RNA–Protein interactions for RNA: ENST00000614237.1

SENP3-EIF4A1-201, Transcript of SENP3-EIF4A1 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2 BASIC

Gene SENP3-EIF4A1, Length 3,519 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-EIF4A1-201ENST00000614237 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.58□□□□□ -1.36
SENP3-EIF4A1-201ENST00000614237 ZNF706Q9Y5V0 76 aaPredicted RBP6.57□□□□□ -1.36
SENP3-EIF4A1-201ENST00000614237 A8MWP4 228 aa6.56□□□□□ -1.36
SENP3-EIF4A1-201ENST00000614237 KRTAP29-1A8MX34 341 aaPredicted RBP6.56□□□□□ -1.36
SENP3-EIF4A1-201ENST00000614237 IGLV5-52A0A0A0MRZ9 124 aa6.56□□□□□ -1.36
SENP3-EIF4A1-201ENST00000614237 LOC101927531A0A1B0GV80 90 aa6.55□□□□□ -1.36
SENP3-EIF4A1-201ENST00000614237 RTL8CO15255 209 aa6.55□□□□□ -1.36
SENP3-EIF4A1-201ENST00000614237 ADM2Q7Z4H4 148 aa6.55□□□□□ -1.36
SENP3-EIF4A1-201ENST00000614237 FLG2Q5D862 2391 aaPredicted RBP6.53□□□□□ -1.36
SENP3-EIF4A1-201ENST00000614237 MOBPQ13875 183 aa6.53□□□□□ -1.36
SENP3-EIF4A1-201ENST00000614237 ASB16-AS1Q495Z4 193 aa6.53□□□□□ -1.36
SENP3-EIF4A1-201ENST00000614237 DNAH8Q96JB1 4490 aa6.52□□□□□ -1.36
SENP3-EIF4A1-201ENST00000614237 A0A087X002 238 aa6.52□□□□□ -1.37
SENP3-EIF4A1-201ENST00000614237 ATP11AUNQ6ZP68 121 aa6.52□□□□□ -1.37
SENP3-EIF4A1-201ENST00000614237 NOTCH2NLQ7Z3S9 236 aa6.52□□□□□ -1.37
SENP3-EIF4A1-201ENST00000614237 ALMS1Q8TCU4 4167 aa6.51□□□□□ -1.37
SENP3-EIF4A1-201ENST00000614237 H3BPC8 53 aa6.51□□□□□ -1.37
SENP3-EIF4A1-201ENST00000614237 C1orf134Q5TEV5 83 aa6.51□□□□□ -1.37
SENP3-EIF4A1-201ENST00000614237 MMP24-AS1A0A0U1RRL7 71 aa6.51□□□□□ -1.37
SENP3-EIF4A1-201ENST00000614237 ZNF861PO60384 105 aa6.51□□□□□ -1.37
SENP3-EIF4A1-201ENST00000614237 WWC2-AS2Q96NR7 200 aa6.5□□□□□ -1.37
SENP3-EIF4A1-201ENST00000614237 Q96NJ1 140 aa6.5□□□□□ -1.37
SENP3-EIF4A1-201ENST00000614237 PSORS1C2Q9UIG4 136 aa6.5□□□□□ -1.37
SENP3-EIF4A1-201ENST00000614237 HRES1P13985 223 aa6.49□□□□□ -1.37
SENP3-EIF4A1-201ENST00000614237 DMBT1Q9UGM3 2413 aaPredicted RBP6.49□□□□□ -1.37
SENP3-EIF4A1-201ENST00000614237 FRAS1Q86XX4 4008 aa6.48□□□□□ -1.37
SENP3-EIF4A1-201ENST00000614237 Q75L30 129 aa6.48□□□□□ -1.37
SENP3-EIF4A1-201ENST00000614237 SPANXA2-OT1Q8N9U9 137 aa6.47□□□□□ -1.37
SENP3-EIF4A1-201ENST00000614237 CDC42SE1Q9NRR8 79 aa6.47□□□□□ -1.37
SENP3-EIF4A1-201ENST00000614237 KMT2AQ03164 3969 aa6.47□□□□□ -1.37
SENP3-EIF4A1-201ENST00000614237 IGLV7-46A0A075B6I9 117 aa6.46□□□□□ -1.37
SENP3-EIF4A1-201ENST00000614237 C8orf17Q9NRJ1 99 aa6.46□□□□□ -1.38
SENP3-EIF4A1-201ENST00000614237 A6NN06 94 aa6.45□□□□□ -1.38
SENP3-EIF4A1-201ENST00000614237 SPINK1P00995 79 aa6.45□□□□□ -1.38
SENP3-EIF4A1-201ENST00000614237 C7orf65Q6ZTY9 151 aa6.45□□□□□ -1.38
SENP3-EIF4A1-201ENST00000614237 CIRBP-AS1Q8TBR5 109 aa6.45□□□□□ -1.38
SENP3-EIF4A1-201ENST00000614237 Q6ZSA8 131 aa6.45□□□□□ -1.38
SENP3-EIF4A1-201ENST00000614237 LINC00313P59037 77 aa6.44□□□□□ -1.38
SENP3-EIF4A1-201ENST00000614237 IGLV7-43P04211 117 aa6.44□□□□□ -1.38
SENP3-EIF4A1-201ENST00000614237 H3BS24 57 aa6.43□□□□□ -1.38
SENP3-EIF4A1-201ENST00000614237 DNAH11Q96DT5 4516 aa6.43□□□□□ -1.38
SENP3-EIF4A1-201ENST00000614237 TP53AIP1Q9HCN2 124 aa6.41□□□□□ -1.38
SENP3-EIF4A1-201ENST00000614237 SSBP3-AS1Q7Z2R9 100 aa6.4□□□□□ -1.38
SENP3-EIF4A1-201ENST00000614237 Q5W150 140 aa6.4□□□□□ -1.39
SENP3-EIF4A1-201ENST00000614237 DNAH5Q8TE73 4624 aa6.39□□□□□ -1.39
SENP3-EIF4A1-201ENST00000614237 PKD1P98161 4303 aa6.39□□□□□ -1.39
SENP3-EIF4A1-201ENST00000614237 MRPL34Q9BQ48 92 aaKnown RBP6.39□□□□□ -1.39
SENP3-EIF4A1-201ENST00000614237 LINC01558Q9Y6Z2 57 aa6.39□□□□□ -1.39
SENP3-EIF4A1-201ENST00000614237 A0A1B0GVX0 72 aa6.37□□□□□ -1.39
SENP3-EIF4A1-201ENST00000614237 IGKV2D-30A0A075B6S6 120 aa6.37□□□□□ -1.39
SENP3-EIF4A1-201ENST00000614237 A0A1B0GU69 56 aa6.37□□□□□ -1.39
SENP3-EIF4A1-201ENST00000614237 IGKV2-30P06310 120 aa6.37□□□□□ -1.39
SENP3-EIF4A1-201ENST00000614237 LY6G6CO95867 125 aa6.36□□□□□ -1.39
SENP3-EIF4A1-201ENST00000614237 FAT2Q9NYQ8 4349 aa6.36□□□□□ -1.39
SENP3-EIF4A1-201ENST00000614237 C8orf87E5RJ46 101 aa6.35□□□□□ -1.39
SENP3-EIF4A1-201ENST00000614237 KRTAP10-2P60368 255 aa6.34□□□□□ -1.39
SENP3-EIF4A1-201ENST00000614237 ACYP2P14621 99 aa6.3□□□□□ -1.4
SENP3-EIF4A1-201ENST00000614237 KRTAP10-1P60331 282 aa6.29□□□□□ -1.4
SENP3-EIF4A1-201ENST00000614237 CRIPTQ9P021 101 aa6.28□□□□□ -1.4
SENP3-EIF4A1-201ENST00000614237 CSAG1Q6PB30 78 aa6.28□□□□□ -1.4
SENP3-EIF4A1-201ENST00000614237 KRTAP13-3Q3SY46 172 aa6.27□□□□□ -1.41
SENP3-EIF4A1-201ENST00000614237 MIR22HGQ0VDD5 57 aa6.26□□□□□ -1.41
SENP3-EIF4A1-201ENST00000614237 KRTAP1-4P0C5Y4 121 aa6.25□□□□□ -1.41
SENP3-EIF4A1-201ENST00000614237 KRTAP13-2Q52LG2 175 aa6.25□□□□□ -1.41
SENP3-EIF4A1-201ENST00000614237 LINC01554Q52M75 96 aa6.24□□□□□ -1.41
SENP3-EIF4A1-201ENST00000614237 Q8N1X5 172 aa6.24□□□□□ -1.41
SENP3-EIF4A1-201ENST00000614237 RPS29P62273 56 aaKnown RBP6.23□□□□□ -1.41
SENP3-EIF4A1-201ENST00000614237 KMT2CQ8NEZ4 4911 aaKnown RBP6.23□□□□□ -1.41
SENP3-EIF4A1-201ENST00000614237 SACSQ9NZJ4 4579 aa6.22□□□□□ -1.41
SENP3-EIF4A1-201ENST00000614237 HYDINQ4G0P3 5121 aa6.21□□□□□ -1.42
SENP3-EIF4A1-201ENST00000614237 LRP1BQ9NZR2 4599 aa6.21□□□□□ -1.42
SENP3-EIF4A1-201ENST00000614237 UQCR11O14957 56 aa6.19□□□□□ -1.42
SENP3-EIF4A1-201ENST00000614237 KRTAP16-1A8MUX0 517 aa6.17□□□□□ -1.42
SENP3-EIF4A1-201ENST00000614237 VPS13BQ7Z7G8 4022 aa6.15□□□□□ -1.43
SENP3-EIF4A1-201ENST00000614237 A0A1B0GVY2 172 aa6.15□□□□□ -1.43
SENP3-EIF4A1-201ENST00000614237 FAM229AH3BQW9 127 aa6.13□□□□□ -1.43
SENP3-EIF4A1-201ENST00000614237 PKHD1L1Q86WI1 4243 aa6.11□□□□□ -1.43
SENP3-EIF4A1-201ENST00000614237 DMAC1Q96GE9 116 aa6.1□□□□□ -1.43
SENP3-EIF4A1-201ENST00000614237 RYR3Q15413 4870 aa6.1□□□□□ -1.43
SENP3-EIF4A1-201ENST00000614237 PLA2G1BP04054 148 aaKnown RBP6.09□□□□□ -1.43
SENP3-EIF4A1-201ENST00000614237 KRTAP10-4P60372 401 aaPredicted RBP6.09□□□□□ -1.43
SENP3-EIF4A1-201ENST00000614237 RYR2Q92736 4967 aa6.08□□□□□ -1.44
SENP3-EIF4A1-201ENST00000614237 TYMSOSQ8TAI1 123 aa6.08□□□□□ -1.44
SENP3-EIF4A1-201ENST00000614237 SPATA8Q6RVD6 105 aa6.07□□□□□ -1.44
SENP3-EIF4A1-201ENST00000614237 APOBP04114 4563 aaKnown RBP6.06□□□□□ -1.44
SENP3-EIF4A1-201ENST00000614237 PKHD1P08F94 4074 aa6.05□□□□□ -1.44
SENP3-EIF4A1-201ENST00000614237 DYNC1H1Q14204 4646 aaKnown RBP6.05□□□□□ -1.44
SENP3-EIF4A1-201ENST00000614237 C9orf92A6NGG3 77 aa6.04□□□□□ -1.44
SENP3-EIF4A1-201ENST00000614237 LINC00304Q8N9R0 145 aa6.02□□□□□ -1.45
SENP3-EIF4A1-201ENST00000614237 A0A0D9SG42 100 aa5.96□□□□□ -1.46
SENP3-EIF4A1-201ENST00000614237 C20orf166-AS1Q96NR2 134 aa5.96□□□□□ -1.46
SENP3-EIF4A1-201ENST00000614237 A8MUU9 505 aa5.95□□□□□ -1.46
SENP3-EIF4A1-201ENST00000614237 SMR3BP02814 79 aaPredicted RBP5.91□□□□□ -1.46
SENP3-EIF4A1-201ENST00000614237 H0YAA0 97 aa5.91□□□□□ -1.46
SENP3-EIF4A1-201ENST00000614237 A0A1B0GU33 70 aa5.9□□□□□ -1.46
SENP3-EIF4A1-201ENST00000614237 EPPK1P58107 5090 aaKnown RBP5.9□□□□□ -1.46
SENP3-EIF4A1-201ENST00000614237 SPINT4Q6UDR6 99 aa5.87□□□□□ -1.47
SENP3-EIF4A1-201ENST00000614237 KRTAP10-8P60410 259 aa5.85□□□□□ -1.47
SENP3-EIF4A1-201ENST00000614237 KRTAP25-1Q3LHN0 102 aa5.85□□□□□ -1.47
SENP3-EIF4A1-201ENST00000614237 K7ERS5 55 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms