RNA–Protein interactions for RNA: ENST00000614488.4

SCAMP1-205, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,276 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-205ENST00000614488 PKD1L1Q8TDX9 2849 aa0.74□□□□□ -2.29
SCAMP1-205ENST00000614488 PLCE1Q9P212 2302 aa0.74□□□□□ -2.29
SCAMP1-205ENST00000614488 SPTY2D1-AS1A0A0U1RR47 76 aa0.74□□□□□ -2.29
SCAMP1-205ENST00000614488 SFTA3P0C7M3 94 aa0.74□□□□□ -2.29
SCAMP1-205ENST00000614488 C3orf79P0CE67 100 aa0.74□□□□□ -2.29
SCAMP1-205ENST00000614488 PIGYQ3MUY2 71 aa0.74□□□□□ -2.29
SCAMP1-205ENST00000614488 DEFB124Q8NES8 71 aa0.74□□□□□ -2.29
SCAMP1-205ENST00000614488 CNFNQ9BYD5 112 aa0.73□□□□□ -2.29
SCAMP1-205ENST00000614488 UBR4Q5T4S7 5183 aa0.73□□□□□ -2.29
SCAMP1-205ENST00000614488 NBEAL1Q6ZS30 2694 aa0.73□□□□□ -2.29
SCAMP1-205ENST00000614488 NSD1Q96L73 2696 aaPredicted RBP0.73□□□□□ -2.29
SCAMP1-205ENST00000614488 ANK2Q01484 3957 aa0.73□□□□□ -2.29
SCAMP1-205ENST00000614488 STAB1Q9NY15 2570 aa0.73□□□□□ -2.29
SCAMP1-205ENST00000614488 MEGF8Q7Z7M0 2845 aa0.73□□□□□ -2.29
SCAMP1-205ENST00000614488 COL6A5A8TX70 2615 aa0.72□□□□□ -2.29
SCAMP1-205ENST00000614488 RYR1P21817 5038 aa0.72□□□□□ -2.29
SCAMP1-205ENST00000614488 K7EQZ3 153 aa0.72□□□□□ -2.29
SCAMP1-205ENST00000614488 PRRC2CQ9Y520 2896 aaKnown RBP0.72□□□□□ -2.29
SCAMP1-205ENST00000614488 UTP20O75691 2785 aaKnown RBP0.72□□□□□ -2.29
SCAMP1-205ENST00000614488 HERC2O95714 4834 aa0.72□□□□□ -2.29
SCAMP1-205ENST00000614488 CENPEQ02224 2701 aa0.72□□□□□ -2.29
SCAMP1-205ENST00000614488 ACANP16112 2415 aa0.72□□□□□ -2.29
SCAMP1-205ENST00000614488 RYR2Q92736 4967 aa0.71□□□□□ -2.3
SCAMP1-205ENST00000614488 PRKDCP78527 4128 aaKnown RBP0.71□□□□□ -2.3
SCAMP1-205ENST00000614488 DCHS2Q6V1P9 2916 aa0.71□□□□□ -2.3
SCAMP1-205ENST00000614488 LCE6AA0A183 80 aa0.71□□□□□ -2.3
SCAMP1-205ENST00000614488 CPSF4LA6NMK7 179 aaKnown RBP0.71□□□□□ -2.3
SCAMP1-205ENST00000614488 I3L3M4 83 aa0.71□□□□□ -2.3
SCAMP1-205ENST00000614488 NDUFA4O00483 81 aa0.71□□□□□ -2.3
SCAMP1-205ENST00000614488 RPL38P63173 70 aaKnown RBP0.71□□□□□ -2.3
SCAMP1-205ENST00000614488 ENHOQ6UWT2 76 aa0.71□□□□□ -2.3
SCAMP1-205ENST00000614488 Q8IZM0 81 aa0.71□□□□□ -2.3
