RNA–Protein interactions for RNA: ENST00000598969.5

COPE-208, Transcript of coatomer protein complex subunit epsilon, humanhuman

TSL 5

Gene COPE, Length 1,770 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-208ENST00000598969 Q5XG85 94 aa11.97□□□□□ -0.49
COPE-208ENST00000598969 RPS29P62273 56 aaKnown RBP11.96□□□□□ -0.49
COPE-208ENST00000598969 A8MWP4 228 aa11.95□□□□□ -0.5
COPE-208ENST00000598969 NDUFB1O75438 58 aa11.94□□□□□ -0.5
COPE-208ENST00000598969 ANAPC13Q9BS18 74 aa11.93□□□□□ -0.5
COPE-208ENST00000598969 DMBT1Q9UGM3 2413 aaPredicted RBP11.93□□□□□ -0.5
COPE-208ENST00000598969 ATOX1O00244 68 aa11.92□□□□□ -0.5
COPE-208ENST00000598969 J3QL48 77 aa11.92□□□□□ -0.5
COPE-208ENST00000598969 PRR15Q8IV56 129 aa11.9□□□□□ -0.5
COPE-208ENST00000598969 HCG22E2RYF7 251 aa11.85□□□□□ -0.51
COPE-208ENST00000598969 C1orf195Q5TG92 126 aa11.84□□□□□ -0.51
COPE-208ENST00000598969 A0A1B0GVX0 72 aa11.82□□□□□ -0.52
COPE-208ENST00000598969 SMIM20Q8N5G0 67 aa11.82□□□□□ -0.52
COPE-208ENST00000598969 RETNLBQ9BQ08 111 aa11.79□□□□□ -0.52
COPE-208ENST00000598969 IGHV6-1A0A0B4J1U7 121 aa11.79□□□□□ -0.52
COPE-208ENST00000598969 CASC2Q6XLA1 102 aa11.77□□□□□ -0.53
COPE-208ENST00000598969 WFDC13Q8IUB5 93 aa11.77□□□□□ -0.53
COPE-208ENST00000598969 SERP2Q8N6R1 65 aa11.76□□□□□ -0.53
COPE-208ENST00000598969 MMP24-AS1A0A0U1RRL7 71 aa11.74□□□□□ -0.53
COPE-208ENST00000598969 C8orf17Q9NRJ1 99 aa11.74□□□□□ -0.53
COPE-208ENST00000598969 TRAV7A0A075B6U4 112 aa11.72□□□□□ -0.53
COPE-208ENST00000598969 hDV103S1A0JD37 113 aa11.72□□□□□ -0.53
COPE-208ENST00000598969 COX7CP15954 63 aa11.71□□□□□ -0.54
COPE-208ENST00000598969 C8orf87E5RJ46 101 aa11.69□□□□□ -0.54
COPE-208ENST00000598969 UQCRQO14949 82 aa11.69□□□□□ -0.54
COPE-208ENST00000598969 OCR1Q9BZK8 76 aa11.67□□□□□ -0.54
COPE-208ENST00000598969 FP248Q71RG6 208 aaPredicted RBP11.65□□□□□ -0.54
COPE-208ENST00000598969 LINC00313P59037 77 aa11.64□□□□□ -0.55
COPE-208ENST00000598969 NOTCH2NLQ7Z3S9 236 aa11.63□□□□□ -0.55
COPE-208ENST00000598969 TMEM254Q8TBM7 123 aa11.63□□□□□ -0.55
COPE-208ENST00000598969 HERC1Q15751 4861 aa11.62□□□□□ -0.55
COPE-208ENST00000598969 CCDC179H3BU77 68 aa11.62□□□□□ -0.55
COPE-208ENST00000598969 MRPL34Q9BQ48 92 aaKnown RBP11.62□□□□□ -0.55
COPE-208ENST00000598969 PRR4Q16378 134 aa11.61□□□□□ -0.55
COPE-208ENST00000598969 IGLV7-46A0A075B6I9 117 aa11.59□□□□□ -0.55
COPE-208ENST00000598969 TP53AIP1Q9HCN2 124 aa11.56□□□□□ -0.56
COPE-208ENST00000598969 NDUFS5O43920 106 aa11.55□□□□□ -0.56
COPE-208ENST00000598969 C5orf47Q569G3 176 aa11.53□□□□□ -0.56
COPE-208ENST00000598969 C20orf197Q8N268 126 aa11.51□□□□□ -0.57
COPE-208ENST00000598969 C9orf92A6NGG3 77 aa11.49□□□□□ -0.57
COPE-208ENST00000598969 KRTAP13-3Q3SY46 172 aa11.49□□□□□ -0.57
COPE-208ENST00000598969 KRTAP16-1A8MUX0 517 aa11.46□□□□□ -0.58
COPE-208ENST00000598969 MP68P56378 58 aa11.46□□□□□ -0.58
COPE-208ENST00000598969 Q8N9P0 234 aaPredicted RBP11.46□□□□□ -0.58
COPE-208ENST00000598969 HMCN2Q8NDA2 5059 aa11.45□□□□□ -0.58
COPE-208ENST00000598969 TPRXLQ17RH7 258 aa11.45□□□□□ -0.58
COPE-208ENST00000598969 KLKP1Q107X0 134 aa11.44□□□□□ -0.58
COPE-208ENST00000598969 TRAV22A0A0B4J277 110 aa11.43□□□□□ -0.58
COPE-208ENST00000598969 H0Y9P7 68 aa11.41□□□□□ -0.58
COPE-208ENST00000598969 SNURFQ9Y675 71 aa11.41□□□□□ -0.58
COPE-208ENST00000598969 LPAP08519 4548 aa11.41□□□□□ -0.58
COPE-208ENST00000598969 A0A0U1RQV1 116 aa11.4□□□□□ -0.58
COPE-208ENST00000598969 H3BPC8 53 aa11.39□□□□□ -0.59
COPE-208ENST00000598969 NDUFC1O43677 76 aa11.36□□□□□ -0.59
COPE-208ENST00000598969 XP32Q5T750 250 aa11.35□□□□□ -0.59
COPE-208ENST00000598969 LINC00208Q96KT6 92 aa11.35□□□□□ -0.59
COPE-208ENST00000598969 CYSTM1Q9H1C7 97 aa11.34□□□□□ -0.59
COPE-208ENST00000598969 C1orf64Q8NEQ6 169 aa11.31□□□□□ -0.6
COPE-208ENST00000598969 ZCCHC13Q8WW36 166 aaKnown RBP11.3□□□□□ -0.6
COPE-208ENST00000598969 C20orf166-AS1Q96NR2 134 aa11.3□□□□□ -0.6
COPE-208ENST00000598969 Q5W150 140 aa11.29□□□□□ -0.6
COPE-208ENST00000598969 LRP2P98164 4655 aa11.29□□□□□ -0.6
COPE-208ENST00000598969 A8MUU9 505 aa11.28□□□□□ -0.6
COPE-208ENST00000598969 H7BZZ5 65 aa11.27□□□□□ -0.61
COPE-208ENST00000598969 Q75L30 129 aa11.25□□□□□ -0.61
COPE-208ENST00000598969 TMEM258P61165 79 aa11.24□□□□□ -0.61
COPE-208ENST00000598969 LOC101927531A0A1B0GV80 90 aa11.23□□□□□ -0.61
COPE-208ENST00000598969 RPL37P61927 97 aaKnown RBP11.22□□□□□ -0.61
COPE-208ENST00000598969 CYP4F30PQ9H0H9 118 aa11.12□□□□□ -0.63
COPE-208ENST00000598969 FAM236DA0A1B0GTK5 79 aa11.11□□□□□ -0.63
COPE-208ENST00000598969 IGKV2-30P06310 120 aa11.11□□□□□ -0.63
COPE-208ENST00000598969 FAM236CP0DP71 79 aa11.11□□□□□ -0.63
COPE-208ENST00000598969 ATP5EP56381 51 aaPredicted RBP11.1□□□□□ -0.63
COPE-208ENST00000598969 PCOTHQ58A44 107 aa11.09□□□□□ -0.63
COPE-208ENST00000598969 MUC17Q685J3 4493 aa11.08□□□□□ -0.64
COPE-208ENST00000598969 ATP11AUNQ6ZP68 121 aa11.08□□□□□ -0.64
COPE-208ENST00000598969 IGKV2D-30A0A075B6S6 120 aa11.06□□□□□ -0.64
COPE-208ENST00000598969 SPANXA2-OT1Q8N9U9 137 aa11.05□□□□□ -0.64
COPE-208ENST00000598969 SEC61BP60468 96 aaKnown RBP11.04□□□□□ -0.64
COPE-208ENST00000598969 C7orf65Q6ZTY9 151 aa11.03□□□□□ -0.64
COPE-208ENST00000598969 UBR4Q5T4S7 5183 aa10.95□□□□□ -0.66
COPE-208ENST00000598969 HRES1P13985 223 aa10.93□□□□□ -0.66
COPE-208ENST00000598969 SPINK7P58062 85 aa10.92□□□□□ -0.66
COPE-208ENST00000598969 KRTAP4-1Q9BYQ7 146 aa10.91□□□□□ -0.66
COPE-208ENST00000598969 SERP1Q9Y6X1 66 aa10.89□□□□□ -0.67
COPE-208ENST00000598969 RPS28P62857 69 aaKnown RBP10.87□□□□□ -0.67
COPE-208ENST00000598969 RNF213Q63HN8 5207 aa10.85□□□□□ -0.67
COPE-208ENST00000598969 DMAC1Q96GE9 116 aa10.78□□□□□ -0.68
COPE-208ENST00000598969 ACYP2P14621 99 aa10.77□□□□□ -0.69
COPE-208ENST00000598969 C4orf26Q17RF5 130 aa10.77□□□□□ -0.69
COPE-208ENST00000598969 MUC2Q02817 5179 aa10.76□□□□□ -0.69
COPE-208ENST00000598969 A8MUN3 132 aa10.71□□□□□ -0.69
COPE-208ENST00000598969 COA5Q86WW8 74 aa10.7□□□□□ -0.7
COPE-208ENST00000598969 MPLKIPQ8TAP9 179 aa10.66□□□□□ -0.7
COPE-208ENST00000598969 COX6B2Q6YFQ2 88 aa10.64□□□□□ -0.71
COPE-208ENST00000598969 SVIPQ8NHG7 77 aa10.64□□□□□ -0.71
COPE-208ENST00000598969 SMIM26A0A096LP01 95 aa10.6□□□□□ -0.71
COPE-208ENST00000598969 CHKB-CPT1BH3BT56 60 aa10.6□□□□□ -0.71
COPE-208ENST00000598969 KRTAP3-1Q9BYR8 98 aa10.57□□□□□ -0.72
COPE-208ENST00000598969 KRTAP19-2Q3LHN2 52 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 99.9 ms