RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 DNAH8Q96JB1 4490 aa8.84□□□□□ -0.99
CDH1-213ENST00000612417 H0Y9P7 68 aa8.84□□□□□ -0.99
CDH1-213ENST00000612417 PSORS1C2Q9UIG4 136 aa8.84□□□□□ -0.99
CDH1-213ENST00000612417 C8orf87E5RJ46 101 aa8.83□□□□□ -1
CDH1-213ENST00000612417 KRTAP10-1P60331 282 aa8.83□□□□□ -1
CDH1-213ENST00000612417 ASB16-AS1Q495Z4 193 aa8.82□□□□□ -1
CDH1-213ENST00000612417 H3BS24 57 aa8.81□□□□□ -1
CDH1-213ENST00000612417 SPANXA2-OT1Q8N9U9 137 aa8.81□□□□□ -1
CDH1-213ENST00000612417 CIRBP-AS1Q8TBR5 109 aa8.81□□□□□ -1
CDH1-213ENST00000612417 LCA10Q71F78 164 aa8.8□□□□□ -1
CDH1-213ENST00000612417 MOBPQ13875 183 aa8.79□□□□□ -1
CDH1-213ENST00000612417 C7orf65Q6ZTY9 151 aa8.79□□□□□ -1
CDH1-213ENST00000612417 A6NN06 94 aa8.79□□□□□ -1
CDH1-213ENST00000612417 ZNF861PO60384 105 aa8.79□□□□□ -1
CDH1-213ENST00000612417 Q5VV11 94 aa8.78□□□□□ -1
CDH1-213ENST00000612417 A8MUN3 132 aa8.77□□□□□ -1
CDH1-213ENST00000612417 Q6ZSA8 131 aa8.77□□□□□ -1.01
CDH1-213ENST00000612417 LIMD2Q9BT23 127 aa8.76□□□□□ -1.01
CDH1-213ENST00000612417 PRR4Q16378 134 aa8.76□□□□□ -1.01
CDH1-213ENST00000612417 TP53AIP1Q9HCN2 124 aa8.75□□□□□ -1.01
CDH1-213ENST00000612417 C8orf17Q9NRJ1 99 aa8.74□□□□□ -1.01
CDH1-213ENST00000612417 RYR2Q92736 4967 aa8.73□□□□□ -1.01
CDH1-213ENST00000612417 A0A1B0GVX0 72 aa8.73□□□□□ -1.01
CDH1-213ENST00000612417 PKHD1P08F94 4074 aa8.72□□□□□ -1.01
CDH1-213ENST00000612417 KMT2CQ8NEZ4 4911 aaKnown RBP8.72□□□□□ -1.01
CDH1-213ENST00000612417 IGLV7-43P04211 117 aa8.72□□□□□ -1.01
CDH1-213ENST00000612417 CHKB-CPT1BH3BT56 60 aa8.71□□□□□ -1.01
CDH1-213ENST00000612417 SPTSSBQ8NFR3 76 aa8.7□□□□□ -1.02
CDH1-213ENST00000612417 ANAPC11Q9NYG5 84 aa8.69□□□□□ -1.02
CDH1-213ENST00000612417 CDK2AP2O75956 126 aa8.68□□□□□ -1.02
CDH1-213ENST00000612417 IGHV6-1A0A0B4J1U7 121 aa8.67□□□□□ -1.02
CDH1-213ENST00000612417 A0A1B0GVY2 172 aa8.67□□□□□ -1.02
CDH1-213ENST00000612417 A8MU10 97 aa8.67□□□□□ -1.02
CDH1-213ENST00000612417 Q75L30 129 aa8.67□□□□□ -1.02
CDH1-213ENST00000612417 IGLV7-46A0A075B6I9 117 aa8.66□□□□□ -1.02
CDH1-213ENST00000612417 MRPL34Q9BQ48 92 aaKnown RBP8.65□□□□□ -1.02
CDH1-213ENST00000612417 CDC42SE1Q9NRR8 79 aa8.65□□□□□ -1.02
CDH1-213ENST00000612417 LRP1BQ9NZR2 4599 aa8.63□□□□□ -1.03
CDH1-213ENST00000612417 Q8N9P0 234 aaPredicted RBP8.63□□□□□ -1.03
CDH1-213ENST00000612417 DYNC1H1Q14204 4646 aaKnown RBP8.61□□□□□ -1.03
CDH1-213ENST00000612417 VPS13BQ7Z7G8 4022 aa8.61□□□□□ -1.03
CDH1-213ENST00000612417 LOC101927531A0A1B0GV80 90 aa8.61□□□□□ -1.03
CDH1-213ENST00000612417 A0A087X002 238 aa8.6□□□□□ -1.03
CDH1-213ENST00000612417 NOTCH2NLQ7Z3S9 236 aa8.6□□□□□ -1.03
CDH1-213ENST00000612417 PRR26Q8N8Z3 221 aa8.6□□□□□ -1.03
CDH1-213ENST00000612417 SSBP3-AS1Q7Z2R9 100 aa8.6□□□□□ -1.03
CDH1-213ENST00000612417 PRR15LQ9BU68 103 aa8.6□□□□□ -1.03
CDH1-213ENST00000612417 A6NED7 52 aa8.58□□□□□ -1.04
CDH1-213ENST00000612417 PCOTHQ58A44 107 aa8.57□□□□□ -1.04
CDH1-213ENST00000612417 COA5Q86WW8 74 aa8.57□□□□□ -1.04
CDH1-213ENST00000612417 SMR3BP02814 79 aaPredicted RBP8.56□□□□□ -1.04
CDH1-213ENST00000612417 SPINK6Q6UWN8 80 aa8.53□□□□□ -1.04
CDH1-213ENST00000612417 KRTAP13-3Q3SY46 172 aa8.53□□□□□ -1.04
CDH1-213ENST00000612417 LINC01554Q52M75 96 aa8.52□□□□□ -1.05
CDH1-213ENST00000612417 RYR3Q15413 4870 aa8.52□□□□□ -1.05
CDH1-213ENST00000612417 APOBP04114 4563 aaKnown RBP8.49□□□□□ -1.05
CDH1-213ENST00000612417 Q5W150 140 aa8.48□□□□□ -1.05
CDH1-213ENST00000612417 KRTAP13-2Q52LG2 175 aa8.46□□□□□ -1.05
CDH1-213ENST00000612417 PLA2G1BP04054 148 aaKnown RBP8.44□□□□□ -1.06
CDH1-213ENST00000612417 KRTAP1-4P0C5Y4 121 aa8.44□□□□□ -1.06
CDH1-213ENST00000612417 HRES1P13985 223 aa8.44□□□□□ -1.06
CDH1-213ENST00000612417 LINC00313P59037 77 aa8.42□□□□□ -1.06
CDH1-213ENST00000612417 LINC01558Q9Y6Z2 57 aa8.41□□□□□ -1.06
CDH1-213ENST00000612417 FAT1Q14517 4588 aa8.4□□□□□ -1.07
CDH1-213ENST00000612417 FAM229AH3BQW9 127 aa8.39□□□□□ -1.07
CDH1-213ENST00000612417 TYMSOSQ8TAI1 123 aa8.36□□□□□ -1.07
CDH1-213ENST00000612417 KRTAP10-4P60372 401 aaPredicted RBP8.36□□□□□ -1.07
CDH1-213ENST00000612417 KRTAP16-1A8MUX0 517 aa8.35□□□□□ -1.07
CDH1-213ENST00000612417 SPAG11AQ6PDA7 123 aa8.35□□□□□ -1.07
CDH1-213ENST00000612417 ACYP2P14621 99 aa8.32□□□□□ -1.08
CDH1-213ENST00000612417 IGKV2-30P06310 120 aa8.31□□□□□ -1.08
CDH1-213ENST00000612417 DMAC1Q96GE9 116 aa8.31□□□□□ -1.08
CDH1-213ENST00000612417 PRAC1Q96KF2 57 aa8.3□□□□□ -1.08
CDH1-213ENST00000612417 Q5VSD8 79 aa8.28□□□□□ -1.08
CDH1-213ENST00000612417 HSPG2P98160 4391 aa8.28□□□□□ -1.08
CDH1-213ENST00000612417 SPINK1P00995 79 aa8.26□□□□□ -1.09
CDH1-213ENST00000612417 RYR1P21817 5038 aa8.25□□□□□ -1.09
CDH1-213ENST00000612417 LINC00304Q8N9R0 145 aa8.25□□□□□ -1.09
CDH1-213ENST00000612417 SPINK7P58062 85 aa8.25□□□□□ -1.09
CDH1-213ENST00000612417 RETNLBQ9BQ08 111 aa8.24□□□□□ -1.09
CDH1-213ENST00000612417 PKHD1L1Q86WI1 4243 aa8.23□□□□□ -1.09
CDH1-213ENST00000612417 RPS29P62273 56 aaKnown RBP8.22□□□□□ -1.09
CDH1-213ENST00000612417 EPPK1P58107 5090 aaKnown RBP8.2□□□□□ -1.1
CDH1-213ENST00000612417 KIAA1109Q2LD37 5005 aa8.16□□□□□ -1.1
CDH1-213ENST00000612417 ADM2Q7Z4H4 148 aa8.15□□□□□ -1.1
CDH1-213ENST00000612417 IGKV2D-30A0A075B6S6 120 aa8.15□□□□□ -1.11
CDH1-213ENST00000612417 KRTAP17-1Q9BYP8 105 aa8.15□□□□□ -1.11
CDH1-213ENST00000612417 Q8N1X5 172 aa8.13□□□□□ -1.11
CDH1-213ENST00000612417 FLG2Q5D862 2391 aaPredicted RBP8.11□□□□□ -1.11
CDH1-213ENST00000612417 LRP1Q07954 4544 aaKnown RBP8.1□□□□□ -1.11
CDH1-213ENST00000612417 A0A1B0GU69 56 aa8.06□□□□□ -1.12
CDH1-213ENST00000612417 KRTAP10-8P60410 259 aa8.06□□□□□ -1.12
CDH1-213ENST00000612417 TNXBP22105 4242 aa8.05□□□□□ -1.12
CDH1-213ENST00000612417 SPATA8Q6RVD6 105 aa8.03□□□□□ -1.12
CDH1-213ENST00000612417 FAT3Q8TDW7 4589 aa8.03□□□□□ -1.12
CDH1-213ENST00000612417 CSAG1Q6PB30 78 aa8.02□□□□□ -1.13
CDH1-213ENST00000612417 C20orf166-AS1Q96NR2 134 aa8□□□□□ -1.13
CDH1-213ENST00000612417 DMBT1Q9UGM3 2413 aaPredicted RBP8□□□□□ -1.13
CDH1-213ENST00000612417 A8MUU9 505 aa7.99□□□□□ -1.13
CDH1-213ENST00000612417 MYCBP2O75592 4640 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 222.6 ms