SCAMP1-205ENST00000614488 USMG5Q96IX5 58 aa0.71□□□□□ -2.3
SCAMP1-205ENST00000614488 MXRA5Q9NR99 2828 aa0.71□□□□□ -2.3
SCAMP1-205ENST00000614488 USF3Q68DE3 2245 aa0.7□□□□□ -2.3
SCAMP1-205ENST00000614488 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.7□□□□□ -2.3
SCAMP1-205ENST00000614488 PKDREJQ9NTG1 2253 aa0.7□□□□□ -2.3
SCAMP1-205ENST00000614488 MGAM2Q2M2H8 2515 aa0.7□□□□□ -2.3
SCAMP1-205ENST00000614488 SVEP1Q4LDE5 3571 aa0.7□□□□□ -2.3
SCAMP1-205ENST00000614488 TGP01266 2768 aa0.69□□□□□ -2.3
SCAMP1-205ENST00000614488 DNAH1Q9P2D7 4330 aa0.69□□□□□ -2.3
SCAMP1-205ENST00000614488 LINC01549A6NIU2 74 aa0.69□□□□□ -2.3
SCAMP1-205ENST00000614488 CD52P31358 61 aa0.69□□□□□ -2.3
SCAMP1-205ENST00000614488 MRPL34Q9BQ48 92 aaKnown RBP0.69□□□□□ -2.3
SCAMP1-205ENST00000614488 FLNAP21333 2647 aaKnown RBP0.69□□□□□ -2.3
SCAMP1-205ENST00000614488 VPS13CQ709C8 3753 aa0.69□□□□□ -2.3
SCAMP1-205ENST00000614488 ANK3Q12955 4377 aaKnown RBP0.69□□□□□ -2.3
SCAMP1-205ENST00000614488 TRRAPQ9Y4A5 3859 aa0.69□□□□□ -2.3
SCAMP1-205ENST00000614488 ABCA13Q86UQ4 5058 aa0.69□□□□□ -2.3
SCAMP1-205ENST00000614488 NBEAL2Q6ZNJ1 2754 aa0.68□□□□□ -2.3
SCAMP1-205ENST00000614488 TACC2O95359 2948 aa0.68□□□□□ -2.3
SCAMP1-205ENST00000614488 TLN2Q9Y4G6 2542 aa0.68□□□□□ -2.3
SCAMP1-205ENST00000614488 GPR98Q8WXG9 6306 aa0.68□□□□□ -2.3
SCAMP1-205ENST00000614488 MAP1AP78559 2803 aaPredicted RBP0.68□□□□□ -2.3
SCAMP1-205ENST00000614488 KIAA1109Q2LD37 5005 aa0.67□□□□□ -2.3
SCAMP1-205ENST00000614488 SONP18583 2426 aaKnown RBP0.67□□□□□ -2.3
SCAMP1-205ENST00000614488 WNK1Q9H4A3 2382 aa0.67□□□□□ -2.3
SCAMP1-205ENST00000614488 COX6B1P14854 86 aa0.67□□□□□ -2.3
SCAMP1-205ENST00000614488 APLNQ9ULZ1 77 aa0.67□□□□□ -2.3
SCAMP1-205ENST00000614488 U3KQA8 63 aa0.67□□□□□ -2.3
SCAMP1-205ENST00000614488 KNL1Q8NG31 2342 aa0.67□□□□□ -2.3
SCAMP1-205ENST00000614488 SACSQ9NZJ4 4579 aa0.67□□□□□ -2.3
SCAMP1-205ENST00000614488 ZANQ9Y493 2812 aa0.67□□□□□ -2.3
SCAMP1-205ENST00000614488 TNCP24821 2201 aa0.66□□□□□ -2.3
SCAMP1-205ENST00000614488 DYNC2H1Q8NCM8 4307 aaKnown RBP0.66□□□□□ -2.3
SCAMP1-205ENST00000614488 SPRR1AP35321 89 aa0.66□□□□□ -2.3
SCAMP1-205ENST00000614488 LELP1Q5T871 98 aa0.66□□□□□ -2.3
SCAMP1-205ENST00000614488 UBL5Q9BZL1 73 aa0.66□□□□□ -2.3
SCAMP1-205ENST00000614488 VWFP04275 2813 aa0.65□□□□□ -2.3
SCAMP1-205ENST00000614488 SPRR1BP22528 89 aa0.65□□□□□ -2.31
SCAMP1-205ENST00000614488 TFF3Q07654 80 aa0.65□□□□□ -2.31
SCAMP1-205ENST00000614488 FXYD6Q9H0Q3 95 aa0.65□□□□□ -2.31
SCAMP1-205ENST00000614488 HERC1Q15751 4861 aa0.65□□□□□ -2.31
SCAMP1-205ENST00000614488 CMYA5Q8N3K9 4069 aa0.64□□□□□ -2.31
SCAMP1-205ENST00000614488 NDUFA3O95167 84 aa0.64□□□□□ -2.31
SCAMP1-205ENST00000614488 KLK9Q2XQG4 91 aa0.64□□□□□ -2.31
SCAMP1-205ENST00000614488 H1FX-AS1Q4G0G2 97 aa0.64□□□□□ -2.31
SCAMP1-205ENST00000614488 DEFB105AQ8NG35 78 aa0.64□□□□□ -2.31
SCAMP1-205ENST00000614488 SMR3AQ99954 134 aa0.64□□□□□ -2.31
SCAMP1-205ENST00000614488 TENM2Q9NT68 2774 aa0.64□□□□□ -2.31
SCAMP1-205ENST00000614488 LYSTQ99698 3801 aa0.64□□□□□ -2.31
SCAMP1-205ENST00000614488 COL7A1Q02388 2944 aa0.64□□□□□ -2.31
SCAMP1-205ENST00000614488 MUC2Q02817 5179 aa0.63□□□□□ -2.31
SCAMP1-205ENST00000614488 K7EMI3 77 aa0.63□□□□□ -2.31
SCAMP1-205ENST00000614488 CCL22O00626 93 aa0.63□□□□□ -2.31
SCAMP1-205ENST00000614488 FCER1GP30273 86 aa0.63□□□□□ -2.31
SCAMP1-205ENST00000614488 Q5VSD8 79 aa0.63□□□□□ -2.31
SCAMP1-205ENST00000614488 FRAS1Q86XX4 4008 aa0.63□□□□□ -2.31
SCAMP1-205ENST00000614488 AKAP6Q13023 2319 aa0.63□□□□□ -2.31
SCAMP1-205ENST00000614488 DNAH9Q9NYC9 4486 aa0.62□□□□□ -2.31
SCAMP1-205ENST00000614488 HRNRQ86YZ3 2850 aaPredicted RBP0.62□□□□□ -2.31
SCAMP1-205ENST00000614488 HMCN2Q8NDA2 5059 aa0.62□□□□□ -2.31
SCAMP1-205ENST00000614488 CRIP1P50238 77 aa0.62□□□□□ -2.31
SCAMP1-205ENST00000614488 DEFB109BQ30KR1 87 aa0.62□□□□□ -2.31
SCAMP1-205ENST00000614488 KCNQ1DNQ9H478 68 aa0.62□□□□□ -2.31
SCAMP1-205ENST00000614488 RNF213Q63HN8 5207 aa0.62□□□□□ -2.31
SCAMP1-205ENST00000614488 FAT4Q6V0I7 4981 aa0.62□□□□□ -2.31
SCAMP1-205ENST00000614488 CSMD3Q7Z407 3707 aa0.61□□□□□ -2.31
SCAMP1-205ENST00000614488 HUWE1Q7Z6Z7 4374 aaKnown RBP0.61□□□□□ -2.31
SCAMP1-205ENST00000614488 ETDCA0A1B0GVM5 59 aa0.61□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms