RNA–Protein interactions for RNA: ENST00000589949.1

H3F3B-209, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 842 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-209ENST00000589949 C14orf132Q9NPU4 83 aa9.38□□□□□ -0.91
H3F3B-209ENST00000589949 DSCR8Q96T75 97 aa9.37□□□□□ -0.91
H3F3B-209ENST00000589949 LOC110117498A0A087WWA1 95 aa9.36□□□□□ -0.91
H3F3B-209ENST00000589949 PDE6GP18545 87 aa9.36□□□□□ -0.91
H3F3B-209ENST00000589949 Q75L30 129 aa9.36□□□□□ -0.91
H3F3B-209ENST00000589949 TRBV7-4A0A0J9YYF1 115 aa9.35□□□□□ -0.91
H3F3B-209ENST00000589949 K7ERU9 68 aa9.35□□□□□ -0.91
H3F3B-209ENST00000589949 C21orf62-AS1Q17RA5 79 aa9.34□□□□□ -0.91
H3F3B-209ENST00000589949 Q6ZQT0 140 aa9.33□□□□□ -0.92
H3F3B-209ENST00000589949 CCKP06307 115 aa9.32□□□□□ -0.92
H3F3B-209ENST00000589949 ATP11AUNQ6ZP68 121 aa9.31□□□□□ -0.92
H3F3B-209ENST00000589949 Q6Q795 121 aa9.29□□□□□ -0.92
H3F3B-209ENST00000589949 Q96NJ1 140 aa9.29□□□□□ -0.92
H3F3B-209ENST00000589949 ACYP1P07311 99 aa9.28□□□□□ -0.92
H3F3B-209ENST00000589949 FAM240AA0A1B0GVK7 77 aa9.27□□□□□ -0.93
H3F3B-209ENST00000589949 C20orf166-AS1Q96NR2 134 aa9.26□□□□□ -0.93
H3F3B-209ENST00000589949 A0A1W2PNM2 257 aa9.24□□□□□ -0.93
H3F3B-209ENST00000589949 VPS25Q9BRG1 176 aa9.24□□□□□ -0.93
H3F3B-209ENST00000589949 A0A1B0GW54 56 aa9.23□□□□□ -0.93
H3F3B-209ENST00000589949 A8MUU9 505 aa9.23□□□□□ -0.93
H3F3B-209ENST00000589949 A0A087WSZ3 146 aa9.22□□□□□ -0.93
H3F3B-209ENST00000589949 SS18L2Q9UHA2 77 aa9.22□□□□□ -0.93
H3F3B-209ENST00000589949 KRTAP9-8Q9BYQ0 159 aa9.19□□□□□ -0.94
H3F3B-209ENST00000589949 DSCR10P59022 87 aa9.18□□□□□ -0.94
H3F3B-209ENST00000589949 LINC00846Q9NV44 126 aa9.18□□□□□ -0.94
H3F3B-209ENST00000589949 KRTAP16-1A8MUX0 517 aa9.17□□□□□ -0.94
H3F3B-209ENST00000589949 UBL5Q9BZL1 73 aa9.13□□□□□ -0.95
H3F3B-209ENST00000589949 NOTCH2NLQ7Z3S9 236 aa9.1□□□□□ -0.95
H3F3B-209ENST00000589949 NREPQ16612 68 aa9.09□□□□□ -0.95
H3F3B-209ENST00000589949 Q6ZVQ6 151 aa9.09□□□□□ -0.95
H3F3B-209ENST00000589949 LINC00643Q86TS7 51 aa9.09□□□□□ -0.95
H3F3B-209ENST00000589949 SIGMAR1Q99720 223 aa9.09□□□□□ -0.95
H3F3B-209ENST00000589949 USH2AO75445 5202 aa9.06□□□□□ -0.96
H3F3B-209ENST00000589949 IGKV4-1P06312 121 aa9.05□□□□□ -0.96
H3F3B-209ENST00000589949 LINC00313P59037 77 aa9.05□□□□□ -0.96
H3F3B-209ENST00000589949 DEFB116Q30KQ4 102 aa9.05□□□□□ -0.96
H3F3B-209ENST00000589949 LINC00472Q9H8W2 130 aa9.03□□□□□ -0.96
H3F3B-209ENST00000589949 MT2AP02795 61 aa9.02□□□□□ -0.97
H3F3B-209ENST00000589949 ATP5EP2Q5VTU8 51 aa9.02□□□□□ -0.97
H3F3B-209ENST00000589949 MPLKIPQ8TAP9 179 aa9.02□□□□□ -0.97
H3F3B-209ENST00000589949 SSPOA2VEC9 5147 aa9.02□□□□□ -0.97
H3F3B-209ENST00000589949 HRES1P13985 223 aa9.01□□□□□ -0.97
H3F3B-209ENST00000589949 MT-ATP8P03928 68 aa8.99□□□□□ -0.97
H3F3B-209ENST00000589949 CXCL6P80162 114 aa8.99□□□□□ -0.97
H3F3B-209ENST00000589949 IGKV3D-7A0A0C4DH55 119 aa8.98□□□□□ -0.97
H3F3B-209ENST00000589949 BPY2O14599 106 aa8.98□□□□□ -0.97
H3F3B-209ENST00000589949 LCE2BO14633 110 aa8.98□□□□□ -0.97
H3F3B-209ENST00000589949 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.96□□□□□ -0.98
H3F3B-209ENST00000589949 MT1FP04733 61 aa8.96□□□□□ -0.98
H3F3B-209ENST00000589949 IGHV6-1A0A0B4J1U7 121 aa8.95□□□□□ -0.98
H3F3B-209ENST00000589949 FAM236DA0A1B0GTK5 79 aa8.94□□□□□ -0.98
H3F3B-209ENST00000589949 J3KT08 172 aa8.94□□□□□ -0.98
H3F3B-209ENST00000589949 FAM236CP0DP71 79 aa8.94□□□□□ -0.98
H3F3B-209ENST00000589949 IMUPQ9GZP8 106 aa8.94□□□□□ -0.98
H3F3B-209ENST00000589949 KRTAP9-3Q9BYQ3 159 aa8.9□□□□□ -0.98
H3F3B-209ENST00000589949 KRTAP9-7A8MTY7 169 aa8.88□□□□□ -0.99
H3F3B-209ENST00000589949 HIST1H4AP62805 103 aaKnown RBP8.88□□□□□ -0.99
H3F3B-209ENST00000589949 RBM12B-AS1Q9P1G2 102 aa8.88□□□□□ -0.99
H3F3B-209ENST00000589949 A0A1B0GVX0 72 aa8.87□□□□□ -0.99
H3F3B-209ENST00000589949 A8MWP4 228 aa8.87□□□□□ -0.99
H3F3B-209ENST00000589949 NDUFB1O75438 58 aa8.85□□□□□ -0.99
H3F3B-209ENST00000589949 FCGBPQ9Y6R7 5405 aaPredicted RBP8.85□□□□□ -0.99
H3F3B-209ENST00000589949 K7EQZ3 153 aa8.84□□□□□ -0.99
H3F3B-209ENST00000589949 KRTAP10-10P60014 251 aa8.84□□□□□ -0.99
H3F3B-209ENST00000589949 Q8N9L7 120 aa8.84□□□□□ -0.99
H3F3B-209ENST00000589949 C8orf87E5RJ46 101 aa8.83□□□□□ -1
H3F3B-209ENST00000589949 PRR15Q8IV56 129 aa8.83□□□□□ -1
H3F3B-209ENST00000589949 KRTAP19-1Q8IUB9 90 aa8.82□□□□□ -1
H3F3B-209ENST00000589949 ZCCHC13Q8WW36 166 aaKnown RBP8.81□□□□□ -1
H3F3B-209ENST00000589949 A0A087WVE0 104 aa8.8□□□□□ -1
H3F3B-209ENST00000589949 SPINK7P58062 85 aa8.79□□□□□ -1
H3F3B-209ENST00000589949 SCGB1A1P11684 91 aa8.77□□□□□ -1.01
H3F3B-209ENST00000589949 Q8N9P0 234 aaPredicted RBP8.75□□□□□ -1.01
H3F3B-209ENST00000589949 HCG22E2RYF7 251 aa8.74□□□□□ -1.01
H3F3B-209ENST00000589949 FAM236AA0A1B0GUQ0 79 aa8.73□□□□□ -1.01
H3F3B-209ENST00000589949 FAM236BA0A1B0GV22 79 aa8.73□□□□□ -1.01
H3F3B-209ENST00000589949 C8orf17Q9NRJ1 99 aa8.73□□□□□ -1.01
H3F3B-209ENST00000589949 MMP24-AS1A0A0U1RRL7 71 aa8.72□□□□□ -1.01
H3F3B-209ENST00000589949 CASC2Q6XLA1 102 aa8.69□□□□□ -1.02
H3F3B-209ENST00000589949 WFDC13Q8IUB5 93 aa8.69□□□□□ -1.02
H3F3B-209ENST00000589949 hDV103S1A0JD37 113 aa8.68□□□□□ -1.02
H3F3B-209ENST00000589949 TMEM254Q8TBM7 123 aa8.66□□□□□ -1.02
H3F3B-209ENST00000589949 ATOX1O00244 68 aa8.65□□□□□ -1.02
H3F3B-209ENST00000589949 MRPL34Q9BQ48 92 aaKnown RBP8.63□□□□□ -1.03
H3F3B-209ENST00000589949 SMIM20Q8N5G0 67 aa8.61□□□□□ -1.03
H3F3B-209ENST00000589949 KRTAP19-6Q3LI70 58 aa8.59□□□□□ -1.03
H3F3B-209ENST00000589949 ANAPC13Q9BS18 74 aa8.56□□□□□ -1.04
H3F3B-209ENST00000589949 OCR1Q9BZK8 76 aa8.56□□□□□ -1.04
H3F3B-209ENST00000589949 TRAV7A0A075B6U4 112 aa8.55□□□□□ -1.04
H3F3B-209ENST00000589949 SERP2Q8N6R1 65 aa8.54□□□□□ -1.04
H3F3B-209ENST00000589949 TP53AIP1Q9HCN2 124 aa8.54□□□□□ -1.04
H3F3B-209ENST00000589949 NDUFS5O43920 106 aa8.53□□□□□ -1.04
H3F3B-209ENST00000589949 UQCRQO14949 82 aa8.52□□□□□ -1.05
H3F3B-209ENST00000589949 COX7CP15954 63 aa8.48□□□□□ -1.05
H3F3B-209ENST00000589949 MACF1Q9UPN3 7388 aaKnown RBP8.48□□□□□ -1.05
H3F3B-209ENST00000589949 H1FX-AS1Q4G0G2 97 aa8.47□□□□□ -1.05
H3F3B-209ENST00000589949 C5orf47Q569G3 176 aa8.46□□□□□ -1.06
H3F3B-209ENST00000589949 PCP4P48539 62 aa8.45□□□□□ -1.06
H3F3B-209ENST00000589949 Q5W150 140 aa8.45□□□□□ -1.06
H3F3B-209ENST00000589949 TRAV22A0A0B4J277 110 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms