RNA–Protein interactions for RNA: ENST00000599223.5

IRF3-223, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-223ENST00000599223 SIGMAR1Q99720 223 aa7.93□□□□□ -1.14
IRF3-223ENST00000599223 FLGP20930 4061 aaPredicted RBP7.91□□□□□ -1.14
IRF3-223ENST00000599223 IGFL1Q6UW32 110 aa7.91□□□□□ -1.14
IRF3-223ENST00000599223 LINC00846Q9NV44 126 aa7.91□□□□□ -1.14
IRF3-223ENST00000599223 LORP23490 312 aaPredicted RBP7.89□□□□□ -1.15
IRF3-223ENST00000599223 A0A0G2JQZ4 141 aa7.88□□□□□ -1.15
IRF3-223ENST00000599223 ATP5EP2Q5VTU8 51 aa7.88□□□□□ -1.15
IRF3-223ENST00000599223 A0A1W2PNM2 257 aa7.87□□□□□ -1.15
IRF3-223ENST00000599223 KRTAP10-6P60371 365 aaPredicted RBP7.87□□□□□ -1.15
IRF3-223ENST00000599223 NREPQ16612 68 aa7.87□□□□□ -1.15
IRF3-223ENST00000599223 CD164Q04900 197 aa7.86□□□□□ -1.15
IRF3-223ENST00000599223 Q6Q795 121 aa7.85□□□□□ -1.15
IRF3-223ENST00000599223 C1orf195Q5TG92 126 aa7.84□□□□□ -1.15
IRF3-223ENST00000599223 Q6ZVQ6 151 aa7.84□□□□□ -1.15
IRF3-223ENST00000599223 MT-ATP8P03928 68 aa7.83□□□□□ -1.16
IRF3-223ENST00000599223 TRBV7-7A0A0K0K1E9 115 aa7.82□□□□□ -1.16
IRF3-223ENST00000599223 Q5XG85 94 aa7.82□□□□□ -1.16
IRF3-223ENST00000599223 IMUPQ9GZP8 106 aa7.82□□□□□ -1.16
IRF3-223ENST00000599223 RPL37P61927 97 aaKnown RBP7.81□□□□□ -1.16
IRF3-223ENST00000599223 SS18L2Q9UHA2 77 aa7.81□□□□□ -1.16
IRF3-223ENST00000599223 A0A087WSZ3 146 aa7.8□□□□□ -1.16
IRF3-223ENST00000599223 IGKV3D-7A0A0C4DH55 119 aa7.8□□□□□ -1.16
IRF3-223ENST00000599223 CXCL6P80162 114 aa7.8□□□□□ -1.16
IRF3-223ENST00000599223 BPY2O14599 106 aa7.79□□□□□ -1.16
IRF3-223ENST00000599223 SCGB1A1P11684 91 aa7.76□□□□□ -1.17
IRF3-223ENST00000599223 HIST1H4AP62805 103 aaKnown RBP7.76□□□□□ -1.17
IRF3-223ENST00000599223 M0R2T5 61 aa7.74□□□□□ -1.17
IRF3-223ENST00000599223 COX6B2Q6YFQ2 88 aa7.73□□□□□ -1.17
IRF3-223ENST00000599223 J3KT08 172 aa7.72□□□□□ -1.17
IRF3-223ENST00000599223 NDUFB1O75438 58 aa7.67□□□□□ -1.18
IRF3-223ENST00000599223 LINC00472Q9H8W2 130 aa7.66□□□□□ -1.18
IRF3-223ENST00000599223 FAM236AA0A1B0GUQ0 79 aa7.65□□□□□ -1.18
IRF3-223ENST00000599223 FAM236BA0A1B0GV22 79 aa7.65□□□□□ -1.18
IRF3-223ENST00000599223 IGKV4-1P06312 121 aa7.64□□□□□ -1.19
IRF3-223ENST00000599223 DEFB116Q30KQ4 102 aa7.64□□□□□ -1.19
IRF3-223ENST00000599223 A0A087WVE0 104 aa7.62□□□□□ -1.19
IRF3-223ENST00000599223 A8MWP4 228 aa7.62□□□□□ -1.19
IRF3-223ENST00000599223 DSCR10P59022 87 aa7.62□□□□□ -1.19
IRF3-223ENST00000599223 Q8N9L7 120 aa7.61□□□□□ -1.19
IRF3-223ENST00000599223 K7EQZ3 153 aa7.6□□□□□ -1.19
IRF3-223ENST00000599223 ATOX1O00244 68 aa7.6□□□□□ -1.19
IRF3-223ENST00000599223 Q75L30 129 aa7.6□□□□□ -1.19
IRF3-223ENST00000599223 ANAPC13Q9BS18 74 aa7.59□□□□□ -1.19
IRF3-223ENST00000599223 PRR15Q8IV56 129 aa7.58□□□□□ -1.2
IRF3-223ENST00000599223 Q96NJ1 140 aa7.58□□□□□ -1.2
IRF3-223ENST00000599223 SMIM20Q8N5G0 67 aa7.57□□□□□ -1.2
IRF3-223ENST00000599223 HCG22E2RYF7 251 aa7.56□□□□□ -1.2
IRF3-223ENST00000599223 USH2AO75445 5202 aa7.55□□□□□ -1.2
IRF3-223ENST00000599223 PCP4P48539 62 aa7.55□□□□□ -1.2
IRF3-223ENST00000599223 ATP11AUNQ6ZP68 121 aa7.55□□□□□ -1.2
IRF3-223ENST00000599223 SSPOA2VEC9 5147 aa7.55□□□□□ -1.2
IRF3-223ENST00000599223 A0A1B0GVX0 72 aa7.54□□□□□ -1.2
IRF3-223ENST00000599223 IGHV6-1A0A0B4J1U7 121 aa7.53□□□□□ -1.2
IRF3-223ENST00000599223 KRTAP9-8Q9BYQ0 159 aa7.53□□□□□ -1.2
IRF3-223ENST00000599223 CASC2Q6XLA1 102 aa7.51□□□□□ -1.21
IRF3-223ENST00000599223 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.5□□□□□ -1.21
IRF3-223ENST00000599223 C8orf87E5RJ46 101 aa7.5□□□□□ -1.21
IRF3-223ENST00000599223 WFDC13Q8IUB5 93 aa7.5□□□□□ -1.21
IRF3-223ENST00000599223 C20orf166-AS1Q96NR2 134 aa7.49□□□□□ -1.21
IRF3-223ENST00000599223 C8orf17Q9NRJ1 99 aa7.49□□□□□ -1.21
IRF3-223ENST00000599223 hDV103S1A0JD37 113 aa7.48□□□□□ -1.21
IRF3-223ENST00000599223 TRAV7A0A075B6U4 112 aa7.47□□□□□ -1.21
IRF3-223ENST00000599223 A8MUU9 505 aa7.47□□□□□ -1.21
IRF3-223ENST00000599223 SERP2Q8N6R1 65 aa7.47□□□□□ -1.21
IRF3-223ENST00000599223 MMP24-AS1A0A0U1RRL7 71 aa7.46□□□□□ -1.22
IRF3-223ENST00000599223 KRTAP9-7A8MTY7 169 aa7.45□□□□□ -1.22
IRF3-223ENST00000599223 LINC00313P59037 77 aa7.44□□□□□ -1.22
IRF3-223ENST00000599223 COX7CP15954 63 aa7.43□□□□□ -1.22
IRF3-223ENST00000599223 TMEM254Q8TBM7 123 aa7.43□□□□□ -1.22
IRF3-223ENST00000599223 UQCRQO14949 82 aa7.42□□□□□ -1.22
IRF3-223ENST00000599223 MT2AP02795 61 aa7.41□□□□□ -1.22
IRF3-223ENST00000599223 MRPL34Q9BQ48 92 aaKnown RBP7.41□□□□□ -1.22
IRF3-223ENST00000599223 KRTAP16-1A8MUX0 517 aa7.4□□□□□ -1.22
IRF3-223ENST00000599223 NDUFS5O43920 106 aa7.4□□□□□ -1.22
IRF3-223ENST00000599223 TP53AIP1Q9HCN2 124 aa7.4□□□□□ -1.22
IRF3-223ENST00000599223 FCGBPQ9Y6R7 5405 aaPredicted RBP7.4□□□□□ -1.23
IRF3-223ENST00000599223 OCR1Q9BZK8 76 aa7.39□□□□□ -1.23
IRF3-223ENST00000599223 MT1FP04733 61 aa7.37□□□□□ -1.23
IRF3-223ENST00000599223 LCE2BO14633 110 aa7.35□□□□□ -1.23
IRF3-223ENST00000599223 MP68P56378 58 aa7.35□□□□□ -1.23
IRF3-223ENST00000599223 C5orf47Q569G3 176 aa7.35□□□□□ -1.23
IRF3-223ENST00000599223 NOTCH2NLQ7Z3S9 236 aa7.34□□□□□ -1.23
IRF3-223ENST00000599223 CCDC179H3BU77 68 aa7.33□□□□□ -1.24
IRF3-223ENST00000599223 MPLKIPQ8TAP9 179 aa7.32□□□□□ -1.24
IRF3-223ENST00000599223 HRES1P13985 223 aa7.31□□□□□ -1.24
IRF3-223ENST00000599223 C20orf197Q8N268 126 aa7.31□□□□□ -1.24
IRF3-223ENST00000599223 FAM236DA0A1B0GTK5 79 aa7.3□□□□□ -1.24
IRF3-223ENST00000599223 FAM236CP0DP71 79 aa7.3□□□□□ -1.24
IRF3-223ENST00000599223 KRTAP19-1Q8IUB9 90 aa7.3□□□□□ -1.24
IRF3-223ENST00000599223 TRAV22A0A0B4J277 110 aa7.29□□□□□ -1.24
IRF3-223ENST00000599223 H0Y9P7 68 aa7.29□□□□□ -1.24
IRF3-223ENST00000599223 H3BPC8 53 aa7.29□□□□□ -1.24
IRF3-223ENST00000599223 KRTAP9-3Q9BYQ3 159 aa7.29□□□□□ -1.24
IRF3-223ENST00000599223 Q8N9P0 234 aaPredicted RBP7.28□□□□□ -1.24
IRF3-223ENST00000599223 NDUFC1O43677 76 aa7.26□□□□□ -1.25
IRF3-223ENST00000599223 KLKP1Q107X0 134 aa7.25□□□□□ -1.25
IRF3-223ENST00000599223 KRTAP10-10P60014 251 aa7.24□□□□□ -1.25
IRF3-223ENST00000599223 SNURFQ9Y675 71 aa7.24□□□□□ -1.25
IRF3-223ENST00000599223 MACF1Q9UPN3 7388 aaKnown RBP7.23□□□□□ -1.25
IRF3-223ENST00000599223 LINC00208Q96KT6 92 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms