1B0GVX0 72 aa1.98□□□□□ -2.09
LIG4-205ENST00000614526 J3KT08 172 aa1.98□□□□□ -2.09
LIG4-205ENST00000614526 KRTAP9-8Q9BYQ0 159 aa1.98□□□□□ -2.09
LIG4-205ENST00000614526 KRTAP4-5Q9BYR2 181 aa1.98□□□□□ -2.09
LIG4-205ENST00000614526 C8orf17Q9NRJ1 99 aa1.98□□□□□ -2.09
LIG4-205ENST00000614526 KRTAP29-1A8MX34 341 aaPredicted RBP1.97□□□□□ -2.09
LIG4-205ENST00000614526 LCE2BO14633 110 aa1.97□□□□□ -2.09
LIG4-205ENST00000614526 LINC00208Q96KT6 92 aa1.97□□□□□ -2.09
LIG4-205ENST00000614526 FAM229BQ4G0N7 80 aa1.97□□□□□ -2.09
LIG4-205ENST00000614526 C1orf195Q5TG92 126 aa1.97□□□□□ -2.09
LIG4-205ENST00000614526 SVIPQ8NHG7 77 aa1.97□□□□□ -2.09
LIG4-205ENST00000614526 HSPG2P98160 4391 aa1.97□□□□□ -2.09
LIG4-205ENST00000614526 H7BZZ5 65 aa1.97□□□□□ -2.09
LIG4-205ENST00000614526 KRTAP10-4P60372 401 aaPredicted RBP1.97□□□□□ -2.09
LIG4-205ENST00000614526 FAM229AH3BQW9 127 aa1.96□□□□□ -2.09
LIG4-205ENST00000614526 Q5VSD8 79 aa1.96□□□□□ -2.09
LIG4-205ENST00000614526 LINC00304Q8N9R0 145 aa1.96□□□□□ -2.09
LIG4-205ENST00000614526 H0Y9P7 68 aa1.96□□□□□ -2.1
LIG4-205ENST00000614526 A0A0U1RQV1 116 aa1.96□□□□□ -2.1
LIG4-205ENST00000614526 CD164Q04900 197 aa1.96□□□□□ -2.1
LIG4-205ENST00000614526 KLKP1Q107X0 134 aa1.96□□□□□ -2.1
LIG4-205ENST00000614526 MRPL34Q9BQ48 92 aaKnown RBP1.95□□□□□ -2.1
LIG4-205ENST00000614526 MP68P56378 58 aa1.95□□□□□ -2.1
LIG4-205ENST00000614526 LINC00313P59037 77 aa1.95□□□□□ -2.1
LIG4-205ENST00000614526 PCOTHQ58A44 107 aa1.95□□□□□ -2.1
LIG4-205ENST00000614526 RYR1P21817 5038 aa1.95□□□□□ -2.1
LIG4-205ENST00000614526 MYCBP2O75592 4640 aa1.95□□□□□ -2.1
LIG4-205ENST00000614526 C9orf92A6NGG3 77 aa1.95□□□□□ -2.1
LIG4-205ENST00000614526 C5orf47Q569G3 176 aa1.95□□□□□ -2.1
LIG4-205ENST00000614526 FAM236DA0A1B0GTK5 79 aa1.94□□□□□ -2.1
LIG4-205ENST00000614526 SPINK1P00995 79 aa1.94□□□□□ -2.1
LIG4-205ENST00000614526 FAM236CP0DP71 79 aa1.94□□□□□ -2.1
LIG4-205ENST00000614526 TMEM258P61165 79 aa1.94□□□□□ -2.1
LIG4-205ENST00000614526 C1orf64Q8NEQ6 169 aa1.94□□□□□ -2.1
LIG4-205ENST00000614526 LIMD2Q9BT23 127 aa1.94□□□□□ -2.1
LIG4-205ENST00000614526 Q5W150 140 aa1.94□□□□□ -2.1
LIG4-205ENST00000614526 PKHD1L1Q86WI1 4243 aa1.94□□□□□ -2.1
LIG4-205ENST00000614526 TRAV22A0A0B4J277 110 aa1.94□□□□□ -2.1
LIG4-205ENST00000614526 Q8N1X5 172 aa1.93□□□□□ -2.1
LIG4-205ENST00000614526 OXTP01178 125 aa1.93□□□□□ -2.1
LIG4-205ENST00000614526 LCE2AQ5TA79 106 aaPredicted RBP1.93□□□□□ -2.1
LIG4-205ENST00000614526 ASB16-AS1Q495Z4 193 aa1.92□□□□□ -2.1
LIG4-205ENST00000614526 ZCCHC13Q8WW36 166 aaKnown RBP1.92□□□□□ -2.1
LIG4-205ENST00000614526 KRTAP4-7Q9BYR0 210 aa1.92□□□□□ -2.1
LIG4-205ENST00000614526 NDUFC1O43677 76 aa1.92□□□□□ -2.1
LIG4-205ENST00000614526 Q5XG85 94 aa1.91□□□□□ -2.1
LIG4-205ENST00000614526 SPAG11AQ6PDA7 123 aa1.91□□□□□ -2.1
LIG4-205ENST00000614526 TP53AIP1Q9HCN2 124 aa1.91□□□□□ -2.1
LIG4-205ENST00000614526 C8orf87E5RJ46 101 aa1.91□□□□□ -2.1
LIG4-205ENST00000614526 Q8N9P0 234 aaPredicted RBP1.91□□□□□ -2.1
LIG4-205ENST00000614526 IGKV2D-30A0A075B6S6 120 aa1.91□□□□□ -2.1
LIG4-205ENST00000614526 IGKV2-30P06310 120 aa1.91□□□□□ -2.1
LIG4-205ENST00000614526 KRTAP5-3Q6L8H2 238 aa1.91□□□□□ -2.1
LIG4-205ENST00000614526 FAT3Q8TDW7 4589 aa1.91□□□□□ -2.1
LIG4-205ENST00000614526 KRTAP4-8A0A0G2JLE6 195 aa1.91□□□□□ -2.1
LIG4-205ENST00000614526 KRTAP16-1A8MUX0 517 aa1.91□□□□□ -2.1
LIG4-205ENST00000614526 TNXBP22105 4242 aa1.9□□□□□ -2.11
LIG4-205ENST00000614526 KRTAP10-8P60410 259 aa1.9□□□□□ -2.11
LIG4-205ENST00000614526 LCE2CQ5TA81 110 aa1.9□□□□□ -2.11
LIG4-205ENST00000614526 MPLKIPQ8TAP9 179 aa1.9□□□□□ -2.11
LIG4-205ENST00000614526 LORP23490 312 aaPredicted RBP1.89□□□□□ -2.11
LIG4-205ENST00000614526 SERP1Q9Y6X1 66 aa1.89□□□□□ -2.11
LIG4-205ENST00000614526 H3BPC8 53 aa1.88□□□□□ -2.11
LIG4-205ENST00000614526 CYP4F30PQ9H0H9 118 aa1.88□□□□□ -2.11
LIG4-205ENST00000614526 RPS28P62857 69 aaKnown RBP1.88□□□□□ -2.11
LIG4-205ENST00000614526 KRTAP13-3Q3SY46 172 aa1.88□□□□□ -2.11
LIG4-205ENST00000614526 ABCA13Q86UQ4 5058 aa1.88□□□□□ -2.11
LIG4-205ENST00000614526 RPS29P62273 56 aaKnown RBP1.88□□□□□ -2.11
LIG4-205ENST00000614526 C4orf26Q17RF5 130 aa1.88□□□□□ -2.11
LIG4-205ENST00000614526 MT1HL1P0DM35 61 aa1.87□□□□□ -2.11
LIG4-205ENST00000614526 HRES1P13985 223 aa1.87□□□□□ -2.11
LIG4-205ENST00000614526 LOC101927531A0A1B0GV80 90 aa1.87□□□□□ -2.11
LIG4-205ENST00000614526 ATP5EP56381 51 aaPredicted RBP1.87□□□□□ -2.11
LIG4-205ENST00000614526 IGLV7-46A0A075B6I9 117 aa1.87□□□□□ -2.11
LIG4-205ENST00000614526 FP248Q71RG6 208 aaPredicted RBP1.87□□□□□ -2.11
LIG4-205ENST00000614526 LPAP08519 4548 aa1.86□□□□□ -2.11
LIG4-205ENST00000614526 COA5Q86WW8 74 aa1.86□□□□□ -2.11
LIG4-205ENST00000614526 HERC2O95714 4834 aa1.85□□□□□ -2.11
LIG4-205ENST00000614526 SMIM26A0A096LP01 95 aa1.85□□□□□ -2.11
LIG4-205ENST00000614526 SPANXA2-OT1Q8N9U9 137 aa1.85□□□□□ -2.11
LIG4-205ENST00000614526 PSPHP1O15172 72 aa1.85□□□□□ -2.11
LIG4-205ENST00000614526 KRTAP9-2Q9BYQ4 174 aa1.85□□□□□ -2.11
LIG4-205ENST00000614526 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.84□□□□□ -2.11
LIG4-205ENST00000614526 LRP2P98164 4655 aa1.84□□□□□ -2.11
LIG4-205ENST00000614526 A8MUU9 505 aa1.84□□□□□ -2.11
LIG4-205ENST00000614526 SPINK7P58062 85 aa1.84□□□□□ -2.11
LIG4-205ENST00000614526 C7orf65Q6ZTY9 151 aa1.84□□□□□ -2.11
LIG4-205ENST00000614526 C20orf166-AS1Q96NR2 134 aa1.84□□□□□ -2.11
LIG4-205ENST00000614526 ATP11AUNQ6ZP68 121 aa1.83□□□□□ -2.12
LIG4-205ENST00000614526 CHKB-CPT1BH3BT56 60 aa1.83□□□□□ -2.12
LIG4-205ENST00000614526 BIRC6Q9NR09 4857 aa1.83□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 134.9 ms