RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 A8MUU9 505 aa7.22□□□□□ -1.25
APOC1-208ENST00000592535 DSCR10P59022 87 aa7.22□□□□□ -1.25
APOC1-208ENST00000592535 SIGMAR1Q99720 223 aa7.22□□□□□ -1.25
APOC1-208ENST00000592535 LOC110117498A0A087WWA1 95 aa7.21□□□□□ -1.26
APOC1-208ENST00000592535 KRTAP10-6P60371 365 aaPredicted RBP7.21□□□□□ -1.26
APOC1-208ENST00000592535 LORP23490 312 aaPredicted RBP7.2□□□□□ -1.26
APOC1-208ENST00000592535 M0R2T5 61 aa7.19□□□□□ -1.26
APOC1-208ENST00000592535 CCKP06307 115 aa7.19□□□□□ -1.26
APOC1-208ENST00000592535 IGKV4-1P06312 121 aa7.19□□□□□ -1.26
APOC1-208ENST00000592535 PDE6GP18545 87 aa7.19□□□□□ -1.26
APOC1-208ENST00000592535 Q6ZQT0 140 aa7.19□□□□□ -1.26
APOC1-208ENST00000592535 DSCR8Q96T75 97 aa7.18□□□□□ -1.26
APOC1-208ENST00000592535 C14orf132Q9NPU4 83 aa7.18□□□□□ -1.26
APOC1-208ENST00000592535 DEFB116Q30KQ4 102 aa7.16□□□□□ -1.26
APOC1-208ENST00000592535 LINC00472Q9H8W2 130 aa7.16□□□□□ -1.26
APOC1-208ENST00000592535 FLGP20930 4061 aaPredicted RBP7.16□□□□□ -1.26
APOC1-208ENST00000592535 KRTAP16-1A8MUX0 517 aa7.15□□□□□ -1.26
APOC1-208ENST00000592535 LINC00313P59037 77 aa7.15□□□□□ -1.26
APOC1-208ENST00000592535 C21orf62-AS1Q17RA5 79 aa7.14□□□□□ -1.27
APOC1-208ENST00000592535 NOTCH2NLQ7Z3S9 236 aa7.14□□□□□ -1.27
APOC1-208ENST00000592535 VPS25Q9BRG1 176 aa7.14□□□□□ -1.27
APOC1-208ENST00000592535 A0A1B0GW54 56 aa7.12□□□□□ -1.27
APOC1-208ENST00000592535 IGHV6-1A0A0B4J1U7 121 aa7.09□□□□□ -1.27
APOC1-208ENST00000592535 CRCT1Q9UGL9 99 aa7.08□□□□□ -1.28
APOC1-208ENST00000592535 FAM240AA0A1B0GVK7 77 aa7.07□□□□□ -1.28
APOC1-208ENST00000592535 A0A1B0GVX0 72 aa7.05□□□□□ -1.28
APOC1-208ENST00000592535 ACYP1P07311 99 aa7.05□□□□□ -1.28
APOC1-208ENST00000592535 C8orf87E5RJ46 101 aa7.04□□□□□ -1.28
APOC1-208ENST00000592535 J3QR89 54 aa7.04□□□□□ -1.28
APOC1-208ENST00000592535 LINC00846Q9NV44 126 aa7.04□□□□□ -1.28
APOC1-208ENST00000592535 K7ERU9 68 aa7.02□□□□□ -1.29
APOC1-208ENST00000592535 J3KT08 172 aa7.01□□□□□ -1.29
APOC1-208ENST00000592535 HRES1P13985 223 aa6.99□□□□□ -1.29
APOC1-208ENST00000592535 FSIP2Q5CZC0 6907 aa6.99□□□□□ -1.29
APOC1-208ENST00000592535 FAM236DA0A1B0GTK5 79 aa6.98□□□□□ -1.29
APOC1-208ENST00000592535 FAM236CP0DP71 79 aa6.98□□□□□ -1.29
APOC1-208ENST00000592535 Q6ZVQ6 151 aa6.98□□□□□ -1.29
APOC1-208ENST00000592535 MPLKIPQ8TAP9 179 aa6.98□□□□□ -1.29
APOC1-208ENST00000592535 NREPQ16612 68 aa6.97□□□□□ -1.29
APOC1-208ENST00000592535 NDUFB1O75438 58 aa6.95□□□□□ -1.3
APOC1-208ENST00000592535 ZCCHC13Q8WW36 166 aaKnown RBP6.95□□□□□ -1.3
APOC1-208ENST00000592535 KRTAP9-8Q9BYQ0 159 aa6.95□□□□□ -1.3
APOC1-208ENST00000592535 UBL5Q9BZL1 73 aa6.95□□□□□ -1.3
APOC1-208ENST00000592535 RBM12B-AS1Q9P1G2 102 aa6.95□□□□□ -1.3
APOC1-208ENST00000592535 A8MWP4 228 aa6.93□□□□□ -1.3
APOC1-208ENST00000592535 C8orf17Q9NRJ1 99 aa6.93□□□□□ -1.3
APOC1-208ENST00000592535 LINC00643Q86TS7 51 aa6.92□□□□□ -1.3
APOC1-208ENST00000592535 Q8N9P0 234 aaPredicted RBP6.92□□□□□ -1.3
APOC1-208ENST00000592535 IGKV3D-7A0A0C4DH55 119 aa6.91□□□□□ -1.3
APOC1-208ENST00000592535 SPINK7P58062 85 aa6.89□□□□□ -1.31
APOC1-208ENST00000592535 BPY2O14599 106 aa6.88□□□□□ -1.31
APOC1-208ENST00000592535 CXCL6P80162 114 aa6.88□□□□□ -1.31
APOC1-208ENST00000592535 MT2AP02795 61 aa6.86□□□□□ -1.31
APOC1-208ENST00000592535 PRR15Q8IV56 129 aa6.86□□□□□ -1.31
APOC1-208ENST00000592535 ATP5EP2Q5VTU8 51 aa6.85□□□□□ -1.31
APOC1-208ENST00000592535 MMP24-AS1A0A0U1RRL7 71 aa6.83□□□□□ -1.32
APOC1-208ENST00000592535 MT-ATP8P03928 68 aa6.81□□□□□ -1.32
APOC1-208ENST00000592535 MT1FP04733 61 aa6.81□□□□□ -1.32
APOC1-208ENST00000592535 TMEM254Q8TBM7 123 aa6.81□□□□□ -1.32
APOC1-208ENST00000592535 MRPL34Q9BQ48 92 aaKnown RBP6.81□□□□□ -1.32
APOC1-208ENST00000592535 K7EQZ3 153 aa6.8□□□□□ -1.32
APOC1-208ENST00000592535 WFDC13Q8IUB5 93 aa6.8□□□□□ -1.32
APOC1-208ENST00000592535 Q8N9L7 120 aa6.8□□□□□ -1.32
APOC1-208ENST00000592535 IMUPQ9GZP8 106 aa6.79□□□□□ -1.32
APOC1-208ENST00000592535 hDV103S1A0JD37 113 aa6.77□□□□□ -1.33
APOC1-208ENST00000592535 NDUFS5O43920 106 aa6.75□□□□□ -1.33
APOC1-208ENST00000592535 KRTAP10-10P60014 251 aa6.75□□□□□ -1.33
APOC1-208ENST00000592535 KRTAP9-3Q9BYQ3 159 aa6.73□□□□□ -1.33
APOC1-208ENST00000592535 HIST1H4AP62805 103 aaKnown RBP6.72□□□□□ -1.33
APOC1-208ENST00000592535 A0A087WVE0 104 aa6.71□□□□□ -1.34
APOC1-208ENST00000592535 LCE2BO14633 110 aa6.71□□□□□ -1.34
APOC1-208ENST00000592535 USH2AO75445 5202 aa6.71□□□□□ -1.34
APOC1-208ENST00000592535 HCG22E2RYF7 251 aa6.69□□□□□ -1.34
APOC1-208ENST00000592535 Q5W150 140 aa6.68□□□□□ -1.34
APOC1-208ENST00000592535 CASC2Q6XLA1 102 aa6.67□□□□□ -1.34
APOC1-208ENST00000592535 SSPOA2VEC9 5147 aa6.67□□□□□ -1.34
APOC1-208ENST00000592535 IGKV2D-30A0A075B6S6 120 aa6.66□□□□□ -1.34
APOC1-208ENST00000592535 IGKV2-30P06310 120 aa6.66□□□□□ -1.34
APOC1-208ENST00000592535 H1FX-AS1Q4G0G2 97 aa6.64□□□□□ -1.35
APOC1-208ENST00000592535 C7orf65Q6ZTY9 151 aa6.64□□□□□ -1.35
APOC1-208ENST00000592535 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.61□□□□□ -1.35
APOC1-208ENST00000592535 KRTAP19-1Q8IUB9 90 aa6.6□□□□□ -1.35
APOC1-208ENST00000592535 FAM236AA0A1B0GUQ0 79 aa6.59□□□□□ -1.35
APOC1-208ENST00000592535 FAM236BA0A1B0GV22 79 aa6.59□□□□□ -1.35
APOC1-208ENST00000592535 OCR1Q9BZK8 76 aa6.58□□□□□ -1.36
APOC1-208ENST00000592535 SCGB1A1P11684 91 aa6.56□□□□□ -1.36
APOC1-208ENST00000592535 TP53AIP1Q9HCN2 124 aa6.56□□□□□ -1.36
APOC1-208ENST00000592535 C4orf26Q17RF5 130 aa6.55□□□□□ -1.36
APOC1-208ENST00000592535 KRTAP9-7A8MTY7 169 aa6.52□□□□□ -1.37
APOC1-208ENST00000592535 ATOX1O00244 68 aa6.52□□□□□ -1.37
APOC1-208ENST00000592535 UQCRQO14949 82 aa6.52□□□□□ -1.37
APOC1-208ENST00000592535 SMIM20Q8N5G0 67 aa6.52□□□□□ -1.37
APOC1-208ENST00000592535 TRAV7A0A075B6U4 112 aa6.51□□□□□ -1.37
APOC1-208ENST00000592535 FCGBPQ9Y6R7 5405 aaPredicted RBP6.5□□□□□ -1.37
APOC1-208ENST00000592535 KRTAP19-6Q3LI70 58 aa6.47□□□□□ -1.37
APOC1-208ENST00000592535 C5orf47Q569G3 176 aa6.46□□□□□ -1.38
APOC1-208ENST00000592535 SERP2Q8N6R1 65 aa6.46□□□□□ -1.38
APOC1-208ENST00000592535 KRTAP3-1Q9BYR8 98 aa6.46□□□□□ -1.38
APOC1-208ENST00000592535 TRAV22A0A0B4J277 110 aa6.44□□□□□ -1.38
APOC1-208ENST00000592535 H0Y9P7 68 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms