RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 KRTAP4-1Q9BYQ7 146 aa7.63□□□□□ -1.19
SCAF1-203ENST00000598359 ASB16-AS1Q495Z4 193 aa7.62□□□□□ -1.19
SCAF1-203ENST00000598359 HIST1H4AP62805 103 aaKnown RBP7.61□□□□□ -1.19
SCAF1-203ENST00000598359 IGKV3D-7A0A0C4DH55 119 aa7.6□□□□□ -1.19
SCAF1-203ENST00000598359 A0A0G2JQZ4 141 aa7.6□□□□□ -1.19
SCAF1-203ENST00000598359 F8WEM9 126 aa7.6□□□□□ -1.19
SCAF1-203ENST00000598359 A0A1W2PNM2 257 aa7.59□□□□□ -1.19
SCAF1-203ENST00000598359 CXCL6P80162 114 aa7.59□□□□□ -1.19
SCAF1-203ENST00000598359 XP32Q5T750 250 aa7.59□□□□□ -1.19
SCAF1-203ENST00000598359 FAM236AA0A1B0GUQ0 79 aa7.57□□□□□ -1.2
SCAF1-203ENST00000598359 FAM236BA0A1B0GV22 79 aa7.57□□□□□ -1.2
SCAF1-203ENST00000598359 SEC61BP60468 96 aaKnown RBP7.57□□□□□ -1.2
SCAF1-203ENST00000598359 LIMD2Q9BT23 127 aa7.57□□□□□ -1.2
SCAF1-203ENST00000598359 ANAPC13Q9BS18 74 aa7.56□□□□□ -1.2
SCAF1-203ENST00000598359 C9orf92A6NGG3 77 aa7.55□□□□□ -1.2
SCAF1-203ENST00000598359 IGFL1Q6UW32 110 aa7.55□□□□□ -1.2
SCAF1-203ENST00000598359 CD164Q04900 197 aa7.52□□□□□ -1.21
SCAF1-203ENST00000598359 NREPQ16612 68 aa7.52□□□□□ -1.21
SCAF1-203ENST00000598359 A0A087WVE0 104 aa7.51□□□□□ -1.21
SCAF1-203ENST00000598359 ATOX1O00244 68 aa7.51□□□□□ -1.21
SCAF1-203ENST00000598359 C1orf195Q5TG92 126 aa7.49□□□□□ -1.21
SCAF1-203ENST00000598359 PCOTHQ58A44 107 aa7.47□□□□□ -1.21
SCAF1-203ENST00000598359 BPY2O14599 106 aa7.46□□□□□ -1.22
SCAF1-203ENST00000598359 Q5XG85 94 aa7.46□□□□□ -1.22
SCAF1-203ENST00000598359 IGKV4-1P06312 121 aa7.45□□□□□ -1.22
SCAF1-203ENST00000598359 A0A087WSZ3 146 aa7.42□□□□□ -1.22
SCAF1-203ENST00000598359 COX7CP15954 63 aa7.42□□□□□ -1.22
SCAF1-203ENST00000598359 UQCRQO14949 82 aa7.41□□□□□ -1.22
SCAF1-203ENST00000598359 DSCR10P59022 87 aa7.41□□□□□ -1.22
SCAF1-203ENST00000598359 LCE2CQ5TA81 110 aa7.41□□□□□ -1.22
SCAF1-203ENST00000598359 SERP2Q8N6R1 65 aa7.41□□□□□ -1.22
SCAF1-203ENST00000598359 CCDC179H3BU77 68 aa7.4□□□□□ -1.22
SCAF1-203ENST00000598359 KRTAP19-2Q3LHN2 52 aa7.39□□□□□ -1.23
SCAF1-203ENST00000598359 SMIM20Q8N5G0 67 aa7.39□□□□□ -1.23
SCAF1-203ENST00000598359 Q8N9L7 120 aa7.37□□□□□ -1.23
SCAF1-203ENST00000598359 LINC00472Q9H8W2 130 aa7.37□□□□□ -1.23
SCAF1-203ENST00000598359 TRAV7A0A075B6U4 112 aa7.35□□□□□ -1.23
SCAF1-203ENST00000598359 RPL37P61927 97 aaKnown RBP7.35□□□□□ -1.23
SCAF1-203ENST00000598359 K7EQZ3 153 aa7.34□□□□□ -1.23
SCAF1-203ENST00000598359 SS18L2Q9UHA2 77 aa7.34□□□□□ -1.23
SCAF1-203ENST00000598359 J3KT08 172 aa7.33□□□□□ -1.24
SCAF1-203ENST00000598359 KRTAP9-7A8MTY7 169 aa7.31□□□□□ -1.24
SCAF1-203ENST00000598359 MT1HP80294 61 aa7.31□□□□□ -1.24
SCAF1-203ENST00000598359 Q96NJ1 140 aa7.31□□□□□ -1.24
SCAF1-203ENST00000598359 A8MWP4 228 aa7.29□□□□□ -1.24
SCAF1-203ENST00000598359 OCR1Q9BZK8 76 aa7.29□□□□□ -1.24
SCAF1-203ENST00000598359 HCG22E2RYF7 251 aa7.28□□□□□ -1.24
SCAF1-203ENST00000598359 PRR15Q8IV56 129 aa7.28□□□□□ -1.24
SCAF1-203ENST00000598359 DEFB116Q30KQ4 102 aa7.27□□□□□ -1.25
SCAF1-203ENST00000598359 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.23□□□□□ -1.25
SCAF1-203ENST00000598359 KLKP1Q107X0 134 aa7.23□□□□□ -1.25
SCAF1-203ENST00000598359 MMP24-AS1A0A0U1RRL7 71 aa7.21□□□□□ -1.26
SCAF1-203ENST00000598359 NDUFB1O75438 58 aa7.21□□□□□ -1.26
SCAF1-203ENST00000598359 COX6B2Q6YFQ2 88 aa7.21□□□□□ -1.26
SCAF1-203ENST00000598359 Q75L30 129 aa7.2□□□□□ -1.26
SCAF1-203ENST00000598359 C20orf197Q8N268 126 aa7.2□□□□□ -1.26
SCAF1-203ENST00000598359 CYSTM1Q9H1C7 97 aa7.2□□□□□ -1.26
SCAF1-203ENST00000598359 A0A1B0GVX0 72 aa7.18□□□□□ -1.26
SCAF1-203ENST00000598359 CASC2Q6XLA1 102 aa7.18□□□□□ -1.26
SCAF1-203ENST00000598359 ATP11AUNQ6ZP68 121 aa7.18□□□□□ -1.26
SCAF1-203ENST00000598359 FLGP20930 4061 aaPredicted RBP7.18□□□□□ -1.26
SCAF1-203ENST00000598359 M0R2T5 61 aa7.17□□□□□ -1.26
SCAF1-203ENST00000598359 KRTAP10-6P60371 365 aaPredicted RBP7.17□□□□□ -1.26
SCAF1-203ENST00000598359 TMEM258P61165 79 aa7.17□□□□□ -1.26
SCAF1-203ENST00000598359 WFDC13Q8IUB5 93 aa7.17□□□□□ -1.26
SCAF1-203ENST00000598359 LORP23490 312 aaPredicted RBP7.16□□□□□ -1.26
SCAF1-203ENST00000598359 TMEM254Q8TBM7 123 aa7.16□□□□□ -1.26
SCAF1-203ENST00000598359 C8orf17Q9NRJ1 99 aa7.16□□□□□ -1.26
SCAF1-203ENST00000598359 NDUFC1O43677 76 aa7.15□□□□□ -1.26
SCAF1-203ENST00000598359 hDV103S1A0JD37 113 aa7.13□□□□□ -1.27
SCAF1-203ENST00000598359 H7BZZ5 65 aa7.13□□□□□ -1.27
SCAF1-203ENST00000598359 C5orf47Q569G3 176 aa7.13□□□□□ -1.27
SCAF1-203ENST00000598359 C20orf166-AS1Q96NR2 134 aa7.13□□□□□ -1.27
SCAF1-203ENST00000598359 A8MUU9 505 aa7.12□□□□□ -1.27
SCAF1-203ENST00000598359 ZCCHC13Q8WW36 166 aaKnown RBP7.11□□□□□ -1.27
SCAF1-203ENST00000598359 SNURFQ9Y675 71 aa7.11□□□□□ -1.27
SCAF1-203ENST00000598359 C8orf87E5RJ46 101 aa7.1□□□□□ -1.27
SCAF1-203ENST00000598359 IGHV6-1A0A0B4J1U7 121 aa7.09□□□□□ -1.27
SCAF1-203ENST00000598359 H3BPC8 53 aa7.08□□□□□ -1.28
SCAF1-203ENST00000598359 MRPL34Q9BQ48 92 aaKnown RBP7.08□□□□□ -1.28
SCAF1-203ENST00000598359 TP53AIP1Q9HCN2 124 aa7.08□□□□□ -1.28
SCAF1-203ENST00000598359 NOTCH2NLQ7Z3S9 236 aa7.07□□□□□ -1.28
SCAF1-203ENST00000598359 LINC00313P59037 77 aa7.05□□□□□ -1.28
SCAF1-203ENST00000598359 FAM236DA0A1B0GTK5 79 aa7.04□□□□□ -1.28
SCAF1-203ENST00000598359 KRTAP16-1A8MUX0 517 aa7.04□□□□□ -1.28
SCAF1-203ENST00000598359 FAM236CP0DP71 79 aa7.04□□□□□ -1.28
SCAF1-203ENST00000598359 MP68P56378 58 aa7.04□□□□□ -1.28
SCAF1-203ENST00000598359 ATP5EP56381 51 aaPredicted RBP7.04□□□□□ -1.28
SCAF1-203ENST00000598359 TRAV22A0A0B4J277 110 aa7.02□□□□□ -1.29
SCAF1-203ENST00000598359 H0Y9P7 68 aa7.02□□□□□ -1.29
SCAF1-203ENST00000598359 RPS28P62857 69 aaKnown RBP7.02□□□□□ -1.29
SCAF1-203ENST00000598359 SSPOA2VEC9 5147 aa7.01□□□□□ -1.29
SCAF1-203ENST00000598359 USH2AO75445 5202 aa6.98□□□□□ -1.29
SCAF1-203ENST00000598359 LINC00208Q96KT6 92 aa6.98□□□□□ -1.29
SCAF1-203ENST00000598359 Q8N9P0 234 aaPredicted RBP6.97□□□□□ -1.29
SCAF1-203ENST00000598359 NDUFS5O43920 106 aa6.94□□□□□ -1.3
SCAF1-203ENST00000598359 C1orf64Q8NEQ6 169 aa6.94□□□□□ -1.3
SCAF1-203ENST00000598359 SERP1Q9Y6X1 66 aa6.94□□□□□ -1.3
SCAF1-203ENST00000598359 SPANXA2-OT1Q8N9U9 137 aa6.92□□□□□ -1.3
SCAF1-203ENST00000598359 SYNE2Q8WXH0 6885 aaKnown RBP6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 96.9 ms