RNA–Protein interactions for RNA: ENST00000606299.1

CSNK1A1-209, Transcript of casein kinase 1 alpha 1, humanhuman

TSL 3 BASIC

Gene CSNK1A1, Length 1,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-209ENST00000606299 DYNC1H1Q14204 4646 aaKnown RBP5.8□□□□□ -1.48
CSNK1A1-209ENST00000606299 SPINK6Q6UWN8 80 aa5.79□□□□□ -1.48
CSNK1A1-209ENST00000606299 VPS13BQ7Z7G8 4022 aa5.78□□□□□ -1.48
CSNK1A1-209ENST00000606299 A0A087WVE0 104 aa5.78□□□□□ -1.48
CSNK1A1-209ENST00000606299 A0A087X002 238 aa5.78□□□□□ -1.48
CSNK1A1-209ENST00000606299 FAM236AA0A1B0GUQ0 79 aa5.78□□□□□ -1.48
CSNK1A1-209ENST00000606299 FAM236BA0A1B0GV22 79 aa5.78□□□□□ -1.48
CSNK1A1-209ENST00000606299 FAM229BQ4G0N7 80 aa5.78□□□□□ -1.48
CSNK1A1-209ENST00000606299 KRTAP1-4P0C5Y4 121 aa5.77□□□□□ -1.49
CSNK1A1-209ENST00000606299 APOBP04114 4563 aaKnown RBP5.76□□□□□ -1.49
CSNK1A1-209ENST00000606299 DEFB116Q30KQ4 102 aa5.76□□□□□ -1.49
CSNK1A1-209ENST00000606299 KRTAP13-2Q52LG2 175 aa5.76□□□□□ -1.49
CSNK1A1-209ENST00000606299 SSBP3-AS1Q7Z2R9 100 aa5.75□□□□□ -1.49
CSNK1A1-209ENST00000606299 Q8N9L7 120 aa5.75□□□□□ -1.49
CSNK1A1-209ENST00000606299 IGKV4-1P06312 121 aa5.74□□□□□ -1.49
CSNK1A1-209ENST00000606299 KRTAP10-4P60372 401 aaPredicted RBP5.74□□□□□ -1.49
CSNK1A1-209ENST00000606299 PKHD1L1Q86WI1 4243 aa5.74□□□□□ -1.49
CSNK1A1-209ENST00000606299 SS18L2Q9UHA2 77 aa5.73□□□□□ -1.49
CSNK1A1-209ENST00000606299 CDK2AP2O75956 126 aa5.72□□□□□ -1.49
CSNK1A1-209ENST00000606299 TYMSOSQ8TAI1 123 aa5.72□□□□□ -1.49
CSNK1A1-209ENST00000606299 ANAPC13Q9BS18 74 aa5.72□□□□□ -1.49
CSNK1A1-209ENST00000606299 DSCR10P59022 87 aa5.71□□□□□ -1.5
CSNK1A1-209ENST00000606299 CD164Q04900 197 aa5.71□□□□□ -1.5
CSNK1A1-209ENST00000606299 LINC00472Q9H8W2 130 aa5.71□□□□□ -1.5
CSNK1A1-209ENST00000606299 K7EQZ3 153 aa5.7□□□□□ -1.5
CSNK1A1-209ENST00000606299 Q5VSD8 79 aa5.7□□□□□ -1.5
CSNK1A1-209ENST00000606299 ATOX1O00244 68 aa5.69□□□□□ -1.5
CSNK1A1-209ENST00000606299 Q96NJ1 140 aa5.69□□□□□ -1.5
CSNK1A1-209ENST00000606299 RYR3Q15413 4870 aa5.69□□□□□ -1.5
CSNK1A1-209ENST00000606299 J3KT08 172 aa5.68□□□□□ -1.5
CSNK1A1-209ENST00000606299 A8MWP4 228 aa5.67□□□□□ -1.5
CSNK1A1-209ENST00000606299 NDUFB1O75438 58 aa5.65□□□□□ -1.5
CSNK1A1-209ENST00000606299 LINC00304Q8N9R0 145 aa5.65□□□□□ -1.5
CSNK1A1-209ENST00000606299 HSPG2P98160 4391 aa5.64□□□□□ -1.51
CSNK1A1-209ENST00000606299 HCG22E2RYF7 251 aa5.64□□□□□ -1.51
CSNK1A1-209ENST00000606299 WFDC13Q8IUB5 93 aa5.64□□□□□ -1.51
CSNK1A1-209ENST00000606299 PRR15Q8IV56 129 aa5.64□□□□□ -1.51
CSNK1A1-209ENST00000606299 LIMD2Q9BT23 127 aa5.64□□□□□ -1.51
CSNK1A1-209ENST00000606299 ASB16-AS1Q495Z4 193 aa5.63□□□□□ -1.51
CSNK1A1-209ENST00000606299 FAT1Q14517 4588 aa5.62□□□□□ -1.51
CSNK1A1-209ENST00000606299 IGHV6-1A0A0B4J1U7 121 aa5.61□□□□□ -1.51
CSNK1A1-209ENST00000606299 A0A1B0GVX0 72 aa5.61□□□□□ -1.51
CSNK1A1-209ENST00000606299 SPINK1P00995 79 aa5.61□□□□□ -1.51
CSNK1A1-209ENST00000606299 CCDC179H3BU77 68 aa5.6□□□□□ -1.51
CSNK1A1-209ENST00000606299 C1orf195Q5TG92 126 aa5.6□□□□□ -1.51
CSNK1A1-209ENST00000606299 Q5XG85 94 aa5.6□□□□□ -1.51
CSNK1A1-209ENST00000606299 SPAG11AQ6PDA7 123 aa5.6□□□□□ -1.51
CSNK1A1-209ENST00000606299 CASC2Q6XLA1 102 aa5.6□□□□□ -1.51
CSNK1A1-209ENST00000606299 SERP2Q8N6R1 65 aa5.6□□□□□ -1.51
CSNK1A1-209ENST00000606299 TRAV7A0A075B6U4 112 aa5.59□□□□□ -1.51
CSNK1A1-209ENST00000606299 MMP24-AS1A0A0U1RRL7 71 aa5.59□□□□□ -1.51
CSNK1A1-209ENST00000606299 COX7CP15954 63 aa5.59□□□□□ -1.51
CSNK1A1-209ENST00000606299 SMIM20Q8N5G0 67 aa5.59□□□□□ -1.51
CSNK1A1-209ENST00000606299 C8orf17Q9NRJ1 99 aa5.59□□□□□ -1.51
CSNK1A1-209ENST00000606299 UQCRQO14949 82 aa5.57□□□□□ -1.52
CSNK1A1-209ENST00000606299 hDV103S1A0JD37 113 aa5.56□□□□□ -1.52
CSNK1A1-209ENST00000606299 KRTAP10-5P60370 271 aa5.56□□□□□ -1.52
CSNK1A1-209ENST00000606299 RPS29P62273 56 aaKnown RBP5.56□□□□□ -1.52
CSNK1A1-209ENST00000606299 RYR1P21817 5038 aa5.55□□□□□ -1.52
CSNK1A1-209ENST00000606299 NOTCH2NLQ7Z3S9 236 aa5.55□□□□□ -1.52
CSNK1A1-209ENST00000606299 OCR1Q9BZK8 76 aa5.55□□□□□ -1.52
CSNK1A1-209ENST00000606299 C8orf87E5RJ46 101 aa5.53□□□□□ -1.52
CSNK1A1-209ENST00000606299 NDUFS5O43920 106 aa5.52□□□□□ -1.53
CSNK1A1-209ENST00000606299 TMEM254Q8TBM7 123 aa5.52□□□□□ -1.53
CSNK1A1-209ENST00000606299 FLG2Q5D862 2391 aaPredicted RBP5.52□□□□□ -1.53
CSNK1A1-209ENST00000606299 LINC00313P59037 77 aa5.51□□□□□ -1.53
CSNK1A1-209ENST00000606299 KRTAP10-8P60410 259 aa5.51□□□□□ -1.53
CSNK1A1-209ENST00000606299 C20orf197Q8N268 126 aa5.51□□□□□ -1.53
CSNK1A1-209ENST00000606299 MRPL34Q9BQ48 92 aaKnown RBP5.51□□□□□ -1.53
CSNK1A1-209ENST00000606299 EPPK1P58107 5090 aaKnown RBP5.51□□□□□ -1.53
CSNK1A1-209ENST00000606299 RETNLBQ9BQ08 111 aa5.5□□□□□ -1.53
CSNK1A1-209ENST00000606299 SNURFQ9Y675 71 aa5.49□□□□□ -1.53
CSNK1A1-209ENST00000606299 KIAA1109Q2LD37 5005 aa5.49□□□□□ -1.53
CSNK1A1-209ENST00000606299 SEC61BP60468 96 aaKnown RBP5.48□□□□□ -1.53
CSNK1A1-209ENST00000606299 CYSTM1Q9H1C7 97 aa5.47□□□□□ -1.53
CSNK1A1-209ENST00000606299 TNXBP22105 4242 aa5.47□□□□□ -1.53
CSNK1A1-209ENST00000606299 H0Y9P7 68 aa5.46□□□□□ -1.54
CSNK1A1-209ENST00000606299 MT1HL1P0DM35 61 aa5.45□□□□□ -1.54
CSNK1A1-209ENST00000606299 MP68P56378 58 aa5.45□□□□□ -1.54
CSNK1A1-209ENST00000606299 C5orf47Q569G3 176 aa5.45□□□□□ -1.54
CSNK1A1-209ENST00000606299 TP53AIP1Q9HCN2 124 aa5.45□□□□□ -1.54
CSNK1A1-209ENST00000606299 FAT3Q8TDW7 4589 aa5.45□□□□□ -1.54
CSNK1A1-209ENST00000606299 A0A0U1RQV1 116 aa5.44□□□□□ -1.54
CSNK1A1-209ENST00000606299 TRAV22A0A0B4J277 110 aa5.43□□□□□ -1.54
CSNK1A1-209ENST00000606299 C9orf92A6NGG3 77 aa5.43□□□□□ -1.54
CSNK1A1-209ENST00000606299 KRTAP16-1A8MUX0 517 aa5.43□□□□□ -1.54
CSNK1A1-209ENST00000606299 OXTP01178 125 aa5.43□□□□□ -1.54
CSNK1A1-209ENST00000606299 KLKP1Q107X0 134 aa5.43□□□□□ -1.54
CSNK1A1-209ENST00000606299 LRP1Q07954 4544 aaKnown RBP5.42□□□□□ -1.54
CSNK1A1-209ENST00000606299 LINC00208Q96KT6 92 aa5.42□□□□□ -1.54
CSNK1A1-209ENST00000606299 DMBT1Q9UGM3 2413 aaPredicted RBP5.41□□□□□ -1.54
CSNK1A1-209ENST00000606299 LCE1FQ5T754 118 aa5.41□□□□□ -1.54
CSNK1A1-209ENST00000606299 KRTAP10-12P60413 245 aa5.4□□□□□ -1.54
CSNK1A1-209ENST00000606299 H3BPC8 53 aa5.39□□□□□ -1.55
CSNK1A1-209ENST00000606299 C1orf64Q8NEQ6 169 aa5.39□□□□□ -1.55
CSNK1A1-209ENST00000606299 H7BZZ5 65 aa5.38□□□□□ -1.55
CSNK1A1-209ENST00000606299 NDUFC1O43677 76 aa5.38□□□□□ -1.55
CSNK1A1-209ENST00000606299 ZCCHC13Q8WW36 166 aaKnown RBP5.38□□□□□ -1.55
CSNK1A1-209ENST00000606299 TMEM258P61165 79 aa5.37□□□□□ -1.55
CSNK1A1-209ENST00000606299 Q5W150 140 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms