RNA–Protein interactions for RNA: ENST00000597453.1

TGFB1-202, Transcript of transforming growth factor beta 1, humanhuman

TSL 1 (best)

Gene TGFB1, Length 392 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-202ENST00000597453 CCKP06307 115 aa8.22□□□□□ -1.09
TGFB1-202ENST00000597453 C14orf132Q9NPU4 83 aa8.22□□□□□ -1.09
TGFB1-202ENST00000597453 C1orf195Q5TG92 126 aa8.21□□□□□ -1.1
TGFB1-202ENST00000597453 LCE2DQ5TA82 110 aaPredicted RBP8.2□□□□□ -1.1
TGFB1-202ENST00000597453 PDE6GP18545 87 aa8.19□□□□□ -1.1
TGFB1-202ENST00000597453 ATP5EP2Q5VTU8 51 aa8.19□□□□□ -1.1
TGFB1-202ENST00000597453 LOC110117498A0A087WWA1 95 aa8.18□□□□□ -1.1
TGFB1-202ENST00000597453 MT1HP80294 61 aa8.16□□□□□ -1.1
TGFB1-202ENST00000597453 LINC00846Q9NV44 126 aa8.16□□□□□ -1.1
TGFB1-202ENST00000597453 HIST1H4AP62805 103 aaKnown RBP8.15□□□□□ -1.1
TGFB1-202ENST00000597453 RBM3P98179 157 aaKnown RBP8.14□□□□□ -1.11
TGFB1-202ENST00000597453 FAM236AA0A1B0GUQ0 79 aa8.13□□□□□ -1.11
TGFB1-202ENST00000597453 FAM236BA0A1B0GV22 79 aa8.13□□□□□ -1.11
TGFB1-202ENST00000597453 SS18L2Q9UHA2 77 aa8.13□□□□□ -1.11
TGFB1-202ENST00000597453 Q6ZQT0 140 aa8.12□□□□□ -1.11
TGFB1-202ENST00000597453 ATOX1O00244 68 aa8.11□□□□□ -1.11
TGFB1-202ENST00000597453 A0A087WSZ3 146 aa8.09□□□□□ -1.11
TGFB1-202ENST00000597453 A0A1W2PNM2 257 aa8.09□□□□□ -1.11
TGFB1-202ENST00000597453 RPL37P61927 97 aaKnown RBP8.09□□□□□ -1.11
TGFB1-202ENST00000597453 UBL5Q9BZL1 73 aa8.09□□□□□ -1.11
TGFB1-202ENST00000597453 FLGP20930 4061 aaPredicted RBP8.09□□□□□ -1.11
TGFB1-202ENST00000597453 CCDC179H3BU77 68 aa8.08□□□□□ -1.12
TGFB1-202ENST00000597453 DSCR8Q96T75 97 aa8.08□□□□□ -1.12
TGFB1-202ENST00000597453 TRBV7-4A0A0J9YYF1 115 aa8.07□□□□□ -1.12
TGFB1-202ENST00000597453 UQCRQO14949 82 aa8.07□□□□□ -1.12
TGFB1-202ENST00000597453 CRCT1Q9UGL9 99 aa8.07□□□□□ -1.12
TGFB1-202ENST00000597453 IGKV3D-7A0A0C4DH55 119 aa8.04□□□□□ -1.12
TGFB1-202ENST00000597453 COX7CP15954 63 aa8.03□□□□□ -1.12
TGFB1-202ENST00000597453 LORP23490 312 aaPredicted RBP8.03□□□□□ -1.12
TGFB1-202ENST00000597453 KRTAP10-6P60371 365 aaPredicted RBP8.02□□□□□ -1.13
TGFB1-202ENST00000597453 Q96NJ1 140 aa8.02□□□□□ -1.13
TGFB1-202ENST00000597453 A0A1B0GW54 56 aa8.01□□□□□ -1.13
TGFB1-202ENST00000597453 CXCL6P80162 114 aa8.01□□□□□ -1.13
TGFB1-202ENST00000597453 SERP2Q8N6R1 65 aa7.99□□□□□ -1.13
TGFB1-202ENST00000597453 Q6ZVQ6 151 aa7.98□□□□□ -1.13
TGFB1-202ENST00000597453 M0R2T5 61 aa7.97□□□□□ -1.13
TGFB1-202ENST00000597453 COX6B2Q6YFQ2 88 aa7.97□□□□□ -1.13
TGFB1-202ENST00000597453 SMIM20Q8N5G0 67 aa7.95□□□□□ -1.14
TGFB1-202ENST00000597453 A0A087WVE0 104 aa7.94□□□□□ -1.14
TGFB1-202ENST00000597453 LINC00472Q9H8W2 130 aa7.94□□□□□ -1.14
TGFB1-202ENST00000597453 IGKV4-1P06312 121 aa7.93□□□□□ -1.14
TGFB1-202ENST00000597453 Q75L30 129 aa7.91□□□□□ -1.14
TGFB1-202ENST00000597453 DEFB116Q30KQ4 102 aa7.88□□□□□ -1.15
TGFB1-202ENST00000597453 TRAV7A0A075B6U4 112 aa7.87□□□□□ -1.15
TGFB1-202ENST00000597453 DSCR10P59022 87 aa7.87□□□□□ -1.15
TGFB1-202ENST00000597453 ATP11AUNQ6ZP68 121 aa7.87□□□□□ -1.15
TGFB1-202ENST00000597453 C20orf166-AS1Q96NR2 134 aa7.87□□□□□ -1.15
TGFB1-202ENST00000597453 TMEM258P61165 79 aa7.86□□□□□ -1.15
TGFB1-202ENST00000597453 J3KT08 172 aa7.85□□□□□ -1.15
TGFB1-202ENST00000597453 LINC00313P59037 77 aa7.85□□□□□ -1.15
TGFB1-202ENST00000597453 A8MUU9 505 aa7.84□□□□□ -1.15
TGFB1-202ENST00000597453 NREPQ16612 68 aa7.84□□□□□ -1.15
TGFB1-202ENST00000597453 IGHV6-1A0A0B4J1U7 121 aa7.82□□□□□ -1.16
TGFB1-202ENST00000597453 A0A1B0GVX0 72 aa7.82□□□□□ -1.16
TGFB1-202ENST00000597453 KRTAP16-1A8MUX0 517 aa7.81□□□□□ -1.16
TGFB1-202ENST00000597453 C8orf87E5RJ46 101 aa7.8□□□□□ -1.16
TGFB1-202ENST00000597453 RPS28P62857 69 aaKnown RBP7.8□□□□□ -1.16
TGFB1-202ENST00000597453 NOTCH2NLQ7Z3S9 236 aa7.8□□□□□ -1.16
TGFB1-202ENST00000597453 BPY2O14599 106 aa7.79□□□□□ -1.16
TGFB1-202ENST00000597453 KLKP1Q107X0 134 aa7.77□□□□□ -1.17
TGFB1-202ENST00000597453 NDUFB1O75438 58 aa7.76□□□□□ -1.17
TGFB1-202ENST00000597453 A8MWP4 228 aa7.75□□□□□ -1.17
TGFB1-202ENST00000597453 NDUFC1O43677 76 aa7.75□□□□□ -1.17
TGFB1-202ENST00000597453 C20orf197Q8N268 126 aa7.73□□□□□ -1.17
TGFB1-202ENST00000597453 CYSTM1Q9H1C7 97 aa7.73□□□□□ -1.17
TGFB1-202ENST00000597453 USH2AO75445 5202 aa7.72□□□□□ -1.17
TGFB1-202ENST00000597453 SSPOA2VEC9 5147 aa7.71□□□□□ -1.17
TGFB1-202ENST00000597453 KRTAP9-8Q9BYQ0 159 aa7.7□□□□□ -1.18
TGFB1-202ENST00000597453 OCR1Q9BZK8 76 aa7.7□□□□□ -1.18
TGFB1-202ENST00000597453 ATP5EP56381 51 aaPredicted RBP7.69□□□□□ -1.18
TGFB1-202ENST00000597453 C8orf17Q9NRJ1 99 aa7.69□□□□□ -1.18
TGFB1-202ENST00000597453 H7BZZ5 65 aa7.68□□□□□ -1.18
TGFB1-202ENST00000597453 PRR15Q8IV56 129 aa7.68□□□□□ -1.18
TGFB1-202ENST00000597453 FAM236DA0A1B0GTK5 79 aa7.67□□□□□ -1.18
TGFB1-202ENST00000597453 FAM236CP0DP71 79 aa7.67□□□□□ -1.18
TGFB1-202ENST00000597453 Q8N9L7 120 aa7.66□□□□□ -1.18
TGFB1-202ENST00000597453 Q8N9P0 234 aaPredicted RBP7.65□□□□□ -1.18
TGFB1-202ENST00000597453 TMEM254Q8TBM7 123 aa7.64□□□□□ -1.19
TGFB1-202ENST00000597453 K7EQZ3 153 aa7.63□□□□□ -1.19
TGFB1-202ENST00000597453 MMP24-AS1A0A0U1RRL7 71 aa7.62□□□□□ -1.19
TGFB1-202ENST00000597453 ZCCHC13Q8WW36 166 aaKnown RBP7.61□□□□□ -1.19
TGFB1-202ENST00000597453 SERP1Q9Y6X1 66 aa7.61□□□□□ -1.19
TGFB1-202ENST00000597453 HCG22E2RYF7 251 aa7.6□□□□□ -1.19
TGFB1-202ENST00000597453 SNURFQ9Y675 71 aa7.59□□□□□ -1.19
TGFB1-202ENST00000597453 MT2AP02795 61 aa7.58□□□□□ -1.2
TGFB1-202ENST00000597453 HRES1P13985 223 aa7.58□□□□□ -1.2
TGFB1-202ENST00000597453 MPLKIPQ8TAP9 179 aa7.58□□□□□ -1.2
TGFB1-202ENST00000597453 MRPL34Q9BQ48 92 aaKnown RBP7.58□□□□□ -1.2
TGFB1-202ENST00000597453 hDV103S1A0JD37 113 aa7.56□□□□□ -1.2
TGFB1-202ENST00000597453 C5orf47Q569G3 176 aa7.56□□□□□ -1.2
TGFB1-202ENST00000597453 SVIPQ8NHG7 77 aa7.54□□□□□ -1.2
TGFB1-202ENST00000597453 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.53□□□□□ -1.2
TGFB1-202ENST00000597453 MT1FP04733 61 aa7.52□□□□□ -1.21
TGFB1-202ENST00000597453 RBM12B-AS1Q9P1G2 102 aa7.52□□□□□ -1.21
TGFB1-202ENST00000597453 FCGBPQ9Y6R7 5405 aaPredicted RBP7.51□□□□□ -1.21
TGFB1-202ENST00000597453 H3BPC8 53 aa7.5□□□□□ -1.21
TGFB1-202ENST00000597453 SPINK7P58062 85 aa7.49□□□□□ -1.21
TGFB1-202ENST00000597453 CASC2Q6XLA1 102 aa7.49□□□□□ -1.21
TGFB1-202ENST00000597453 KRTAP9-7A8MTY7 169 aa7.48□□□□□ -1.21
TGFB1-202ENST00000597453 LCE2BO14633 110 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms