RNA–Protein interactions for RNA: ENST00000613060.4

SLC6A6-204, Transcript of solute carrier family 6 member 6, humanhuman

TSL 1 (best) BASIC

Gene SLC6A6, Length 6,526 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A6-204ENST00000613060 TACC2O95359 2948 aa6.66□□□□□ -1.34
SLC6A6-204ENST00000613060 ITPR3Q14573 2671 aa6.66□□□□□ -1.34
SLC6A6-204ENST00000613060 PP632Q6XCG6 107 aa6.65□□□□□ -1.34
SLC6A6-204ENST00000613060 RELNP78509 3460 aa6.65□□□□□ -1.35
SLC6A6-204ENST00000613060 ADGRG4Q8IZF6 3080 aa6.65□□□□□ -1.35
SLC6A6-204ENST00000613060 Q6ZRN7 208 aaPredicted RBP6.64□□□□□ -1.35
SLC6A6-204ENST00000613060 NBEAL1Q6ZS30 2694 aa6.63□□□□□ -1.35
SLC6A6-204ENST00000613060 LRBAP50851 2863 aa6.63□□□□□ -1.35
SLC6A6-204ENST00000613060 KRTAP13-2Q52LG2 175 aa6.61□□□□□ -1.35
SLC6A6-204ENST00000613060 CFAP46Q8IYW2 2715 aa6.6□□□□□ -1.35
SLC6A6-204ENST00000613060 ATMQ13315 3056 aa6.59□□□□□ -1.35
SLC6A6-204ENST00000613060 SETXQ7Z333 2677 aaKnown RBP6.57□□□□□ -1.36
SLC6A6-204ENST00000613060 ZFHX3Q15911 3703 aa6.57□□□□□ -1.36
SLC6A6-204ENST00000613060 KRTAP21-3Q3LHN1 58 aa6.56□□□□□ -1.36
SLC6A6-204ENST00000613060 A6NN06 94 aa6.55□□□□□ -1.36
SLC6A6-204ENST00000613060 DMXL1Q9Y485 3027 aa6.54□□□□□ -1.36
SLC6A6-204ENST00000613060 KRTAP11-1Q8IUC1 163 aa6.53□□□□□ -1.36
SLC6A6-204ENST00000613060 TNRC18O15417 2968 aaPredicted RBP6.49□□□□□ -1.37
SLC6A6-204ENST00000613060 TEP1Q99973 2627 aaKnown RBP6.48□□□□□ -1.37
SLC6A6-204ENST00000613060 CRCT1Q9UGL9 99 aa6.46□□□□□ -1.37
SLC6A6-204ENST00000613060 KRTAP13-1Q8IUC0 172 aa6.46□□□□□ -1.37
SLC6A6-204ENST00000613060 CUBNO60494 3623 aa6.45□□□□□ -1.38
SLC6A6-204ENST00000613060 XP32Q5T750 250 aa6.43□□□□□ -1.38
SLC6A6-204ENST00000613060 AKAP13Q12802 2813 aa6.39□□□□□ -1.39
SLC6A6-204ENST00000613060 KRTAP7-1Q8IUC3 87 aa6.38□□□□□ -1.39
SLC6A6-204ENST00000613060 COL12A1Q99715 3063 aa6.37□□□□□ -1.39
SLC6A6-204ENST00000613060 BSNQ9UPA5 3926 aa6.37□□□□□ -1.39
SLC6A6-204ENST00000613060 ASH1LQ9NR48 2969 aaKnown RBP6.36□□□□□ -1.39
SLC6A6-204ENST00000613060 UNC79Q9P2D8 2635 aa6.36□□□□□ -1.39
SLC6A6-204ENST00000613060 TPRXLQ17RH7 258 aa6.36□□□□□ -1.39
SLC6A6-204ENST00000613060 TEX15Q9BXT5 2789 aa6.35□□□□□ -1.39
SLC6A6-204ENST00000613060 MAP1AP78559 2803 aaPredicted RBP6.35□□□□□ -1.39
SLC6A6-204ENST00000613060 CELSR1Q9NYQ6 3014 aa6.34□□□□□ -1.39
SLC6A6-204ENST00000613060 COL6A5A8TX70 2615 aa6.34□□□□□ -1.39
SLC6A6-204ENST00000613060 DCHS2Q6V1P9 2916 aa6.33□□□□□ -1.4
SLC6A6-204ENST00000613060 NOTCH1P46531 2555 aa6.32□□□□□ -1.4
SLC6A6-204ENST00000613060 VPS13CQ709C8 3753 aa6.31□□□□□ -1.4
SLC6A6-204ENST00000613060 CSMD2Q7Z408 3487 aa6.31□□□□□ -1.4
SLC6A6-204ENST00000613060 CENPEQ02224 2701 aa6.29□□□□□ -1.4
SLC6A6-204ENST00000613060 BAHCC1Q9P281 2608 aa6.28□□□□□ -1.4
SLC6A6-204ENST00000613060 CHD6Q8TD26 2715 aa6.22□□□□□ -1.41
SLC6A6-204ENST00000613060 CRYBG3Q68DQ2 2970 aa6.22□□□□□ -1.41
SLC6A6-204ENST00000613060 KRTAP1-4P0C5Y4 121 aa6.19□□□□□ -1.42
SLC6A6-204ENST00000613060 IGSF10Q6WRI0 2623 aa6.18□□□□□ -1.42
SLC6A6-204ENST00000613060 HRNRQ86YZ3 2850 aaPredicted RBP6.16□□□□□ -1.42
SLC6A6-204ENST00000613060 H0YAA0 97 aa6.13□□□□□ -1.43
SLC6A6-204ENST00000613060 KRTAP12-2P59991 146 aa6.13□□□□□ -1.43
SLC6A6-204ENST00000613060 KRTAP13-3Q3SY46 172 aa6.12□□□□□ -1.43
SLC6A6-204ENST00000613060 NSD1Q96L73 2696 aaPredicted RBP6.1□□□□□ -1.43
SLC6A6-204ENST00000613060 GCN1Q92616 2671 aaKnown RBP6.08□□□□□ -1.44
SLC6A6-204ENST00000613060 KRTAP15-1Q3LI76 137 aa6.08□□□□□ -1.44
SLC6A6-204ENST00000613060 KMT2BQ9UMN6 2715 aaPredicted RBP6.04□□□□□ -1.44
SLC6A6-204ENST00000613060 ZNF292O60281 2723 aa6.02□□□□□ -1.45
SLC6A6-204ENST00000613060 NBEAL2Q6ZNJ1 2754 aa5.97□□□□□ -1.45
SLC6A6-204ENST00000613060 AKAP9Q99996 3911 aa5.97□□□□□ -1.45
SLC6A6-204ENST00000613060 UTP20O75691 2785 aaKnown RBP5.96□□□□□ -1.45
SLC6A6-204ENST00000613060 ITPR1Q14643 2758 aa5.96□□□□□ -1.46
SLC6A6-204ENST00000613060 FBN2P35556 2912 aa5.93□□□□□ -1.46
SLC6A6-204ENST00000613060 LORP23490 312 aaPredicted RBP5.93□□□□□ -1.46
SLC6A6-204ENST00000613060 KRTAP13-4Q3LI77 160 aa5.91□□□□□ -1.46
SLC6A6-204ENST00000613060 ZANQ9Y493 2812 aa5.91□□□□□ -1.46
SLC6A6-204ENST00000613060 UBR5O95071 2799 aaPredicted RBP5.9□□□□□ -1.47
SLC6A6-204ENST00000613060 CELSR2Q9HCU4 2923 aa5.89□□□□□ -1.47
SLC6A6-204ENST00000613060 NBPF19A0A087WUL8 3843 aa5.89□□□□□ -1.47
SLC6A6-204ENST00000613060 KRTAP10-6P60371 365 aaPredicted RBP5.87□□□□□ -1.47
SLC6A6-204ENST00000613060 ITPR2Q14571 2701 aa5.87□□□□□ -1.47
SLC6A6-204ENST00000613060 TENM4Q6N022 2769 aa5.81□□□□□ -1.48
SLC6A6-204ENST00000613060 MXRA5Q9NR99 2828 aa5.76□□□□□ -1.49
SLC6A6-204ENST00000613060 NF1P21359 2839 aa5.76□□□□□ -1.49
SLC6A6-204ENST00000613060 ZNF469Q96JG9 3925 aaPredicted RBP5.76□□□□□ -1.49
SLC6A6-204ENST00000613060 APCP25054 2843 aa5.75□□□□□ -1.49
SLC6A6-204ENST00000613060 FLNCQ14315 2725 aa5.73□□□□□ -1.49
SLC6A6-204ENST00000613060 HIVEP1P15822 2718 aa5.69□□□□□ -1.5
SLC6A6-204ENST00000613060 KRTAP12-1P59990 96 aa5.68□□□□□ -1.5
SLC6A6-204ENST00000613060 NIPBLQ6KC79 2804 aaeCLIP5.66□□□□□ -1.56e-6■□□□□ 9
SLC6A6-204ENST00000613060 KRTAP10-12P60413 245 aa5.59□□□□□ -1.51
SLC6A6-204ENST00000613060 TENM3Q9P273 2699 aa5.58□□□□□ -1.52
SLC6A6-204ENST00000613060 KRTAP10-5P60370 271 aa5.57□□□□□ -1.52
SLC6A6-204ENST00000613060 INE1O15225 51 aa5.56□□□□□ -1.52
SLC6A6-204ENST00000613060 KRTAP8-1Q8IUC2 63 aa5.56□□□□□ -1.52
SLC6A6-204ENST00000613060 CSMD3Q7Z407 3707 aa5.55□□□□□ -1.52
SLC6A6-204ENST00000613060 TRRAPQ9Y4A5 3859 aa5.54□□□□□ -1.52
SLC6A6-204ENST00000613060 ANK3Q12955 4377 aaKnown RBP5.46□□□□□ -1.54
SLC6A6-204ENST00000613060 TENM1Q9UKZ4 2725 aa5.45□□□□□ -1.54
SLC6A6-204ENST00000613060 TENM2Q9NT68 2774 aa5.44□□□□□ -1.54
SLC6A6-204ENST00000613060 PKD1L1Q8TDX9 2849 aa5.43□□□□□ -1.54
SLC6A6-204ENST00000613060 KRTAP3-1Q9BYR8 98 aa5.41□□□□□ -1.54
SLC6A6-204ENST00000613060 VWFP04275 2813 aa5.4□□□□□ -1.54
SLC6A6-204ENST00000613060 KRTAP4-5Q9BYR2 181 aa5.39□□□□□ -1.55
SLC6A6-204ENST00000613060 PDZD2O15018 2839 aa5.36□□□□□ -1.55
SLC6A6-204ENST00000613060 FBN1P35555 2871 aaKnown RBP5.36□□□□□ -1.55
SLC6A6-204ENST00000613060 TGP01266 2768 aa5.34□□□□□ -1.55
SLC6A6-204ENST00000613060 KRTAP12-3P60328 96 aa5.31□□□□□ -1.56
SLC6A6-204ENST00000613060 SRRM2Q9UQ35 2752 aaKnown RBP5.26□□□□□ -1.57
SLC6A6-204ENST00000613060 KRTAP10-7P60409 375 aaPredicted RBP5.26□□□□□ -1.57
SLC6A6-204ENST00000613060 LYSTQ99698 3801 aa5.25□□□□□ -1.57
SLC6A6-204ENST00000613060 SPRR2FQ96RM1 72 aa5.25□□□□□ -1.57
SLC6A6-204ENST00000613060 DNAH10Q8IVF4 4471 aa5.23□□□□□ -1.57
SLC6A6-204ENST00000613060 ANK2Q01484 3957 aa5.22□□□□□ -1.57
SLC6A6-204ENST00000613060 OTOGQ6ZRI0 2925 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms