RNA–Protein interactions for RNA: ENST00000604306.1

NEDD8-MDP1-203, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 681 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-203ENST00000604306 EPPK1P58107 5090 aaKnown RBP7.01□□□□□ -1.29
NEDD8-MDP1-203ENST00000604306 KIAA1109Q2LD37 5005 aa7□□□□□ -1.29
NEDD8-MDP1-203ENST00000604306 C8orf17Q9NRJ1 99 aa7□□□□□ -1.29
NEDD8-MDP1-203ENST00000604306 UQCRQO14949 82 aa6.99□□□□□ -1.29
NEDD8-MDP1-203ENST00000604306 OXTP01178 125 aa6.99□□□□□ -1.29
NEDD8-MDP1-203ENST00000604306 COX7CP15954 63 aa6.99□□□□□ -1.29
NEDD8-MDP1-203ENST00000604306 CASC2Q6XLA1 102 aa6.99□□□□□ -1.29
NEDD8-MDP1-203ENST00000604306 KRTAP17-1Q9BYP8 105 aa6.98□□□□□ -1.29
NEDD8-MDP1-203ENST00000604306 OCR1Q9BZK8 76 aa6.98□□□□□ -1.29
NEDD8-MDP1-203ENST00000604306 hDV103S1A0JD37 113 aa6.97□□□□□ -1.29
NEDD8-MDP1-203ENST00000604306 TMEM254Q8TBM7 123 aa6.97□□□□□ -1.29
NEDD8-MDP1-203ENST00000604306 IGHV6-1A0A0B4J1U7 121 aa6.96□□□□□ -1.3
NEDD8-MDP1-203ENST00000604306 FLG2Q5D862 2391 aaPredicted RBP6.95□□□□□ -1.3
NEDD8-MDP1-203ENST00000604306 WFDC13Q8IUB5 93 aa6.94□□□□□ -1.3
NEDD8-MDP1-203ENST00000604306 TP53AIP1Q9HCN2 124 aa6.94□□□□□ -1.3
NEDD8-MDP1-203ENST00000604306 LINC00313P59037 77 aa6.92□□□□□ -1.3
NEDD8-MDP1-203ENST00000604306 MRPL34Q9BQ48 92 aaKnown RBP6.92□□□□□ -1.3
NEDD8-MDP1-203ENST00000604306 MT1HL1P0DM35 61 aa6.91□□□□□ -1.3
NEDD8-MDP1-203ENST00000604306 FP248Q71RG6 208 aaPredicted RBP6.91□□□□□ -1.3
NEDD8-MDP1-203ENST00000604306 C5orf47Q569G3 176 aa6.9□□□□□ -1.3
NEDD8-MDP1-203ENST00000604306 H3BPC8 53 aa6.88□□□□□ -1.31
NEDD8-MDP1-203ENST00000604306 KLKP1Q107X0 134 aa6.87□□□□□ -1.31
NEDD8-MDP1-203ENST00000604306 NOTCH2NLQ7Z3S9 236 aa6.87□□□□□ -1.31
NEDD8-MDP1-203ENST00000604306 Q8N9P0 234 aaPredicted RBP6.87□□□□□ -1.31
NEDD8-MDP1-203ENST00000604306 TNXBP22105 4242 aa6.87□□□□□ -1.31
NEDD8-MDP1-203ENST00000604306 KRTAP16-1A8MUX0 517 aa6.86□□□□□ -1.31
NEDD8-MDP1-203ENST00000604306 CCDC179H3BU77 68 aa6.86□□□□□ -1.31
NEDD8-MDP1-203ENST00000604306 FAT3Q8TDW7 4589 aa6.86□□□□□ -1.31
NEDD8-MDP1-203ENST00000604306 BIRC6Q9NR09 4857 aa6.84□□□□□ -1.31
NEDD8-MDP1-203ENST00000604306 TRAV22A0A0B4J277 110 aa6.83□□□□□ -1.32
NEDD8-MDP1-203ENST00000604306 NDUFC1O43677 76 aa6.83□□□□□ -1.32
NEDD8-MDP1-203ENST00000604306 MP68P56378 58 aa6.83□□□□□ -1.32
NEDD8-MDP1-203ENST00000604306 LRP1Q07954 4544 aaKnown RBP6.83□□□□□ -1.32
NEDD8-MDP1-203ENST00000604306 A0A0U1RQV1 116 aa6.82□□□□□ -1.32
NEDD8-MDP1-203ENST00000604306 C20orf197Q8N268 126 aa6.82□□□□□ -1.32
NEDD8-MDP1-203ENST00000604306 KRTAP4-5Q9BYR2 181 aa6.81□□□□□ -1.32
NEDD8-MDP1-203ENST00000604306 NDUFS5O43920 106 aa6.79□□□□□ -1.32
NEDD8-MDP1-203ENST00000604306 DMBT1Q9UGM3 2413 aaPredicted RBP6.79□□□□□ -1.32
NEDD8-MDP1-203ENST00000604306 H0Y9P7 68 aa6.78□□□□□ -1.32
NEDD8-MDP1-203ENST00000604306 ZCCHC13Q8WW36 166 aaKnown RBP6.78□□□□□ -1.32
NEDD8-MDP1-203ENST00000604306 C20orf166-AS1Q96NR2 134 aa6.77□□□□□ -1.33
NEDD8-MDP1-203ENST00000604306 KRTAP13-3Q3SY46 172 aa6.76□□□□□ -1.33
NEDD8-MDP1-203ENST00000604306 RETNLBQ9BQ08 111 aa6.76□□□□□ -1.33
NEDD8-MDP1-203ENST00000604306 HERC2O95714 4834 aa6.75□□□□□ -1.33
NEDD8-MDP1-203ENST00000604306 A8MUU9 505 aa6.75□□□□□ -1.33
NEDD8-MDP1-203ENST00000604306 TMEM258P61165 79 aa6.74□□□□□ -1.33
NEDD8-MDP1-203ENST00000604306 MYCBP2O75592 4640 aa6.74□□□□□ -1.33
NEDD8-MDP1-203ENST00000604306 IGLV7-46A0A075B6I9 117 aa6.73□□□□□ -1.33
NEDD8-MDP1-203ENST00000604306 LOC101927531A0A1B0GV80 90 aa6.73□□□□□ -1.33
NEDD8-MDP1-203ENST00000604306 H7BZZ5 65 aa6.72□□□□□ -1.33
NEDD8-MDP1-203ENST00000604306 Q75L30 129 aa6.72□□□□□ -1.33
NEDD8-MDP1-203ENST00000604306 C1orf64Q8NEQ6 169 aa6.72□□□□□ -1.33
NEDD8-MDP1-203ENST00000604306 SNURFQ9Y675 71 aa6.72□□□□□ -1.33
NEDD8-MDP1-203ENST00000604306 LINC00208Q96KT6 92 aa6.71□□□□□ -1.34
NEDD8-MDP1-203ENST00000604306 ATP5EP56381 51 aaPredicted RBP6.7□□□□□ -1.34
NEDD8-MDP1-203ENST00000604306 CYSTM1Q9H1C7 97 aa6.7□□□□□ -1.34
NEDD8-MDP1-203ENST00000604306 J3QL48 77 aa6.69□□□□□ -1.34
NEDD8-MDP1-203ENST00000604306 TPRXLQ17RH7 258 aa6.69□□□□□ -1.34
NEDD8-MDP1-203ENST00000604306 Q5W150 140 aa6.69□□□□□ -1.34
NEDD8-MDP1-203ENST00000604306 C9orf92A6NGG3 77 aa6.68□□□□□ -1.34
NEDD8-MDP1-203ENST00000604306 SPANXA2-OT1Q8N9U9 137 aa6.66□□□□□ -1.34
NEDD8-MDP1-203ENST00000604306 ABCA13Q86UQ4 5058 aa6.64□□□□□ -1.35
NEDD8-MDP1-203ENST00000604306 IGKV2-30P06310 120 aa6.64□□□□□ -1.35
NEDD8-MDP1-203ENST00000604306 PRR4Q16378 134 aa6.64□□□□□ -1.35
NEDD8-MDP1-203ENST00000604306 RPL37P61927 97 aaKnown RBP6.63□□□□□ -1.35
NEDD8-MDP1-203ENST00000604306 CYP4F30PQ9H0H9 118 aa6.63□□□□□ -1.35
NEDD8-MDP1-203ENST00000604306 FAM236DA0A1B0GTK5 79 aa6.62□□□□□ -1.35
NEDD8-MDP1-203ENST00000604306 FAM236CP0DP71 79 aa6.62□□□□□ -1.35
NEDD8-MDP1-203ENST00000604306 XP32Q5T750 250 aa6.62□□□□□ -1.35
NEDD8-MDP1-203ENST00000604306 C7orf65Q6ZTY9 151 aa6.6□□□□□ -1.35
NEDD8-MDP1-203ENST00000604306 ATP11AUNQ6ZP68 121 aa6.58□□□□□ -1.36
NEDD8-MDP1-203ENST00000604306 RPS28P62857 69 aaKnown RBP6.54□□□□□ -1.36
NEDD8-MDP1-203ENST00000604306 PCOTHQ58A44 107 aa6.53□□□□□ -1.36
NEDD8-MDP1-203ENST00000604306 IGKV2D-30A0A075B6S6 120 aa6.52□□□□□ -1.37
NEDD8-MDP1-203ENST00000604306 SERP1Q9Y6X1 66 aa6.51□□□□□ -1.37
NEDD8-MDP1-203ENST00000604306 HRES1P13985 223 aa6.49□□□□□ -1.37
NEDD8-MDP1-203ENST00000604306 SPINK7P58062 85 aa6.48□□□□□ -1.37
NEDD8-MDP1-203ENST00000604306 DMAC1Q96GE9 116 aa6.47□□□□□ -1.37
NEDD8-MDP1-203ENST00000604306 A8MUN3 132 aa6.46□□□□□ -1.38
NEDD8-MDP1-203ENST00000604306 SEC61BP60468 96 aaKnown RBP6.45□□□□□ -1.38
NEDD8-MDP1-203ENST00000604306 PCLOQ9Y6V0 5065 aa6.43□□□□□ -1.38
NEDD8-MDP1-203ENST00000604306 ACYP2P14621 99 aa6.42□□□□□ -1.38
NEDD8-MDP1-203ENST00000604306 COX6B2Q6YFQ2 88 aa6.36□□□□□ -1.39
NEDD8-MDP1-203ENST00000604306 COA5Q86WW8 74 aa6.36□□□□□ -1.39
NEDD8-MDP1-203ENST00000604306 SMIM26A0A096LP01 95 aa6.34□□□□□ -1.39
NEDD8-MDP1-203ENST00000604306 C4orf26Q17RF5 130 aa6.34□□□□□ -1.39
NEDD8-MDP1-203ENST00000604306 LRP2P98164 4655 aa6.34□□□□□ -1.39
NEDD8-MDP1-203ENST00000604306 MPLKIPQ8TAP9 179 aa6.32□□□□□ -1.4
NEDD8-MDP1-203ENST00000604306 LPAP08519 4548 aa6.31□□□□□ -1.4
NEDD8-MDP1-203ENST00000604306 KRTAP3-1Q9BYR8 98 aa6.28□□□□□ -1.4
NEDD8-MDP1-203ENST00000604306 RBM12B-AS1Q9P1G2 102 aa6.28□□□□□ -1.4
NEDD8-MDP1-203ENST00000604306 CHKB-CPT1BH3BT56 60 aa6.27□□□□□ -1.41
NEDD8-MDP1-203ENST00000604306 V9GYY9 64 aa6.27□□□□□ -1.41
NEDD8-MDP1-203ENST00000604306 SPTSSBQ8NFR3 76 aa6.25□□□□□ -1.41
NEDD8-MDP1-203ENST00000604306 MUC17Q685J3 4493 aa6.24□□□□□ -1.41
NEDD8-MDP1-203ENST00000604306 HMCN2Q8NDA2 5059 aa6.23□□□□□ -1.41
NEDD8-MDP1-203ENST00000604306 Q1T7F1 81 aa6.23□□□□□ -1.41
NEDD8-MDP1-203ENST00000604306 HERC1Q15751 4861 aa6.21□□□□□ -1.42
NEDD8-MDP1-203ENST00000604306 H1FX-AS1Q4G0G2 97 aa6.2□□□□□ -1.42
NEDD8-MDP1-203ENST00000604306 LINC01558Q9Y6Z2 57 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms